RNA–Protein interactions for RNA: ENST00000612856.4

FAM3A-221, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 3,995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-221ENST00000612856 PCDHGB1Q9Y5G3 927 aa10.06□□□□□ -0.8
FAM3A-221ENST00000612856 IDSB3KWA1 339 aa10.06□□□□□ -0.8
FAM3A-221ENST00000612856 J3KTA2 159 aa10.06□□□□□ -0.8
FAM3A-221ENST00000612856 TP53I11O14683 189 aa10.06□□□□□ -0.8
FAM3A-221ENST00000612856 KCNJ13O60928 360 aa10.06□□□□□ -0.8
FAM3A-221ENST00000612856 SIX6O95475 246 aa10.06□□□□□ -0.8
FAM3A-221ENST00000612856 S100A6P06703 90 aa10.06□□□□□ -0.8
FAM3A-221ENST00000612856 ACPPP15309 386 aa10.06□□□□□ -0.8
FAM3A-221ENST00000612856 RAB3BP20337 219 aa10.06□□□□□ -0.8
FAM3A-221ENST00000612856 HOXC12P31275 282 aa10.06□□□□□ -0.8
FAM3A-221ENST00000612856 GGT2P36268 569 aa10.06□□□□□ -0.8
FAM3A-221ENST00000612856 MAGEA2P43356 314 aa10.06□□□□□ -0.8
FAM3A-221ENST00000612856 DCDP81605 110 aaKnown RBP10.06□□□□□ -0.8
FAM3A-221ENST00000612856 DPTQ07507 201 aa10.06□□□□□ -0.8
FAM3A-221ENST00000612856 ARHGAP19Q14CB8 494 aa10.06□□□□□ -0.8
FAM3A-221ENST00000612856 OR2G6Q5TZ20 316 aa10.06□□□□□ -0.8
FAM3A-221ENST00000612856 SFRP4Q6FHJ7 346 aaPredicted RBP10.06□□□□□ -0.8
FAM3A-221ENST00000612856 SAMD12Q8N8I0 201 aa10.06□□□□□ -0.8
FAM3A-221ENST00000612856 PROKR2Q8NFJ6 384 aa10.06□□□□□ -0.8
FAM3A-221ENST00000612856 STT3BQ8TCJ2 826 aa10.06□□□□□ -0.8
FAM3A-221ENST00000612856 TCTN2Q96GX1 697 aa10.06□□□□□ -0.8
FAM3A-221ENST00000612856 CHD5Q8TDI0 1954 aa10.06□□□□□ -0.8
FAM3A-221ENST00000612856 ANKRD36A6QL64 1941 aa10.06□□□□□ -0.8
FAM3A-221ENST00000612856 USF3Q68DE3 2245 aa10.05□□□□□ -0.8
FAM3A-221ENST00000612856 A0A1W2PPK0 400 aa10.05□□□□□ -0.8
FAM3A-221ENST00000612856 RGS11O94810 467 aa10.05□□□□□ -0.8
FAM3A-221ENST00000612856 GPR75O95800 540 aa10.05□□□□□ -0.8
FAM3A-221ENST00000612856 IFNGP01579 166 aa10.05□□□□□ -0.8
FAM3A-221ENST00000612856 PCSK2P16519 638 aa10.05□□□□□ -0.8
FAM3A-221ENST00000612856 PSPHP78330 225 aa10.05□□□□□ -0.8
FAM3A-221ENST00000612856 TEKQ02763 1124 aa10.05□□□□□ -0.8
FAM3A-221ENST00000612856 GAS6Q14393 721 aa10.05□□□□□ -0.8
FAM3A-221ENST00000612856 PTGES3Q15185 160 aaKnown RBP10.05□□□□□ -0.8
FAM3A-221ENST00000612856 VRK2Q86Y07 508 aa10.05□□□□□ -0.8
FAM3A-221ENST00000612856 OR6M1Q8NGM8 313 aa10.05□□□□□ -0.8
FAM3A-221ENST00000612856 SENP5Q96HI0 755 aaPredicted RBP10.05□□□□□ -0.8
FAM3A-221ENST00000612856 GINS4Q9BRT9 223 aa10.05□□□□□ -0.8
FAM3A-221ENST00000612856 SLC6A15Q9H2J7 730 aa10.05□□□□□ -0.8
FAM3A-221ENST00000612856 FAM60AQ9NP50 221 aa10.05□□□□□ -0.8
FAM3A-221ENST00000612856 STUB1Q9UNE7 303 aa10.05□□□□□ -0.8
FAM3A-221ENST00000612856 POFUT2Q9Y2G5 429 aa10.05□□□□□ -0.8
FAM3A-221ENST00000612856 PATJQ8NI35 1801 aa10.05□□□□□ -0.8
FAM3A-221ENST00000612856 TNFRSF10CO14798 259 aa10.05□□□□□ -0.8
FAM3A-221ENST00000612856 GMDSO60547 372 aa10.05□□□□□ -0.8
FAM3A-221ENST00000612856 PUM1Q14671 1186 aaKnown RBP eCLIP10.05□□□□□ -0.8
FAM3A-221ENST00000612856 KLHL22Q53GT1 634 aa10.05□□□□□ -0.8
FAM3A-221ENST00000612856 TOMM5Q8N4H5 51 aa10.05□□□□□ -0.8
FAM3A-221ENST00000612856 AMER3Q8N944 861 aa10.05□□□□□ -0.8
FAM3A-221ENST00000612856 THEM6Q8WUY1 208 aa10.05□□□□□ -0.8
FAM3A-221ENST00000612856 TMEM80Q96HE8 168 aa10.05□□□□□ -0.8
FAM3A-221ENST00000612856 SFXN2Q96NB2 322 aa10.05□□□□□ -0.8
FAM3A-221ENST00000612856 SERINC2Q96SA4 455 aa10.05□□□□□ -0.8
FAM3A-221ENST00000612856 GPER1Q99527 375 aa10.05□□□□□ -0.8
FAM3A-221ENST00000612856 EPHX3Q9H6B9 360 aa10.05□□□□□ -0.8
FAM3A-221ENST00000612856 APMAPQ9HDC9 416 aa10.05□□□□□ -0.8
FAM3A-221ENST00000612856 PRDM9Q9NQV7 894 aa10.05□□□□□ -0.8
FAM3A-221ENST00000612856 SNRNP200O75643 2136 aaKnown RBP10.05□□□□□ -0.8
FAM3A-221ENST00000612856 COL4A6Q14031 1691 aa10.05□□□□□ -0.8
FAM3A-221ENST00000612856 GPR89AB7ZAQ6 455 aa10.05□□□□□ -0.8
FAM3A-221ENST00000612856 PCDH17O14917 1159 aa10.05□□□□□ -0.8
FAM3A-221ENST00000612856 RAD1O60671 282 aa10.05□□□□□ -0.8
FAM3A-221ENST00000612856 GPR89BP0CG08 455 aa10.05□□□□□ -0.8
FAM3A-221ENST00000612856 ZNF823P16415 610 aa10.05□□□□□ -0.8
FAM3A-221ENST00000612856 SGCAQ16586 387 aa10.05□□□□□ -0.8
FAM3A-221ENST00000612856 ZNF630Q2M218 657 aaPredicted RBP10.05□□□□□ -0.8
FAM3A-221ENST00000612856 ALG10BQ5I7T1 473 aa10.05□□□□□ -0.8
FAM3A-221ENST00000612856 TMEM65Q6PI78 240 aa10.05□□□□□ -0.8
FAM3A-221ENST00000612856 KIAA1958Q8N8K9 716 aa10.05□□□□□ -0.8
FAM3A-221ENST00000612856 OR56A3Q8NH54 315 aa10.05□□□□□ -0.8
FAM3A-221ENST00000612856 GEMIN6Q8WXD5 167 aaKnown RBP10.05□□□□□ -0.8
FAM3A-221ENST00000612856 CCDC74BQ96LY2 380 aa10.05□□□□□ -0.8
FAM3A-221ENST00000612856 CACNG6Q9BXT2 260 aa10.05□□□□□ -0.8
FAM3A-221ENST00000612856 TWSG1Q9GZX9 223 aa10.05□□□□□ -0.8
FAM3A-221ENST00000612856 CTSFQ9UBX1 484 aa10.05□□□□□ -0.8
FAM3A-221ENST00000612856 LOXL2Q9Y4K0 774 aa10.05□□□□□ -0.8
FAM3A-221ENST00000612856 PCYT1BQ9Y5K3 369 aaPredicted RBP10.05□□□□□ -0.8
FAM3A-221ENST00000612856 MPDZO75970 2070 aa10.05□□□□□ -0.8
FAM3A-221ENST00000612856 CSO75390 466 aaKnown RBP10.04□□□□□ -0.8
FAM3A-221ENST00000612856 RLN1P04808 185 aa10.04□□□□□ -0.8
FAM3A-221ENST00000612856 BMP8BP34820 402 aa10.04□□□□□ -0.8
FAM3A-221ENST00000612856 ZXDAP98168 799 aa10.04□□□□□ -0.8
FAM3A-221ENST00000612856 PLAG1Q6DJT9 500 aa10.04□□□□□ -0.8
FAM3A-221ENST00000612856 FAM220AQ7Z4H9 259 aa10.04□□□□□ -0.8
FAM3A-221ENST00000612856 BMP8AQ7Z5Y6 402 aa10.04□□□□□ -0.8
FAM3A-221ENST00000612856 C10orf111Q8N326 155 aa10.04□□□□□ -0.8
FAM3A-221ENST00000612856 CNEP1R1Q8N9A8 125 aa10.04□□□□□ -0.8
FAM3A-221ENST00000612856 NEIL3Q8TAT5 605 aa10.04□□□□□ -0.8
FAM3A-221ENST00000612856 NXPE2Q96DL1 559 aa10.04□□□□□ -0.8
FAM3A-221ENST00000612856 ARL6Q9H0F7 186 aa10.04□□□□□ -0.8
FAM3A-221ENST00000612856 SEMA6CQ9H3T2 930 aa10.04□□□□□ -0.8
FAM3A-221ENST00000612856 FOLH1BQ9HBA9 442 aa10.04□□□□□ -0.8
FAM3A-221ENST00000612856 SRPK3Q9UPE1 567 aa10.04□□□□□ -0.8
FAM3A-221ENST00000612856 PDCD5O14737 125 aa10.04□□□□□ -0.8
FAM3A-221ENST00000612856 GPR37L1O60883 481 aa10.04□□□□□ -0.8
FAM3A-221ENST00000612856 CTSVO60911 334 aa10.04□□□□□ -0.8
FAM3A-221ENST00000612856 WISP3O95389 354 aaPredicted RBP10.04□□□□□ -0.8
FAM3A-221ENST00000612856 IGHV3-9P01782 118 aa10.04□□□□□ -0.8
FAM3A-221ENST00000612856 C1QCP02747 245 aa10.04□□□□□ -0.8
FAM3A-221ENST00000612856 CD3GP09693 182 aa10.04□□□□□ -0.8
FAM3A-221ENST00000612856 DRD2P14416 443 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms