RNA–Protein interactions for RNA: ENST00000604922.1

SH3D19-213, Transcript of SH3 domain containing 19, humanhuman

TSL 2

Gene SH3D19, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-213ENST00000604922 ADPGKQ9BRR6 497 aa3.34□□□□□ -1.87
SH3D19-213ENST00000604922 FUNDC2Q9BWH2 189 aa3.34□□□□□ -1.87
SH3D19-213ENST00000604922 GLT8D2Q9H1C3 349 aa3.34□□□□□ -1.87
SH3D19-213ENST00000604922 ZWILCHQ9H900 591 aa3.34□□□□□ -1.87
SH3D19-213ENST00000604922 DDX28Q9NUL7 540 aaKnown RBP3.34□□□□□ -1.87
SH3D19-213ENST00000604922 ABCB8Q9NUT2 735 aa3.34□□□□□ -1.87
SH3D19-213ENST00000604922 WRAP73Q9P2S5 460 aaPredicted RBP3.34□□□□□ -1.87
SH3D19-213ENST00000604922 AKAP6Q13023 2319 aa3.34□□□□□ -1.87
SH3D19-213ENST00000604922 NBEAL2Q6ZNJ1 2754 aa3.33□□□□□ -1.88
SH3D19-213ENST00000604922 SMCO2A6NFE2 343 aa3.33□□□□□ -1.88
SH3D19-213ENST00000604922 G3V3Y1 287 aa3.33□□□□□ -1.88
SH3D19-213ENST00000604922 TLR4O00206 839 aa3.33□□□□□ -1.88
SH3D19-213ENST00000604922 CACNG3O60359 315 aa3.33□□□□□ -1.88
SH3D19-213ENST00000604922 UGT1A5P35504 534 aa3.33□□□□□ -1.88
SH3D19-213ENST00000604922 NAPAP54920 295 aa3.33□□□□□ -1.88
SH3D19-213ENST00000604922 WNT4P56705 351 aa3.33□□□□□ -1.88
SH3D19-213ENST00000604922 SMARCB1Q12824 385 aa3.33□□□□□ -1.88
SH3D19-213ENST00000604922 EIF3IQ13347 325 aaKnown RBP3.33□□□□□ -1.88
SH3D19-213ENST00000604922 KLF5Q13887 457 aaPredicted RBP3.33□□□□□ -1.88
SH3D19-213ENST00000604922 FAM133BQ5BKY9 247 aaKnown RBP3.33□□□□□ -1.88
SH3D19-213ENST00000604922 ZNF544Q6NX49 715 aa3.33□□□□□ -1.88
SH3D19-213ENST00000604922 C11orf88Q6PI97 169 aa3.33□□□□□ -1.88
SH3D19-213ENST00000604922 TICAM2Q86XR7 235 aa3.33□□□□□ -1.88
SH3D19-213ENST00000604922 GOT1L1Q8NHS2 421 aaPredicted RBP3.33□□□□□ -1.88
SH3D19-213ENST00000604922 SCFD1Q8WVM8 642 aa3.33□□□□□ -1.88
SH3D19-213ENST00000604922 OTUB2Q96DC9 234 aa3.33□□□□□ -1.88
SH3D19-213ENST00000604922 KIR2DL4Q99706 377 aa3.33□□□□□ -1.88
SH3D19-213ENST00000604922 DDX50Q9BQ39 737 aaKnown RBP3.33□□□□□ -1.88
SH3D19-213ENST00000604922 COPS7BQ9H9Q2 264 aaPredicted RBP3.33□□□□□ -1.88
SH3D19-213ENST00000604922 GRPEL1Q9HAV7 217 aa3.33□□□□□ -1.88
SH3D19-213ENST00000604922 MAGEF1Q9HAY2 307 aa3.33□□□□□ -1.88
SH3D19-213ENST00000604922 SGK2Q9HBY8 427 aa3.33□□□□□ -1.88
SH3D19-213ENST00000604922 VPS54Q9P1Q0 977 aa3.33□□□□□ -1.88
SH3D19-213ENST00000604922 RPS6KB2Q9UBS0 482 aa3.33□□□□□ -1.88
SH3D19-213ENST00000604922 DIMT1Q9UNQ2 313 aaKnown RBP3.33□□□□□ -1.88
SH3D19-213ENST00000604922 ANK2Q01484 3957 aa3.33□□□□□ -1.88
SH3D19-213ENST00000604922 NPIPA5A0A0B4J1W7 369 aa3.32□□□□□ -1.88
SH3D19-213ENST00000604922 ERICH2A1L162 156 aa3.32□□□□□ -1.88
SH3D19-213ENST00000604922 LRRIQ4A6NIV6 560 aa3.32□□□□□ -1.88
SH3D19-213ENST00000604922 NPIPA5E9PKD4 350 aa3.32□□□□□ -1.88
SH3D19-213ENST00000604922 TYROBPO43914 113 aa3.32□□□□□ -1.88
SH3D19-213ENST00000604922 SDC3O75056 442 aa3.32□□□□□ -1.88
SH3D19-213ENST00000604922 OLFM2O95897 454 aa3.32□□□□□ -1.88
SH3D19-213ENST00000604922 ACTL6AO96019 429 aa3.32□□□□□ -1.88
SH3D19-213ENST00000604922 CISD3P0C7P0 127 aa3.32□□□□□ -1.88
SH3D19-213ENST00000604922 CD82P27701 267 aa3.32□□□□□ -1.88
SH3D19-213ENST00000604922 YWHABP31946 246 aaKnown RBP3.32□□□□□ -1.88
SH3D19-213ENST00000604922 ACADSBP45954 432 aa3.32□□□□□ -1.88
SH3D19-213ENST00000604922 ZNF131P52739 623 aa3.32□□□□□ -1.88
SH3D19-213ENST00000604922 RPS4XP62701 263 aaKnown RBP3.32□□□□□ -1.88
SH3D19-213ENST00000604922 KRT31Q15323 416 aa3.32□□□□□ -1.88
SH3D19-213ENST00000604922 IMMTQ16891 758 aaKnown RBP3.32□□□□□ -1.88
SH3D19-213ENST00000604922 TYSND1Q2T9J0 566 aa3.32□□□□□ -1.88
SH3D19-213ENST00000604922 PAGE2BQ5JRK9 111 aa3.32□□□□□ -1.88
SH3D19-213ENST00000604922 TCHHL1Q5QJ38 904 aaPredicted RBP3.32□□□□□ -1.88
SH3D19-213ENST00000604922 SEL1L2Q5TEA6 688 aa3.32□□□□□ -1.88
SH3D19-213ENST00000604922 SDHAF4Q5VUM1 108 aa3.32□□□□□ -1.88
SH3D19-213ENST00000604922 DMKNQ6E0U4 476 aaPredicted RBP3.32□□□□□ -1.88
SH3D19-213ENST00000604922 TMEM25Q86YD3 366 aa3.32□□□□□ -1.88
SH3D19-213ENST00000604922 FAM9BQ8IZU0 186 aa3.32□□□□□ -1.88
SH3D19-213ENST00000604922 SYCP3Q8IZU3 236 aa3.32□□□□□ -1.88
SH3D19-213ENST00000604922 OR2T3Q8NH03 318 aa3.32□□□□□ -1.88
SH3D19-213ENST00000604922 EXOC6Q8TAG9 804 aa3.32□□□□□ -1.88
SH3D19-213ENST00000604922 FAM46BQ96A09 425 aa3.32□□□□□ -1.88
SH3D19-213ENST00000604922 EPSTI1Q96J88 318 aa3.32□□□□□ -1.88
SH3D19-213ENST00000604922 TNMDQ9H2S6 317 aa3.32□□□□□ -1.88
SH3D19-213ENST00000604922 ESM1Q9NQ30 184 aa3.32□□□□□ -1.88
SH3D19-213ENST00000604922 APOBEC3BQ9UH17 382 aaKnown RBP3.32□□□□□ -1.88
SH3D19-213ENST00000604922 NTNG1Q9Y2I2 539 aa3.32□□□□□ -1.88
SH3D19-213ENST00000604922 RNF115Q9Y4L5 304 aa3.32□□□□□ -1.88
SH3D19-213ENST00000604922 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.31□□□□□ -1.88
SH3D19-213ENST00000604922 A4D1N5 150 aa3.31□□□□□ -1.88
SH3D19-213ENST00000604922 CACNB4O00305 520 aaPredicted RBP3.31□□□□□ -1.88
SH3D19-213ENST00000604922 EI24O14681 340 aa3.31□□□□□ -1.88
SH3D19-213ENST00000604922 SH2D1BO14796 132 aa3.31□□□□□ -1.88
SH3D19-213ENST00000604922 CASC3O15234 703 aaKnown RBP3.31□□□□□ -1.88
SH3D19-213ENST00000604922 LCMT2O60294 686 aaKnown RBP3.31□□□□□ -1.88
SH3D19-213ENST00000604922 PDE5AO76074 875 aa3.31□□□□□ -1.88
SH3D19-213ENST00000604922 OAS1P00973 400 aaKnown RBP3.31□□□□□ -1.88
SH3D19-213ENST00000604922 ALPPL2P10696 532 aa3.31□□□□□ -1.88
SH3D19-213ENST00000604922 VCLP18206 1134 aa3.31□□□□□ -1.88
SH3D19-213ENST00000604922 RPA1P27694 616 aa3.31□□□□□ -1.88
SH3D19-213ENST00000604922 PTPN4P29074 926 aa3.31□□□□□ -1.88
SH3D19-213ENST00000604922 SAA4P35542 130 aa3.31□□□□□ -1.88
SH3D19-213ENST00000604922 SERPINH1P50454 418 aaKnown RBP3.31□□□□□ -1.88
SH3D19-213ENST00000604922 STX1BP61266 288 aa3.31□□□□□ -1.88
SH3D19-213ENST00000604922 CDC20Q12834 499 aa3.31□□□□□ -1.88
SH3D19-213ENST00000604922 SCARB2Q14108 478 aa3.31□□□□□ -1.88
SH3D19-213ENST00000604922 CD226Q15762 336 aa3.31□□□□□ -1.88
SH3D19-213ENST00000604922 GUSBP11Q6P575 273 aa3.31□□□□□ -1.88
SH3D19-213ENST00000604922 OTUD6AQ7L8S5 288 aa3.31□□□□□ -1.88
SH3D19-213ENST00000604922 TGIF2LYQ8IUE0 185 aa3.31□□□□□ -1.88
SH3D19-213ENST00000604922 ZBTB8OSQ8IWT0 167 aa3.31□□□□□ -1.88
SH3D19-213ENST00000604922 BBS7Q8IWZ6 715 aa3.31□□□□□ -1.88
SH3D19-213ENST00000604922 CADM2Q8N3J6 435 aa3.31□□□□□ -1.88
SH3D19-213ENST00000604922 C14orf178Q8N769 122 aaPredicted RBP3.31□□□□□ -1.88
SH3D19-213ENST00000604922 ZNF713Q8N859 430 aaPredicted RBP3.31□□□□□ -1.88
SH3D19-213ENST00000604922 ZNF285Q96NJ3 590 aa3.31□□□□□ -1.88
SH3D19-213ENST00000604922 XPO6Q96QU8 1125 aaKnown RBP3.31□□□□□ -1.88
SH3D19-213ENST00000604922 CCDC94Q9BW85 323 aaPredicted RBP3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms