RNA–Protein interactions for RNA: ENST00000611848.1

SMAD4-217, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-217ENST00000611848 ADAP00813 363 aa8.03□□□□□ -1.12
SMAD4-217ENST00000611848 GASTP01350 101 aa8.03□□□□□ -1.12
SMAD4-217ENST00000611848 IGKV1D-16P01601 117 aa8.03□□□□□ -1.12
SMAD4-217ENST00000611848 NGFRP08138 427 aa8.03□□□□□ -1.12
SMAD4-217ENST00000611848 MAP2K4P45985 399 aa8.03□□□□□ -1.12
SMAD4-217ENST00000611848 CRISP3P54108 245 aa8.03□□□□□ -1.12
SMAD4-217ENST00000611848 HPCAP84074 193 aa8.03□□□□□ -1.12
SMAD4-217ENST00000611848 FUT5Q11128 374 aa8.03□□□□□ -1.12
SMAD4-217ENST00000611848 GNA13Q14344 377 aa8.03□□□□□ -1.12
SMAD4-217ENST00000611848 GANABQ14697 944 aaKnown RBP8.03□□□□□ -1.12
SMAD4-217ENST00000611848 SLC10A1Q14973 349 aa8.03□□□□□ -1.12
SMAD4-217ENST00000611848 CTF1Q16619 201 aa8.03□□□□□ -1.12
SMAD4-217ENST00000611848 DCST2Q5T1A1 773 aa8.03□□□□□ -1.12
SMAD4-217ENST00000611848 ATAD3BQ5T9A4 648 aa8.03□□□□□ -1.12
SMAD4-217ENST00000611848 UBE2UQ5VVX9 321 aa8.03□□□□□ -1.12
SMAD4-217ENST00000611848 TIGD3Q6B0B8 471 aa8.03□□□□□ -1.12
SMAD4-217ENST00000611848 FIGNL1Q6PIW4 674 aa8.03□□□□□ -1.12
SMAD4-217ENST00000611848 GFRALQ6UXV0 394 aa8.03□□□□□ -1.12
SMAD4-217ENST00000611848 Q6ZPB1 254 aaPredicted RBP8.03□□□□□ -1.12
SMAD4-217ENST00000611848 KRT73Q86Y46 540 aa8.03□□□□□ -1.12
SMAD4-217ENST00000611848 TMEM251Q8N6I4 163 aa8.03□□□□□ -1.12
SMAD4-217ENST00000611848 AQP11Q8NBQ7 271 aa8.03□□□□□ -1.12
SMAD4-217ENST00000611848 OR4D11Q8NGI4 311 aa8.03□□□□□ -1.12
SMAD4-217ENST00000611848 OR5D16Q8NGK9 328 aa8.03□□□□□ -1.12
SMAD4-217ENST00000611848 OR1J4Q8NGS1 313 aa8.03□□□□□ -1.12
SMAD4-217ENST00000611848 TBC1D15Q8TC07 691 aa8.03□□□□□ -1.12
SMAD4-217ENST00000611848 XAGE5Q8WWM1 108 aa8.03□□□□□ -1.12
SMAD4-217ENST00000611848 RORBQ92753 470 aa8.03□□□□□ -1.12
SMAD4-217ENST00000611848 CDS1Q92903 461 aa8.03□□□□□ -1.12
SMAD4-217ENST00000611848 YIPF6Q96EC8 236 aa8.03□□□□□ -1.12
SMAD4-217ENST00000611848 RHNO1Q9BSD3 238 aa8.03□□□□□ -1.12
SMAD4-217ENST00000611848 SPATA5L1Q9BVQ7 753 aa8.03□□□□□ -1.12
SMAD4-217ENST00000611848 DGCR6LQ9BY27 220 aa8.03□□□□□ -1.12
SMAD4-217ENST00000611848 HOXD1Q9GZZ0 328 aa8.03□□□□□ -1.12
SMAD4-217ENST00000611848 TSPAN10Q9H1Z9 355 aaPredicted RBP8.03□□□□□ -1.12
SMAD4-217ENST00000611848 NMNAT1Q9HAN9 279 aaPredicted RBP8.03□□□□□ -1.12
SMAD4-217ENST00000611848 ACOT13Q9NPJ3 140 aa8.03□□□□□ -1.12
SMAD4-217ENST00000611848 SDHAF3Q9NRP4 125 aa8.03□□□□□ -1.12
SMAD4-217ENST00000611848 WIF1Q9Y5W5 379 aa8.03□□□□□ -1.12
SMAD4-217ENST00000611848 MED12Q93074 2177 aa8.02□□□□□ -1.13
SMAD4-217ENST00000611848 SPTBN1Q01082 2364 aaKnown RBP8.02□□□□□ -1.13
SMAD4-217ENST00000611848 A0A0G2JPF8 293 aa8.02□□□□□ -1.13
SMAD4-217ENST00000611848 ZAR1LA6NP61 321 aa8.02□□□□□ -1.13
SMAD4-217ENST00000611848 CLCA1A8K7I4 914 aa8.02□□□□□ -1.13
SMAD4-217ENST00000611848 FAM166BA8MTA8 275 aa8.02□□□□□ -1.13
SMAD4-217ENST00000611848 HNRNPCL2B2RXH8 293 aa8.02□□□□□ -1.13
SMAD4-217ENST00000611848 HNRNPCL3B7ZW38 293 aa8.02□□□□□ -1.13
SMAD4-217ENST00000611848 FAAHO00519 579 aa8.02□□□□□ -1.13
SMAD4-217ENST00000611848 GNB5O14775 395 aa8.02□□□□□ -1.13
SMAD4-217ENST00000611848 BCAS1O75363 584 aaPredicted RBP8.02□□□□□ -1.13
SMAD4-217ENST00000611848 CBR3O75828 277 aa8.02□□□□□ -1.13
SMAD4-217ENST00000611848 GABARAPO95166 117 aa8.02□□□□□ -1.13
SMAD4-217ENST00000611848 UTS2O95399 124 aa8.02□□□□□ -1.13
SMAD4-217ENST00000611848 H1F0P07305 194 aaKnown RBP8.02□□□□□ -1.13
SMAD4-217ENST00000611848 CHRM4P08173 479 aa8.02□□□□□ -1.13
SMAD4-217ENST00000611848 GUSBP08236 651 aa8.02□□□□□ -1.13
SMAD4-217ENST00000611848 INHBBP09529 407 aa8.02□□□□□ -1.13
SMAD4-217ENST00000611848 HNRNPCL4P0DMR1 293 aa8.02□□□□□ -1.13
SMAD4-217ENST00000611848 NR2F1P10589 423 aa8.02□□□□□ -1.13
SMAD4-217ENST00000611848 ZNF182P17025 639 aaPredicted RBP8.02□□□□□ -1.13
SMAD4-217ENST00000611848 TBXA2RP21731 343 aa8.02□□□□□ -1.13
SMAD4-217ENST00000611848 GNLYP22749 145 aa8.02□□□□□ -1.13
SMAD4-217ENST00000611848 MAGEA5P43359 124 aa8.02□□□□□ -1.13
SMAD4-217ENST00000611848 CRISP1P54107 249 aa8.02□□□□□ -1.13
SMAD4-217ENST00000611848 GAS1P54826 345 aa8.02□□□□□ -1.13
SMAD4-217ENST00000611848 SMIM11AP58511 58 aa8.02□□□□□ -1.13
SMAD4-217ENST00000611848 MRPL49Q13405 166 aaKnown RBP8.02□□□□□ -1.13
SMAD4-217ENST00000611848 AQP6Q13520 282 aa8.02□□□□□ -1.13
SMAD4-217ENST00000611848 PTGES3Q15185 160 aaKnown RBP8.02□□□□□ -1.13
SMAD4-217ENST00000611848 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.02□□□□□ -1.13
SMAD4-217ENST00000611848 ARHGAP11BQ3KRB8 267 aa8.02□□□□□ -1.13
SMAD4-217ENST00000611848 CCNJQ5T5M9 372 aa8.02□□□□□ -1.13
SMAD4-217ENST00000611848 FNDC7Q5VTL7 733 aa8.02□□□□□ -1.13
SMAD4-217ENST00000611848 HEPHL1Q6MZM0 1159 aa8.02□□□□□ -1.13
SMAD4-217ENST00000611848 KLHL17Q6TDP4 642 aa8.02□□□□□ -1.13
SMAD4-217ENST00000611848 PLCZ1Q86YW0 608 aa8.02□□□□□ -1.13
SMAD4-217ENST00000611848 RBM45Q8IUH3 476 aaKnown RBP8.02□□□□□ -1.13
SMAD4-217ENST00000611848 P3H2Q8IVL5 708 aa8.02□□□□□ -1.13
SMAD4-217ENST00000611848 CCDC103Q8IW40 242 aa8.02□□□□□ -1.13
SMAD4-217ENST00000611848 FAM81AQ8TBF8 368 aa8.02□□□□□ -1.13
SMAD4-217ENST00000611848 OTUB1Q96FW1 271 aaPredicted RBP8.02□□□□□ -1.13
SMAD4-217ENST00000611848 HS3ST6Q96QI5 342 aa8.02□□□□□ -1.13
SMAD4-217ENST00000611848 WFDC6Q9BQY6 131 aa8.02□□□□□ -1.13
SMAD4-217ENST00000611848 TBL1XR1Q9BZK7 514 aa8.02□□□□□ -1.13
SMAD4-217ENST00000611848 UBQLN3Q9H347 655 aa8.02□□□□□ -1.13
SMAD4-217ENST00000611848 ZNF703Q9H7S9 590 aaPredicted RBP8.02□□□□□ -1.13
SMAD4-217ENST00000611848 PLGRKTQ9HBL7 147 aa8.02□□□□□ -1.13
SMAD4-217ENST00000611848 GALNT9Q9HCQ5 603 aa8.02□□□□□ -1.13
SMAD4-217ENST00000611848 ACKR4Q9NPB9 350 aa8.02□□□□□ -1.13
SMAD4-217ENST00000611848 UBQLN4Q9NRR5 601 aa8.02□□□□□ -1.13
SMAD4-217ENST00000611848 RHCGQ9UBD6 479 aa8.02□□□□□ -1.13
SMAD4-217ENST00000611848 REV1Q9UBZ9 1251 aa8.02□□□□□ -1.13
SMAD4-217ENST00000611848 WARS2Q9UGM6 360 aaKnown RBP8.02□□□□□ -1.13
SMAD4-217ENST00000611848 TMCC3Q9ULS5 477 aa8.02□□□□□ -1.13
SMAD4-217ENST00000611848 A4GNTQ9UNA3 340 aa8.02□□□□□ -1.13
SMAD4-217ENST00000611848 MGAT4BQ9UQ53 548 aa8.02□□□□□ -1.13
SMAD4-217ENST00000611848 KCNE3Q9Y6H6 103 aa8.02□□□□□ -1.13
SMAD4-217ENST00000611848 HEATR5AQ86XA9 2040 aa8.01□□□□□ -1.13
SMAD4-217ENST00000611848 A0A1B0GVG6 124 aa8.01□□□□□ -1.13
SMAD4-217ENST00000611848 A0A1W2PQD3 144 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms