RNA–Protein interactions for RNA: ENST00000603885.5

CCDC12-208, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-208ENST00000603885 ZNF836Q6ZNA1 936 aa16.04■□□□□ 0.16
CCDC12-208ENST00000603885 ZC3HAV1Q7Z2W4 902 aaKnown RBP16.04■□□□□ 0.16
CCDC12-208ENST00000603885 KRTAP1-3Q8IUG1 177 aa16.04■□□□□ 0.16
CCDC12-208ENST00000603885 TMEM19Q96HH6 336 aa16.04■□□□□ 0.16
CCDC12-208ENST00000603885 EBF4Q9BQW3 602 aa16.04■□□□□ 0.16
CCDC12-208ENST00000603885 TMEM204Q9BSN7 226 aa16.04■□□□□ 0.16
CCDC12-208ENST00000603885 CCDC28BQ9BUN5 200 aa16.04■□□□□ 0.16
CCDC12-208ENST00000603885 PAIP1Q9H074 479 aaKnown RBP16.04■□□□□ 0.16
CCDC12-208ENST00000603885 ZNF232Q9UNY5 417 aa16.04■□□□□ 0.16
CCDC12-208ENST00000603885 ZNF443Q9Y2A4 671 aaPredicted RBP16.04■□□□□ 0.16
CCDC12-208ENST00000603885 NOSIPQ9Y314 301 aaKnown RBP16.04■□□□□ 0.16
CCDC12-208ENST00000603885 PCDHB14Q9Y5E9 798 aa16.04■□□□□ 0.16
CCDC12-208ENST00000603885 A0A0G2JPF8 293 aa16.03■□□□□ 0.16
CCDC12-208ENST00000603885 HNRNPCL2B2RXH8 293 aa16.03■□□□□ 0.16
CCDC12-208ENST00000603885 HNRNPCL3B7ZW38 293 aa16.03■□□□□ 0.16
CCDC12-208ENST00000603885 CLIC1O00299 241 aa16.03■□□□□ 0.16
CCDC12-208ENST00000603885 EIF1BO60739 113 aaKnown RBP16.03■□□□□ 0.16
CCDC12-208ENST00000603885 HNRNPCL1O60812 293 aaKnown RBP16.03■□□□□ 0.16
CCDC12-208ENST00000603885 LYZL6O75951 148 aa16.03■□□□□ 0.16
CCDC12-208ENST00000603885 PLAUP00749 431 aa16.03■□□□□ 0.16
CCDC12-208ENST00000603885 THBS1P07996 1170 aa16.03■□□□□ 0.16
CCDC12-208ENST00000603885 HNRNPCL4P0DMR1 293 aa16.03■□□□□ 0.16
CCDC12-208ENST00000603885 EDNRAP25101 427 aa16.03■□□□□ 0.16
CCDC12-208ENST00000603885 SLC16A1P53985 500 aa16.03■□□□□ 0.16
CCDC12-208ENST00000603885 COPZ1P61923 177 aa16.03■□□□□ 0.16
CCDC12-208ENST00000603885 SLC35A1P78382 337 aa16.03■□□□□ 0.16
CCDC12-208ENST00000603885 FADDQ13158 208 aa16.03■□□□□ 0.16
CCDC12-208ENST00000603885 CAPRIN1Q14444 709 aaKnown RBP16.03■□□□□ 0.16
CCDC12-208ENST00000603885 RGNQ15493 299 aa16.03■□□□□ 0.16
CCDC12-208ENST00000603885 RPS26P11Q5JNZ5 115 aaPredicted RBP16.03■□□□□ 0.16
CCDC12-208ENST00000603885 Q5PR19 223 aa16.03■□□□□ 0.16
CCDC12-208ENST00000603885 RNF220Q5VTB9 566 aa16.03■□□□□ 0.16
CCDC12-208ENST00000603885 HDXQ7Z353 690 aa16.03■□□□□ 0.16
CCDC12-208ENST00000603885 APH1AQ96BI3 265 aa16.03■□□□□ 0.16
CCDC12-208ENST00000603885 ARMC7Q9H6L4 198 aa16.03■□□□□ 0.16
CCDC12-208ENST00000603885 ESRP2Q9H6T0 727 aaKnown RBP16.03■□□□□ 0.16
CCDC12-208ENST00000603885 A0A096LPI6 279 aa16.02■□□□□ 0.16
CCDC12-208ENST00000603885 HMGB1P1B2RPK0 211 aaPredicted RBP16.02■□□□□ 0.16
CCDC12-208ENST00000603885 HS3ST1O14792 307 aa16.02■□□□□ 0.16
CCDC12-208ENST00000603885 GKN3PP0CG01 181 aa16.02■□□□□ 0.16
CCDC12-208ENST00000603885 COX5AP20674 150 aa16.02■□□□□ 0.16
CCDC12-208ENST00000603885 CXCR1P25024 350 aa16.02■□□□□ 0.16
CCDC12-208ENST00000603885 AQP5P55064 265 aa16.02■□□□□ 0.16
CCDC12-208ENST00000603885 H3F3AP84243 136 aa16.02■□□□□ 0.16
CCDC12-208ENST00000603885 STK11Q15831 433 aa16.02■□□□□ 0.16
CCDC12-208ENST00000603885 BLOC1S3Q6QNY0 202 aa16.02■□□□□ 0.16
CCDC12-208ENST00000603885 CCDC103Q8IW40 242 aa16.02■□□□□ 0.16
CCDC12-208ENST00000603885 UBE2J2Q8N2K1 259 aa16.02■□□□□ 0.16
CCDC12-208ENST00000603885 CADM2Q8N3J6 435 aa16.02■□□□□ 0.16
CCDC12-208ENST00000603885 SPDL1Q96EA4 605 aa16.02■□□□□ 0.16
CCDC12-208ENST00000603885 NAA11Q9BSU3 229 aaPredicted RBP16.02■□□□□ 0.16
CCDC12-208ENST00000603885 ADAM19Q9H013 955 aa16.02■□□□□ 0.16
CCDC12-208ENST00000603885 A4GALTQ9NPC4 353 aa16.02■□□□□ 0.16
CCDC12-208ENST00000603885 INTS9Q9NV88 658 aaKnown RBP16.02■□□□□ 0.16
CCDC12-208ENST00000603885 ARGLU1Q9NWB6 273 aaPredicted RBP16.02■□□□□ 0.16
CCDC12-208ENST00000603885 CCDC167Q9P0B6 97 aa16.02■□□□□ 0.16
CCDC12-208ENST00000603885 IFT52Q9Y366 437 aa16.02■□□□□ 0.16
CCDC12-208ENST00000603885 RNF115Q9Y4L5 304 aa16.02■□□□□ 0.16
CCDC12-208ENST00000603885 ZC3H12DA2A288 527 aaKnown RBP16.01■□□□□ 0.15
CCDC12-208ENST00000603885 NR5A2O00482 541 aa16.01■□□□□ 0.15
CCDC12-208ENST00000603885 CD3EP07766 207 aa16.01■□□□□ 0.15
CCDC12-208ENST00000603885 NUDT7P0C024 238 aa16.01■□□□□ 0.15
CCDC12-208ENST00000603885 IMPDH2P12268 514 aa16.01■□□□□ 0.15
CCDC12-208ENST00000603885 BMP2P12643 396 aa16.01■□□□□ 0.15
CCDC12-208ENST00000603885 HOXB9P17482 250 aaPredicted RBP16.01■□□□□ 0.15
CCDC12-208ENST00000603885 GGT1P19440 569 aa16.01■□□□□ 0.15
CCDC12-208ENST00000603885 IGHV1-2P23083 117 aa16.01■□□□□ 0.15
CCDC12-208ENST00000603885 ACAA2P42765 397 aaKnown RBP16.01■□□□□ 0.15
CCDC12-208ENST00000603885 IRX1P78414 480 aaPredicted RBP16.01■□□□□ 0.15
CCDC12-208ENST00000603885 NCMAPQ5T1S8 102 aa16.01■□□□□ 0.15
CCDC12-208ENST00000603885 PRAMEF8Q5VWM4 474 aa16.01■□□□□ 0.15
CCDC12-208ENST00000603885 PRAMEF7Q5VXH5 474 aa16.01■□□□□ 0.15
CCDC12-208ENST00000603885 FBXW9Q5XUX1 488 aa16.01■□□□□ 0.15
CCDC12-208ENST00000603885 WBP2NLQ6ICG8 309 aa16.01■□□□□ 0.15
CCDC12-208ENST00000603885 SSX8Q7RTT4 187 aa16.01■□□□□ 0.15
CCDC12-208ENST00000603885 FUNDC1Q8IVP5 155 aa16.01■□□□□ 0.15
CCDC12-208ENST00000603885 ZNF611Q8N823 705 aa16.01■□□□□ 0.15
CCDC12-208ENST00000603885 TMEM171Q8WVE6 324 aa16.01■□□□□ 0.15
CCDC12-208ENST00000603885 MUCL1Q96DR8 90 aa16.01■□□□□ 0.15
CCDC12-208ENST00000603885 PERPQ96FX8 193 aa16.01■□□□□ 0.15
CCDC12-208ENST00000603885 SPATA9Q9BWV2 254 aa16.01■□□□□ 0.15
CCDC12-208ENST00000603885 BCL2L10Q9HD36 194 aa16.01■□□□□ 0.15
CCDC12-208ENST00000603885 NIPBLQ6KC79 2804 aaeCLIP16■□□□□ 0.15
CCDC12-208ENST00000603885 C5orf58C9J3I9 102 aa16■□□□□ 0.15
CCDC12-208ENST00000603885 CLOCKO15516 846 aa16■□□□□ 0.15
CCDC12-208ENST00000603885 RAMP1O60894 148 aa16■□□□□ 0.15
CCDC12-208ENST00000603885 MRPL33O75394 65 aaKnown RBP16■□□□□ 0.15
CCDC12-208ENST00000603885 IGHV3-9P01782 118 aa16■□□□□ 0.15
CCDC12-208ENST00000603885 NCF2P19878 526 aaPredicted RBP16■□□□□ 0.15
CCDC12-208ENST00000603885 IDUAP35475 653 aa16■□□□□ 0.15
CCDC12-208ENST00000603885 PPA1Q15181 289 aa16■□□□□ 0.15
CCDC12-208ENST00000603885 ZNF311Q5JNZ3 666 aa16■□□□□ 0.15
CCDC12-208ENST00000603885 TIMM23BQ5SRD1 257 aa16■□□□□ 0.15
CCDC12-208ENST00000603885 LRIF1Q5T3J3 769 aa16■□□□□ 0.15
CCDC12-208ENST00000603885 PAQR6Q6TCH4 344 aa16■□□□□ 0.15
CCDC12-208ENST00000603885 PRSS57Q6UWY2 283 aa16■□□□□ 0.15
CCDC12-208ENST00000603885 P2RY8Q86VZ1 359 aa16■□□□□ 0.15
CCDC12-208ENST00000603885 CLIP4Q8N3C7 705 aa16■□□□□ 0.15
CCDC12-208ENST00000603885 BBS10Q8TAM1 723 aa16■□□□□ 0.15
CCDC12-208ENST00000603885 AKAP1Q92667 903 aaKnown RBP eCLIP16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms