RNA–Protein interactions for RNA: ENST00000616288.4

PPP4R3B-205, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-205ENST00000616288 BMP8BP34820 402 aa12.63□□□□□ -0.39
PPP4R3B-205ENST00000616288 OR3A2P47893 321 aa12.63□□□□□ -0.39
PPP4R3B-205ENST00000616288 TTC3P53804 2025 aa12.63□□□□□ -0.39
PPP4R3B-205ENST00000616288 ACTA2P62736 377 aa12.63□□□□□ -0.39
PPP4R3B-205ENST00000616288 ACTG2P63267 376 aa12.63□□□□□ -0.39
PPP4R3B-205ENST00000616288 ACTC1P68032 377 aa12.63□□□□□ -0.39
PPP4R3B-205ENST00000616288 ACTA1P68133 377 aa12.63□□□□□ -0.39
PPP4R3B-205ENST00000616288 OR2F1Q13607 317 aa12.63□□□□□ -0.39
PPP4R3B-205ENST00000616288 SYPL1Q16563 259 aa12.63□□□□□ -0.39
PPP4R3B-205ENST00000616288 TPGS1Q6ZTW0 290 aa12.63□□□□□ -0.39
PPP4R3B-205ENST00000616288 ACOT7LQ6ZUV0 252 aa12.63□□□□□ -0.39
PPP4R3B-205ENST00000616288 BMP8AQ7Z5Y6 402 aa12.63□□□□□ -0.39
PPP4R3B-205ENST00000616288 SMIM4Q8WVI0 70 aa12.63□□□□□ -0.39
PPP4R3B-205ENST00000616288 ZNF707Q96C28 371 aaPredicted RBP12.63□□□□□ -0.39
PPP4R3B-205ENST00000616288 TRIM2Q9C040 744 aa12.63□□□□□ -0.39
PPP4R3B-205ENST00000616288 MVB12BQ9H7P6 319 aa12.63□□□□□ -0.39
PPP4R3B-205ENST00000616288 VSX1Q9NZR4 365 aaPredicted RBP12.63□□□□□ -0.39
PPP4R3B-205ENST00000616288 EFCAB7A8K855 629 aa12.63□□□□□ -0.39
PPP4R3B-205ENST00000616288 MPTX1A8MV57 137 aa12.63□□□□□ -0.39
PPP4R3B-205ENST00000616288 CACNB4O00305 520 aaPredicted RBP12.63□□□□□ -0.39
PPP4R3B-205ENST00000616288 ARAFP10398 606 aa12.63□□□□□ -0.39
PPP4R3B-205ENST00000616288 PRF1P14222 555 aa12.63□□□□□ -0.39
PPP4R3B-205ENST00000616288 DNASE1L1P49184 302 aa12.63□□□□□ -0.39
PPP4R3B-205ENST00000616288 MMP15P51511 669 aa12.63□□□□□ -0.39
PPP4R3B-205ENST00000616288 ACTBP60709 375 aa12.63□□□□□ -0.39
PPP4R3B-205ENST00000616288 ACTG1P63261 375 aa12.63□□□□□ -0.39
PPP4R3B-205ENST00000616288 UBXN2BQ14CS0 331 aa12.63□□□□□ -0.39
PPP4R3B-205ENST00000616288 TEAD2Q15562 447 aa12.63□□□□□ -0.39
PPP4R3B-205ENST00000616288 TCEAL5Q5H9L2 206 aa12.63□□□□□ -0.39
PPP4R3B-205ENST00000616288 LIPJQ5W064 366 aa12.63□□□□□ -0.39
PPP4R3B-205ENST00000616288 ZNF660Q6AZW8 331 aaPredicted RBP12.63□□□□□ -0.39
PPP4R3B-205ENST00000616288 TGIF2LXQ8IUE1 241 aa12.63□□□□□ -0.39
PPP4R3B-205ENST00000616288 THOC3Q96J01 351 aaKnown RBP12.63□□□□□ -0.39
PPP4R3B-205ENST00000616288 DERL3Q96Q80 235 aa12.63□□□□□ -0.39
PPP4R3B-205ENST00000616288 CLCC1Q96S66 551 aa12.63□□□□□ -0.39
PPP4R3B-205ENST00000616288 TMEM27Q9HBJ8 222 aa12.63□□□□□ -0.39
PPP4R3B-205ENST00000616288 NPFFR2Q9Y5X5 522 aa12.63□□□□□ -0.39
PPP4R3B-205ENST00000616288 TSPAN11A1L157 253 aa12.62□□□□□ -0.39
PPP4R3B-205ENST00000616288 RNASET2O00584 256 aaKnown RBP12.62□□□□□ -0.39
PPP4R3B-205ENST00000616288 CXCL14O95715 111 aa12.62□□□□□ -0.39
PPP4R3B-205ENST00000616288 GNALP38405 381 aa12.62□□□□□ -0.39
PPP4R3B-205ENST00000616288 STXBP1P61764 594 aaKnown RBP12.62□□□□□ -0.39
PPP4R3B-205ENST00000616288 CBFBQ13951 182 aa12.62□□□□□ -0.39
PPP4R3B-205ENST00000616288 ELAVL1Q15717 326 aaKnown RBP12.62□□□□□ -0.39
PPP4R3B-205ENST00000616288 SERINC5Q86VE9 423 aa12.62□□□□□ -0.39
PPP4R3B-205ENST00000616288 HORMAD2Q8N7B1 307 aa12.62□□□□□ -0.39
PPP4R3B-205ENST00000616288 TEX19Q8NA77 164 aa12.62□□□□□ -0.39
PPP4R3B-205ENST00000616288 PCSK9Q8NBP7 692 aaKnown RBP12.62□□□□□ -0.39
PPP4R3B-205ENST00000616288 SLC38A5Q8WUX1 472 aa12.62□□□□□ -0.39
PPP4R3B-205ENST00000616288 TLNRD1Q9H1K6 362 aa12.62□□□□□ -0.39
PPP4R3B-205ENST00000616288 CALML5Q9NZT1 146 aa12.62□□□□□ -0.39
PPP4R3B-205ENST00000616288 ADAM18Q9Y3Q7 739 aa12.62□□□□□ -0.39
PPP4R3B-205ENST00000616288 ZNF587BE7ETH6 402 aa12.62□□□□□ -0.39
PPP4R3B-205ENST00000616288 K7EPK0 472 aa12.62□□□□□ -0.39
PPP4R3B-205ENST00000616288 CLDN11O75508 207 aa12.62□□□□□ -0.39
PPP4R3B-205ENST00000616288 SCAF4O95104 1147 aaKnown RBP12.62□□□□□ -0.39
PPP4R3B-205ENST00000616288 F2P00734 622 aa12.62□□□□□ -0.39
PPP4R3B-205ENST00000616288 RHOP08100 348 aa12.62□□□□□ -0.39
PPP4R3B-205ENST00000616288 SUOXP51687 545 aa12.62□□□□□ -0.39
PPP4R3B-205ENST00000616288 ZNF140P52738 457 aaPredicted RBP12.62□□□□□ -0.39
PPP4R3B-205ENST00000616288 OR2A2Q6IF42 318 aa12.62□□□□□ -0.39
PPP4R3B-205ENST00000616288 C17orf64Q86WR6 236 aa12.62□□□□□ -0.39
PPP4R3B-205ENST00000616288 ARL14Q8N4G2 192 aa12.62□□□□□ -0.39
PPP4R3B-205ENST00000616288 FAM71E2Q8N5Q1 922 aa12.62□□□□□ -0.39
PPP4R3B-205ENST00000616288 BBS1Q8NFJ9 593 aa12.62□□□□□ -0.39
PPP4R3B-205ENST00000616288 OR4K17Q8NGC6 315 aa12.62□□□□□ -0.39
PPP4R3B-205ENST00000616288 NPRL2Q8WTW4 380 aa12.62□□□□□ -0.39
PPP4R3B-205ENST00000616288 SYT17Q9BSW7 474 aa12.62□□□□□ -0.39
PPP4R3B-205ENST00000616288 POFUT1Q9H488 388 aa12.62□□□□□ -0.39
PPP4R3B-205ENST00000616288 NEUROD4Q9HD90 331 aa12.62□□□□□ -0.39
PPP4R3B-205ENST00000616288 UQCC1Q9NVA1 299 aa12.62□□□□□ -0.39
PPP4R3B-205ENST00000616288 TINAGQ9UJW2 476 aa12.62□□□□□ -0.39
PPP4R3B-205ENST00000616288 FBXL4Q9UKA2 621 aa12.62□□□□□ -0.39
PPP4R3B-205ENST00000616288 SNRPGP15A8MWD9 76 aa12.62□□□□□ -0.39
PPP4R3B-205ENST00000616288 TGOLN2O43493 480 aa12.62□□□□□ -0.39
PPP4R3B-205ENST00000616288 SCN2BO60939 215 aa12.62□□□□□ -0.39
PPP4R3B-205ENST00000616288 ICOSLGO75144 302 aa12.62□□□□□ -0.39
PPP4R3B-205ENST00000616288 RAG2P55895 527 aa12.62□□□□□ -0.39
PPP4R3B-205ENST00000616288 UBE2KP61086 200 aa12.62□□□□□ -0.39
PPP4R3B-205ENST00000616288 SOHLH1Q5JUK2 328 aa12.62□□□□□ -0.39
PPP4R3B-205ENST00000616288 BAP18Q8IXM2 172 aa12.62□□□□□ -0.39
PPP4R3B-205ENST00000616288 OR13C9Q8NGT0 318 aa12.62□□□□□ -0.39
PPP4R3B-205ENST00000616288 OR2G2Q8NGZ5 317 aa12.62□□□□□ -0.39
PPP4R3B-205ENST00000616288 KPTNQ9Y664 436 aa12.62□□□□□ -0.39
PPP4R3B-205ENST00000616288 FAM171A2A8MVW0 826 aa12.61□□□□□ -0.39
PPP4R3B-205ENST00000616288 OR8U9P0C7N5 309 aa12.61□□□□□ -0.39
PPP4R3B-205ENST00000616288 LIMS3P0CW19 117 aa12.61□□□□□ -0.39
PPP4R3B-205ENST00000616288 LIMS4P0CW20 117 aa12.61□□□□□ -0.39
PPP4R3B-205ENST00000616288 C1GALT1C1LP0DN25 315 aa12.61□□□□□ -0.39
PPP4R3B-205ENST00000616288 PGGHGQ32M88 737 aa12.61□□□□□ -0.39
PPP4R3B-205ENST00000616288 HIST2H3PS2Q5TEC6 136 aa12.61□□□□□ -0.39
PPP4R3B-205ENST00000616288 TECPR1Q7Z6L1 1165 aa12.61□□□□□ -0.39
PPP4R3B-205ENST00000616288 BPIFB2Q8N4F0 458 aa12.61□□□□□ -0.39
PPP4R3B-205ENST00000616288 CHTF18Q8WVB6 975 aa12.61□□□□□ -0.39
PPP4R3B-205ENST00000616288 PPP1R1CQ8WVI7 109 aa12.61□□□□□ -0.39
PPP4R3B-205ENST00000616288 NXPE3Q969Y0 559 aa12.61□□□□□ -0.39
PPP4R3B-205ENST00000616288 PDCD1LG2Q9BQ51 273 aa12.61□□□□□ -0.39
PPP4R3B-205ENST00000616288 ZMAT3Q9HA38 289 aaKnown RBP12.61□□□□□ -0.39
PPP4R3B-205ENST00000616288 BCO1Q9HAY6 547 aa12.61□□□□□ -0.39
PPP4R3B-205ENST00000616288 ZNF729A6NN14 1252 aaPredicted RBP12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms