RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 STHQ8IWL8 128 aa4.62□□□□□ -1.67
SPTBN1-206ENST00000602898 SLC22A15Q8IZD6 547 aa4.62□□□□□ -1.67
SPTBN1-206ENST00000602898 PRSS35Q8N3Z0 413 aa4.62□□□□□ -1.67
SPTBN1-206ENST00000602898 LRRC75AQ8NAA5 344 aa4.62□□□□□ -1.67
SPTBN1-206ENST00000602898 OLIG1Q8TAK6 271 aa4.62□□□□□ -1.67
SPTBN1-206ENST00000602898 STOML3Q8TAV4 291 aa4.62□□□□□ -1.67
SPTBN1-206ENST00000602898 LNX1Q8TBB1 728 aaPredicted RBP4.62□□□□□ -1.67
SPTBN1-206ENST00000602898 L3HYPDHQ96EM0 354 aa4.62□□□□□ -1.67
SPTBN1-206ENST00000602898 AKR1E2Q96JD6 320 aa4.62□□□□□ -1.67
SPTBN1-206ENST00000602898 ZNF300Q96RE9 604 aaPredicted RBP4.62□□□□□ -1.67
SPTBN1-206ENST00000602898 CMSS1Q9BQ75 279 aaKnown RBP4.62□□□□□ -1.67
SPTBN1-206ENST00000602898 C1QTNF5Q9BXJ0 243 aa4.62□□□□□ -1.67
SPTBN1-206ENST00000602898 ZNF436Q9C0F3 470 aaPredicted RBP4.62□□□□□ -1.67
SPTBN1-206ENST00000602898 SRRQ9GZT4 340 aa4.62□□□□□ -1.67
SPTBN1-206ENST00000602898 PRO3102Q9H379 93 aa4.62□□□□□ -1.67
SPTBN1-206ENST00000602898 TMPRSS5Q9H3S3 457 aa4.62□□□□□ -1.67
SPTBN1-206ENST00000602898 SPAG4Q9NPE6 437 aa4.62□□□□□ -1.67
SPTBN1-206ENST00000602898 OSER1Q9NX31 292 aa4.62□□□□□ -1.67
SPTBN1-206ENST00000602898 TFCP2L1Q9NZI6 479 aa4.62□□□□□ -1.67
SPTBN1-206ENST00000602898 TMEM181Q9P2C4 612 aa4.62□□□□□ -1.67
SPTBN1-206ENST00000602898 CD207Q9UJ71 328 aa4.62□□□□□ -1.67
SPTBN1-206ENST00000602898 STUB1Q9UNE7 303 aa4.62□□□□□ -1.67
SPTBN1-206ENST00000602898 FLVCR2Q9UPI3 526 aa4.62□□□□□ -1.67
SPTBN1-206ENST00000602898 ATRNL1Q5VV63 1379 aa4.62□□□□□ -1.67
SPTBN1-206ENST00000602898 OTOFQ9HC10 1997 aa4.62□□□□□ -1.67
SPTBN1-206ENST00000602898 NPIPA5A0A0B4J1W7 369 aa4.62□□□□□ -1.67
SPTBN1-206ENST00000602898 ATP6AP2A0A1C7CYW4 349 aa4.62□□□□□ -1.67
SPTBN1-206ENST00000602898 ZNF99A8MXY4 864 aaPredicted RBP4.62□□□□□ -1.67
SPTBN1-206ENST00000602898 C9JVG2 144 aa4.62□□□□□ -1.67
SPTBN1-206ENST00000602898 NPIPA5E9PKD4 350 aa4.62□□□□□ -1.67
SPTBN1-206ENST00000602898 E9PQ18 207 aa4.62□□□□□ -1.67
SPTBN1-206ENST00000602898 NPIPA3F8WFD2 350 aa4.62□□□□□ -1.67
SPTBN1-206ENST00000602898 RGS10O43665 173 aa4.62□□□□□ -1.67
SPTBN1-206ENST00000602898 PLIN3O60664 434 aa4.62□□□□□ -1.67
SPTBN1-206ENST00000602898 BANF1O75531 89 aa4.62□□□□□ -1.67
SPTBN1-206ENST00000602898 OR2J3O76001 311 aa4.62□□□□□ -1.67
SPTBN1-206ENST00000602898 SNAI1O95863 264 aaPredicted RBP4.62□□□□□ -1.67
SPTBN1-206ENST00000602898 ATXN1LP0C7T5 689 aaKnown RBP4.62□□□□□ -1.67
SPTBN1-206ENST00000602898 CPN1P15169 458 aa4.62□□□□□ -1.67
SPTBN1-206ENST00000602898 PAX1P15863 534 aa4.62□□□□□ -1.67
SPTBN1-206ENST00000602898 ME2P23368 584 aa4.62□□□□□ -1.67
SPTBN1-206ENST00000602898 GLRA1P23415 457 aa4.62□□□□□ -1.67
SPTBN1-206ENST00000602898 DDTP30046 118 aa4.62□□□□□ -1.67
SPTBN1-206ENST00000602898 ADORA1P30542 326 aa4.62□□□□□ -1.67
SPTBN1-206ENST00000602898 CD96P40200 585 aa4.62□□□□□ -1.67
SPTBN1-206ENST00000602898 AQP5P55064 265 aa4.62□□□□□ -1.67
SPTBN1-206ENST00000602898 CD81P60033 236 aa4.62□□□□□ -1.67
SPTBN1-206ENST00000602898 RPL23AP62750 156 aaKnown RBP4.62□□□□□ -1.67
SPTBN1-206ENST00000602898 SLC7A9P82251 487 aa4.62□□□□□ -1.67
SPTBN1-206ENST00000602898 TFAMQ00059 246 aaKnown RBP4.62□□□□□ -1.67
SPTBN1-206ENST00000602898 ZNF155Q12901 538 aaPredicted RBP4.62□□□□□ -1.67
SPTBN1-206ENST00000602898 RNASE10Q5GAN6 216 aaKnown RBP4.62□□□□□ -1.67
SPTBN1-206ENST00000602898 PRAMEF17Q5VTA0 474 aa4.62□□□□□ -1.67
SPTBN1-206ENST00000602898 LRRC8EQ6NSJ5 796 aa4.62□□□□□ -1.67
SPTBN1-206ENST00000602898 ANKRD54Q6NXT1 300 aa4.62□□□□□ -1.67
SPTBN1-206ENST00000602898 ATRAIDQ6UW56 229 aa4.62□□□□□ -1.67
SPTBN1-206ENST00000602898 GLB1LQ6UWU2 654 aa4.62□□□□□ -1.67
SPTBN1-206ENST00000602898 CERS6Q6ZMG9 384 aa4.62□□□□□ -1.67
SPTBN1-206ENST00000602898 SH2D5Q6ZV89 423 aa4.62□□□□□ -1.67
SPTBN1-206ENST00000602898 FAM214BQ7L5A3 538 aa4.62□□□□□ -1.67
SPTBN1-206ENST00000602898 PRRT2Q7Z6L0 340 aaPredicted RBP4.62□□□□□ -1.67
SPTBN1-206ENST00000602898 PHF13Q86YI8 300 aaPredicted RBP4.62□□□□□ -1.67
SPTBN1-206ENST00000602898 ZNF808Q8N4W9 903 aaPredicted RBP4.62□□□□□ -1.67
SPTBN1-206ENST00000602898 PQLC3Q8N755 202 aa4.62□□□□□ -1.67
SPTBN1-206ENST00000602898 FAM71CQ8NEG0 241 aa4.62□□□□□ -1.67
SPTBN1-206ENST00000602898 TFB1MQ8WVM0 346 aaKnown RBP4.62□□□□□ -1.67
SPTBN1-206ENST00000602898 TCTEX1D2Q8WW35 142 aa4.62□□□□□ -1.67
SPTBN1-206ENST00000602898 PIH1D2Q8WWB5 315 aa4.62□□□□□ -1.67
SPTBN1-206ENST00000602898 SNRNP40Q96DI7 357 aaKnown RBP4.62□□□□□ -1.67
SPTBN1-206ENST00000602898 CDKN2AIPNLQ96HQ2 116 aa4.62□□□□□ -1.67
SPTBN1-206ENST00000602898 JMJD8Q96S16 334 aa4.62□□□□□ -1.67
SPTBN1-206ENST00000602898 HOPXQ9BPY8 73 aaPredicted RBP4.62□□□□□ -1.67
SPTBN1-206ENST00000602898 TMEM175Q9BSA9 504 aa4.62□□□□□ -1.67
SPTBN1-206ENST00000602898 GGACTQ9BVM4 153 aa4.62□□□□□ -1.67
SPTBN1-206ENST00000602898 FSD1LQ9BXM9 530 aa4.62□□□□□ -1.67
SPTBN1-206ENST00000602898 ZBTB26Q9HCK0 441 aa4.62□□□□□ -1.67
SPTBN1-206ENST00000602898 NLGN3Q9NZ94 848 aa4.62□□□□□ -1.67
SPTBN1-206ENST00000602898 NPIPA1Q9UND3 350 aa4.62□□□□□ -1.67
SPTBN1-206ENST00000602898 MRPS18CQ9Y3D5 142 aaKnown RBP4.62□□□□□ -1.67
SPTBN1-206ENST00000602898 ALG6Q9Y672 507 aa4.62□□□□□ -1.67
SPTBN1-206ENST00000602898 NEMP2A6NFY4 417 aa4.61□□□□□ -1.67
SPTBN1-206ENST00000602898 MGAT4DA6NG13 374 aa4.61□□□□□ -1.67
SPTBN1-206ENST00000602898 ACOT8O14734 319 aa4.61□□□□□ -1.67
SPTBN1-206ENST00000602898 SC5DO75845 299 aa4.61□□□□□ -1.67
SPTBN1-206ENST00000602898 LRIG2O94898 1065 aa4.61□□□□□ -1.67
SPTBN1-206ENST00000602898 STBD1O95210 358 aa4.61□□□□□ -1.67
SPTBN1-206ENST00000602898 VAPBO95292 243 aa4.61□□□□□ -1.67
SPTBN1-206ENST00000602898 LALBAP00709 142 aa4.61□□□□□ -1.67
SPTBN1-206ENST00000602898 MMP10P09238 476 aa4.61□□□□□ -1.67
SPTBN1-206ENST00000602898 UBCP0CG48 685 aaKnown RBP4.61□□□□□ -1.67
SPTBN1-206ENST00000602898 PROZP22891 400 aa4.61□□□□□ -1.67
SPTBN1-206ENST00000602898 ELK4P28324 431 aa4.61□□□□□ -1.67
SPTBN1-206ENST00000602898 FMO3P31513 532 aa4.61□□□□□ -1.67
SPTBN1-206ENST00000602898 FCGR2BP31994 310 aaPredicted RBP4.61□□□□□ -1.67
SPTBN1-206ENST00000602898 MTNR1AP48039 350 aa4.61□□□□□ -1.67
SPTBN1-206ENST00000602898 RGS6P49758 472 aa4.61□□□□□ -1.67
SPTBN1-206ENST00000602898 MVDP53602 400 aa4.61□□□□□ -1.67
SPTBN1-206ENST00000602898 PKIAP61925 76 aa4.61□□□□□ -1.67
SPTBN1-206ENST00000602898 E2F1Q01094 437 aa4.61□□□□□ -1.67
SPTBN1-206ENST00000602898 PAX5Q02548 391 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms