RNA–Protein interactions for RNA: ENST00000608532.1

HDDC2-207, Transcript of HD domain containing 2, humanhuman

TSL 3

Gene HDDC2, Length 553 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-207ENST00000608532 TSNARE1Q96NA8 513 aa2.39□□□□□ -2.03
HDDC2-207ENST00000608532 SELENOIQ9C0D9 397 aa2.39□□□□□ -2.03
HDDC2-207ENST00000608532 NXF5Q9H1B4 397 aaKnown RBP2.39□□□□□ -2.03
HDDC2-207ENST00000608532 NGBQ9NPG2 151 aa2.39□□□□□ -2.03
HDDC2-207ENST00000608532 SLC25A37Q9NYZ2 338 aa2.39□□□□□ -2.03
HDDC2-207ENST00000608532 ATP10DQ9P241 1426 aa2.39□□□□□ -2.03
HDDC2-207ENST00000608532 FRMPD4Q14CM0 1322 aa2.39□□□□□ -2.03
HDDC2-207ENST00000608532 IGKV1D-8A0A087WSZ0 117 aa2.38□□□□□ -2.03
HDDC2-207ENST00000608532 PPIAL4CA0A0B4J2A2 164 aa2.38□□□□□ -2.03
HDDC2-207ENST00000608532 A0A0G2JLM5 398 aa2.38□□□□□ -2.03
HDDC2-207ENST00000608532 A0A0G2JN53 185 aa2.38□□□□□ -2.03
HDDC2-207ENST00000608532 RNF103-CHMP3A0A140T963 221 aa2.38□□□□□ -2.03
HDDC2-207ENST00000608532 HIP1O00291 1037 aa2.38□□□□□ -2.03
HDDC2-207ENST00000608532 PTBP3O95758 552 aaKnown RBP2.38□□□□□ -2.03
HDDC2-207ENST00000608532 MT-ND3P03897 115 aa2.38□□□□□ -2.03
HDDC2-207ENST00000608532 PPIAL4GP0DN37 164 aa2.38□□□□□ -2.03
HDDC2-207ENST00000608532 CXCR2P25025 360 aa2.38□□□□□ -2.03
HDDC2-207ENST00000608532 YWHABP31946 246 aaKnown RBP2.38□□□□□ -2.03
HDDC2-207ENST00000608532 SHMT2P34897 504 aa2.38□□□□□ -2.03
HDDC2-207ENST00000608532 RABIFP47224 123 aa2.38□□□□□ -2.03
HDDC2-207ENST00000608532 ZNF763Q0D2J5 394 aa2.38□□□□□ -2.03
HDDC2-207ENST00000608532 C11orf71Q6IPW1 123 aa2.38□□□□□ -2.03
HDDC2-207ENST00000608532 SYT10Q6XYQ8 523 aa2.38□□□□□ -2.03
HDDC2-207ENST00000608532 CATSPER4Q7RTX7 472 aa2.38□□□□□ -2.03
HDDC2-207ENST00000608532 DENND6BQ8NEG7 585 aa2.38□□□□□ -2.03
HDDC2-207ENST00000608532 NPBQ8NG41 125 aa2.38□□□□□ -2.03
HDDC2-207ENST00000608532 FGF11Q92914 225 aa2.38□□□□□ -2.03
HDDC2-207ENST00000608532 C12orf66Q96MD2 445 aa2.38□□□□□ -2.03
HDDC2-207ENST00000608532 TMEM237Q96Q45 408 aa2.38□□□□□ -2.03
HDDC2-207ENST00000608532 GPR61Q9BZJ8 451 aa2.38□□□□□ -2.03
HDDC2-207ENST00000608532 RHBGQ9H310 441 aa2.38□□□□□ -2.03
HDDC2-207ENST00000608532 CDC42EP4Q9H3Q1 356 aaKnown RBP2.38□□□□□ -2.03
HDDC2-207ENST00000608532 SMYD3Q9H7B4 428 aa2.38□□□□□ -2.03
HDDC2-207ENST00000608532 DMAP1Q9NPF5 467 aaPredicted RBP2.38□□□□□ -2.03
HDDC2-207ENST00000608532 SMPD3Q9NY59 655 aaPredicted RBP2.38□□□□□ -2.03
HDDC2-207ENST00000608532 AATFQ9NY61 560 aaKnown RBP eCLIP2.38□□□□□ -2.03
HDDC2-207ENST00000608532 PPIAL4EA0A075B759 164 aa2.37□□□□□ -2.03
HDDC2-207ENST00000608532 IGHV1OR21-1A0A087WYE8 117 aa2.37□□□□□ -2.03
HDDC2-207ENST00000608532 A0A1B0GUS0 222 aa2.37□□□□□ -2.03
HDDC2-207ENST00000608532 PPIAL4DF5H284 164 aa2.37□□□□□ -2.03
HDDC2-207ENST00000608532 G3V4G9 280 aa2.37□□□□□ -2.03
HDDC2-207ENST00000608532 RETP07949 1114 aa2.37□□□□□ -2.03
HDDC2-207ENST00000608532 MRPL3P09001 348 aaKnown RBP2.37□□□□□ -2.03
HDDC2-207ENST00000608532 PPIAL4FP0DN26 164 aa2.37□□□□□ -2.03
HDDC2-207ENST00000608532 PSMA2P25787 234 aa2.37□□□□□ -2.03
HDDC2-207ENST00000608532 FMO3P31513 532 aa2.37□□□□□ -2.03
HDDC2-207ENST00000608532 ATP6V1E1P36543 226 aa2.37□□□□□ -2.03
HDDC2-207ENST00000608532 ASMTP46597 345 aa2.37□□□□□ -2.03
HDDC2-207ENST00000608532 CNTN2Q02246 1040 aa2.37□□□□□ -2.03
HDDC2-207ENST00000608532 FAM83EQ2M2I3 478 aa2.37□□□□□ -2.03
HDDC2-207ENST00000608532 SLC10A5Q5PT55 438 aa2.37□□□□□ -2.03
HDDC2-207ENST00000608532 TIGD3Q6B0B8 471 aa2.37□□□□□ -2.03
HDDC2-207ENST00000608532 CTRB2Q6GPI1 263 aa2.37□□□□□ -2.03
HDDC2-207ENST00000608532 RAB12Q6IQ22 244 aa2.37□□□□□ -2.03
HDDC2-207ENST00000608532 LRRC8BQ6P9F7 803 aa2.37□□□□□ -2.03
HDDC2-207ENST00000608532 GDPD3Q7L5L3 318 aa2.37□□□□□ -2.03
HDDC2-207ENST00000608532 CCDC54Q8NEL0 328 aa2.37□□□□□ -2.03
HDDC2-207ENST00000608532 OR10G3Q8NGC4 313 aa2.37□□□□□ -2.03
HDDC2-207ENST00000608532 DTX3LQ8TDB6 740 aa2.37□□□□□ -2.03
HDDC2-207ENST00000608532 FAM111AQ96PZ2 611 aa2.37□□□□□ -2.03
HDDC2-207ENST00000608532 P2RY13Q9BPV8 354 aa2.37□□□□□ -2.03
HDDC2-207ENST00000608532 FICDQ9BVA6 458 aa2.37□□□□□ -2.03
HDDC2-207ENST00000608532 IFI27L2Q9H2X8 130 aa2.37□□□□□ -2.03
HDDC2-207ENST00000608532 CLMPQ9H6B4 373 aa2.37□□□□□ -2.03
HDDC2-207ENST00000608532 ZDHHC4Q9NPG8 344 aa2.37□□□□□ -2.03
HDDC2-207ENST00000608532 LHX9Q9NQ69 397 aa2.37□□□□□ -2.03
HDDC2-207ENST00000608532 CHMP2BQ9UQN3 213 aa2.37□□□□□ -2.03
HDDC2-207ENST00000608532 COL1A2P08123 1366 aa2.36□□□□□ -2.03
HDDC2-207ENST00000608532 CLDN5O00501 218 aa2.36□□□□□ -2.03
HDDC2-207ENST00000608532 AGPAT2O15120 278 aa2.36□□□□□ -2.03
HDDC2-207ENST00000608532 SS18L1O75177 396 aaPredicted RBP2.36□□□□□ -2.03
HDDC2-207ENST00000608532 POLR2EP19388 210 aaKnown RBP2.36□□□□□ -2.03
HDDC2-207ENST00000608532 PGCP20142 388 aa2.36□□□□□ -2.03
HDDC2-207ENST00000608532 TPSB2P20231 275 aa2.36□□□□□ -2.03
HDDC2-207ENST00000608532 TBXA2RP21731 343 aa2.36□□□□□ -2.03
HDDC2-207ENST00000608532 DNAJB1P25685 340 aa2.36□□□□□ -2.03
HDDC2-207ENST00000608532 HPCAL1P37235 193 aa2.36□□□□□ -2.03
HDDC2-207ENST00000608532 DAP3P51398 398 aaKnown RBP2.36□□□□□ -2.03
HDDC2-207ENST00000608532 DLX1P56177 255 aa2.36□□□□□ -2.03
HDDC2-207ENST00000608532 TPSAB1Q15661 275 aa2.36□□□□□ -2.03
HDDC2-207ENST00000608532 GPRC6AQ5T6X5 926 aa2.36□□□□□ -2.03
HDDC2-207ENST00000608532 FRMPD2BQ6IN97 320 aa2.36□□□□□ -2.03
HDDC2-207ENST00000608532 ISLR2Q6UXK2 745 aa2.36□□□□□ -2.03
HDDC2-207ENST00000608532 CAMK2N1Q7Z7J9 78 aa2.36□□□□□ -2.03
HDDC2-207ENST00000608532 C12orf56Q8IXR9 622 aa2.36□□□□□ -2.03
HDDC2-207ENST00000608532 RDH10Q8IZV5 341 aa2.36□□□□□ -2.03
HDDC2-207ENST00000608532 DEDD2Q8WXF8 326 aa2.36□□□□□ -2.03
HDDC2-207ENST00000608532 MRPS31Q92665 395 aaKnown RBP2.36□□□□□ -2.03
HDDC2-207ENST00000608532 FCRL1Q96LA6 429 aa2.36□□□□□ -2.03
HDDC2-207ENST00000608532 SLC35A5Q9BS91 424 aa2.36□□□□□ -2.03
HDDC2-207ENST00000608532 POLR1EQ9GZS1 481 aaKnown RBP2.36□□□□□ -2.03
HDDC2-207ENST00000608532 FOLH1BQ9HBA9 442 aa2.36□□□□□ -2.03
HDDC2-207ENST00000608532 NINJ2Q9NZG7 142 aa2.36□□□□□ -2.03
HDDC2-207ENST00000608532 HEBP2Q9Y5Z4 205 aa2.36□□□□□ -2.03
HDDC2-207ENST00000608532 ABCC9O60706 1549 aa2.36□□□□□ -2.03
HDDC2-207ENST00000608532 SH3TC1Q8TE82 1336 aa2.36□□□□□ -2.03
HDDC2-207ENST00000608532 DCTN6O00399 190 aa2.35□□□□□ -2.03
HDDC2-207ENST00000608532 RS1O15537 224 aa2.35□□□□□ -2.03
HDDC2-207ENST00000608532 MBTPS2O43462 519 aa2.35□□□□□ -2.03
HDDC2-207ENST00000608532 LANCL1O43813 399 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms