RNA–Protein interactions for RNA: ENST00000603038.1

CHCHD2P3-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 2 pseudogene 3, humanhuman

BASIC

Gene CHCHD2P3, Length 451 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD2P3-201ENST00000603038 NF1P21359 2839 aa13.87□□□□□ -0.19
CHCHD2P3-201ENST00000603038 IGKV3D-15A0A087WSY6 115 aa13.87□□□□□ -0.19
CHCHD2P3-201ENST00000603038 A0A096LPI6 279 aa13.87□□□□□ -0.19
CHCHD2P3-201ENST00000603038 NR5A2O00482 541 aa13.87□□□□□ -0.19
CHCHD2P3-201ENST00000603038 FAAHO00519 579 aa13.87□□□□□ -0.19
CHCHD2P3-201ENST00000603038 H2AFXP16104 143 aaPredicted RBP13.87□□□□□ -0.19
CHCHD2P3-201ENST00000603038 FPR1P21462 350 aa13.87□□□□□ -0.19
CHCHD2P3-201ENST00000603038 MAGEA8P43361 318 aa13.87□□□□□ -0.19
CHCHD2P3-201ENST00000603038 CLK1P49759 484 aaKnown RBP13.87□□□□□ -0.19
CHCHD2P3-201ENST00000603038 CRISP3P54108 245 aa13.87□□□□□ -0.19
CHCHD2P3-201ENST00000603038 P2RY6Q15077 328 aa13.87□□□□□ -0.19
CHCHD2P3-201ENST00000603038 PDK3Q15120 406 aa13.87□□□□□ -0.19
CHCHD2P3-201ENST00000603038 Q6ZT83 130 aa13.87□□□□□ -0.19
CHCHD2P3-201ENST00000603038 BHLHA15Q7RTS1 189 aaPredicted RBP13.87□□□□□ -0.19
CHCHD2P3-201ENST00000603038 HDXQ7Z353 690 aa13.87□□□□□ -0.19
CHCHD2P3-201ENST00000603038 ZNF100Q8IYN0 542 aa13.87□□□□□ -0.19
CHCHD2P3-201ENST00000603038 CADM2Q8N3J6 435 aa13.87□□□□□ -0.19
CHCHD2P3-201ENST00000603038 CKAP2Q8WWK9 683 aa13.87□□□□□ -0.19
CHCHD2P3-201ENST00000603038 KISS1RQ969F8 398 aaPredicted RBP13.87□□□□□ -0.19
CHCHD2P3-201ENST00000603038 TACO1Q9BSH4 297 aaKnown RBP13.87□□□□□ -0.19
CHCHD2P3-201ENST00000603038 IKZF5Q9H5V7 419 aa13.87□□□□□ -0.19
CHCHD2P3-201ENST00000603038 TRAPPC4Q9Y296 219 aa13.87□□□□□ -0.19
CHCHD2P3-201ENST00000603038 SPIN1Q9Y657 262 aaPredicted RBP13.87□□□□□ -0.19
CHCHD2P3-201ENST00000603038 NIPBLQ6KC79 2804 aaeCLIP13.86□□□□□ -0.19
CHCHD2P3-201ENST00000603038 A0A0G2JPF8 293 aa13.86□□□□□ -0.19
CHCHD2P3-201ENST00000603038 DPRXA6NFQ7 191 aa13.86□□□□□ -0.19
CHCHD2P3-201ENST00000603038 HNRNPCL2B2RXH8 293 aa13.86□□□□□ -0.19
CHCHD2P3-201ENST00000603038 HNRNPCL3B7ZW38 293 aa13.86□□□□□ -0.19
CHCHD2P3-201ENST00000603038 ZNF208O43345 1280 aa13.86□□□□□ -0.19
CHCHD2P3-201ENST00000603038 FRS3O43559 492 aa13.86□□□□□ -0.19
CHCHD2P3-201ENST00000603038 HNRNPCL1O60812 293 aaKnown RBP13.86□□□□□ -0.19
CHCHD2P3-201ENST00000603038 SMPD2O60906 423 aa13.86□□□□□ -0.19
CHCHD2P3-201ENST00000603038 SASH3O75995 380 aa13.86□□□□□ -0.19
CHCHD2P3-201ENST00000603038 HNRNPCL4P0DMR1 293 aa13.86□□□□□ -0.19
CHCHD2P3-201ENST00000603038 BMP2P12643 396 aa13.86□□□□□ -0.19
CHCHD2P3-201ENST00000603038 ADSLP30566 484 aaPredicted RBP13.86□□□□□ -0.19
CHCHD2P3-201ENST00000603038 HTR3AP46098 478 aa13.86□□□□□ -0.19
CHCHD2P3-201ENST00000603038 STX1BP61266 288 aa13.86□□□□□ -0.19
CHCHD2P3-201ENST00000603038 GNA13Q14344 377 aa13.86□□□□□ -0.19
CHCHD2P3-201ENST00000603038 LIN52Q52LA3 116 aa13.86□□□□□ -0.19
CHCHD2P3-201ENST00000603038 AGKQ53H12 422 aa13.86□□□□□ -0.19
CHCHD2P3-201ENST00000603038 NCMAPQ5T1S8 102 aa13.86□□□□□ -0.19
CHCHD2P3-201ENST00000603038 LRIF1Q5T3J3 769 aa13.86□□□□□ -0.19
CHCHD2P3-201ENST00000603038 SERPINA11Q86U17 422 aa13.86□□□□□ -0.19
CHCHD2P3-201ENST00000603038 COMTD1Q86VU5 262 aa13.86□□□□□ -0.19
CHCHD2P3-201ENST00000603038 ZNF433Q8N7K0 673 aaPredicted RBP13.86□□□□□ -0.19
CHCHD2P3-201ENST00000603038 DYDC1Q8WWB3 177 aa13.86□□□□□ -0.19
CHCHD2P3-201ENST00000603038 HSD17B8Q92506 261 aa13.86□□□□□ -0.19
CHCHD2P3-201ENST00000603038 AKAP1Q92667 903 aaKnown RBP eCLIP13.86□□□□□ -0.19
CHCHD2P3-201ENST00000603038 SPDL1Q96EA4 605 aa13.86□□□□□ -0.19
CHCHD2P3-201ENST00000603038 CCL19Q99731 98 aa13.86□□□□□ -0.19
CHCHD2P3-201ENST00000603038 PIP5K1AQ99755 562 aa13.86□□□□□ -0.19
CHCHD2P3-201ENST00000603038 INTS9Q9NV88 658 aaKnown RBP13.86□□□□□ -0.19
CHCHD2P3-201ENST00000603038 CALML5Q9NZT1 146 aa13.86□□□□□ -0.19
CHCHD2P3-201ENST00000603038 VAPAQ9P0L0 249 aa13.86□□□□□ -0.19
CHCHD2P3-201ENST00000603038 NOSIPQ9Y314 301 aaKnown RBP13.86□□□□□ -0.19
CHCHD2P3-201ENST00000603038 NAV3Q8IVL0 2385 aa13.86□□□□□ -0.19
CHCHD2P3-201ENST00000603038 HEATR1Q9H583 2144 aaKnown RBP13.85□□□□□ -0.19
CHCHD2P3-201ENST00000603038 TRBV5-3A0A0A0MS03 114 aa13.85□□□□□ -0.19
CHCHD2P3-201ENST00000603038 PGM3O95394 542 aa13.85□□□□□ -0.19
CHCHD2P3-201ENST00000603038 FKBP2P26885 142 aaKnown RBP13.85□□□□□ -0.19
CHCHD2P3-201ENST00000603038 SLC16A1P53985 500 aa13.85□□□□□ -0.19
CHCHD2P3-201ENST00000603038 RIPPLY3P57055 190 aa13.85□□□□□ -0.19
CHCHD2P3-201ENST00000603038 CEACAM7Q14002 265 aa13.85□□□□□ -0.19
CHCHD2P3-201ENST00000603038 CAPRIN1Q14444 709 aaKnown RBP13.85□□□□□ -0.19
CHCHD2P3-201ENST00000603038 ZNF440Q8IYI8 595 aa13.85□□□□□ -0.19
CHCHD2P3-201ENST00000603038 CIARTQ8N365 385 aaPredicted RBP13.85□□□□□ -0.19
CHCHD2P3-201ENST00000603038 TMEM99Q8N816 258 aa13.85□□□□□ -0.19
CHCHD2P3-201ENST00000603038 OR52E4Q8NGH9 312 aa13.85□□□□□ -0.19
CHCHD2P3-201ENST00000603038 PIGTQ969N2 578 aa13.85□□□□□ -0.19
CHCHD2P3-201ENST00000603038 DDIT4LQ96D03 193 aa13.85□□□□□ -0.19
CHCHD2P3-201ENST00000603038 ZHX1-C8orf76Q96EF9 292 aa13.85□□□□□ -0.19
CHCHD2P3-201ENST00000603038 PERPQ96FX8 193 aa13.85□□□□□ -0.19
CHCHD2P3-201ENST00000603038 PRR14Q9BWN1 585 aa13.85□□□□□ -0.19
CHCHD2P3-201ENST00000603038 SPATA9Q9BWV2 254 aa13.85□□□□□ -0.19
CHCHD2P3-201ENST00000603038 BCL2L10Q9HD36 194 aa13.85□□□□□ -0.19
CHCHD2P3-201ENST00000603038 A4GALTQ9NPC4 353 aa13.85□□□□□ -0.19
CHCHD2P3-201ENST00000603038 ZNF232Q9UNY5 417 aa13.85□□□□□ -0.19
CHCHD2P3-201ENST00000603038 LIPT2A6NK58 231 aa13.84□□□□□ -0.19
CHCHD2P3-201ENST00000603038 HMGB1P1B2RPK0 211 aaPredicted RBP13.84□□□□□ -0.19
CHCHD2P3-201ENST00000603038 HS3ST1O14792 307 aa13.84□□□□□ -0.19
CHCHD2P3-201ENST00000603038 TPST1O60507 370 aa13.84□□□□□ -0.19
CHCHD2P3-201ENST00000603038 AKR7A3O95154 331 aa13.84□□□□□ -0.19
CHCHD2P3-201ENST00000603038 THBS1P07996 1170 aa13.84□□□□□ -0.19
CHCHD2P3-201ENST00000603038 CXCR1P25024 350 aa13.84□□□□□ -0.19
CHCHD2P3-201ENST00000603038 NR1H2P55055 460 aa13.84□□□□□ -0.19
CHCHD2P3-201ENST00000603038 SLC35A1P78382 337 aa13.84□□□□□ -0.19
CHCHD2P3-201ENST00000603038 SLC17A1Q14916 467 aa13.84□□□□□ -0.19
CHCHD2P3-201ENST00000603038 LARS2Q15031 903 aaKnown RBP13.84□□□□□ -0.19
CHCHD2P3-201ENST00000603038 STK11Q15831 433 aa13.84□□□□□ -0.19
CHCHD2P3-201ENST00000603038 ZNF311Q5JNZ3 666 aa13.84□□□□□ -0.19
CHCHD2P3-201ENST00000603038 Q5PR19 223 aa13.84□□□□□ -0.19
CHCHD2P3-201ENST00000603038 RNF220Q5VTB9 566 aa13.84□□□□□ -0.19
CHCHD2P3-201ENST00000603038 FBXW9Q5XUX1 488 aa13.84□□□□□ -0.19
CHCHD2P3-201ENST00000603038 WBP2NLQ6ICG8 309 aa13.84□□□□□ -0.19
CHCHD2P3-201ENST00000603038 C20orf204Q6ZNR8 217 aa13.84□□□□□ -0.19
CHCHD2P3-201ENST00000603038 P3H2Q8IVL5 708 aa13.84□□□□□ -0.19
CHCHD2P3-201ENST00000603038 UBE2J2Q8N2K1 259 aa13.84□□□□□ -0.19
CHCHD2P3-201ENST00000603038 GOLGA6L1Q8N7Z2 621 aa13.84□□□□□ -0.19
CHCHD2P3-201ENST00000603038 ZIC4Q8N9L1 334 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms