RNA–Protein interactions for RNA: ENST00000602723.5

CSMD1-217, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 10,938 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-217ENST00000602723 XCR1P46094 333 aa9□□□□□ -0.97
CSMD1-217ENST00000602723 PODNL1Q6PEZ8 512 aa9□□□□□ -0.97
CSMD1-217ENST00000602723 FAM160A2Q8N612 972 aaPredicted RBP9□□□□□ -0.97
CSMD1-217ENST00000602723 PITHD1Q9GZP4 211 aaPredicted RBP9□□□□□ -0.97
CSMD1-217ENST00000602723 C1orf123Q9NWV4 160 aa9□□□□□ -0.97
CSMD1-217ENST00000602723 CXXC1Q9P0U4 656 aaPredicted RBP9□□□□□ -0.97
CSMD1-217ENST00000602723 ANKRD36A6QL64 1941 aa9□□□□□ -0.97
CSMD1-217ENST00000602723 FGF4P08620 206 aa9□□□□□ -0.97
CSMD1-217ENST00000602723 HBQ1P09105 142 aa9□□□□□ -0.97
CSMD1-217ENST00000602723 CSNK1A1P48729 337 aa9□□□□□ -0.97
CSMD1-217ENST00000602723 SORDQ00796 357 aa9□□□□□ -0.97
CSMD1-217ENST00000602723 COL9A2Q14055 689 aaPredicted RBP9□□□□□ -0.97
CSMD1-217ENST00000602723 BCL7AQ4VC05 210 aa9□□□□□ -0.97
CSMD1-217ENST00000602723 GAREM2Q75VX8 874 aa9□□□□□ -0.97
CSMD1-217ENST00000602723 ZC3HAV1Q7Z2W4 902 aaKnown RBP9□□□□□ -0.97
CSMD1-217ENST00000602723 PLPP5Q8NEB5 264 aa9□□□□□ -0.97
CSMD1-217ENST00000602723 CHTF18Q8WVB6 975 aa9□□□□□ -0.97
CSMD1-217ENST00000602723 CDS1Q92903 461 aa9□□□□□ -0.97
CSMD1-217ENST00000602723 GATA6Q92908 595 aa9□□□□□ -0.97
CSMD1-217ENST00000602723 PURGQ9UJV8 347 aaKnown RBP9□□□□□ -0.97
CSMD1-217ENST00000602723 TMEM212A6NML5 194 aa9□□□□□ -0.97
CSMD1-217ENST00000602723 GABRPO00591 440 aa9□□□□□ -0.97
CSMD1-217ENST00000602723 IGHG1P01857 330 aa9□□□□□ -0.97
CSMD1-217ENST00000602723 HLA-HP01893 362 aa9□□□□□ -0.97
CSMD1-217ENST00000602723 CCL5P13501 91 aa9□□□□□ -0.97
CSMD1-217ENST00000602723 SYN1P17600 705 aa9□□□□□ -0.97
CSMD1-217ENST00000602723 GCH1P30793 250 aa9□□□□□ -0.97
CSMD1-217ENST00000602723 SIX1Q15475 284 aaPredicted RBP9□□□□□ -0.97
CSMD1-217ENST00000602723 OR7A5Q15622 319 aa9□□□□□ -0.97
CSMD1-217ENST00000602723 CST6Q15828 149 aa9□□□□□ -0.97
CSMD1-217ENST00000602723 ZNF74Q16587 644 aa9□□□□□ -0.97
CSMD1-217ENST00000602723 ZNF542PQ5EBM4 170 aa9□□□□□ -0.97
CSMD1-217ENST00000602723 C6orf132Q5T0Z8 1188 aa9□□□□□ -0.97
CSMD1-217ENST00000602723 ATPAF1Q5TC12 328 aaPredicted RBP9□□□□□ -0.97
CSMD1-217ENST00000602723 CCDC71Q8IV32 467 aaPredicted RBP9□□□□□ -0.97
CSMD1-217ENST00000602723 SAP130Q9H0E3 1048 aa9□□□□□ -0.97
CSMD1-217ENST00000602723 SMCO4Q9NRQ5 59 aa9□□□□□ -0.97
CSMD1-217ENST00000602723 TJP1Q07157 1748 aa9□□□□□ -0.97
CSMD1-217ENST00000602723 HIDE1A8MVS5 230 aa9□□□□□ -0.97
CSMD1-217ENST00000602723 SGK494L7N484 410 aa9□□□□□ -0.97
CSMD1-217ENST00000602723 SDC1P18827 310 aa9□□□□□ -0.97
CSMD1-217ENST00000602723 BPHLQ86WA6 291 aaPredicted RBP9□□□□□ -0.97
CSMD1-217ENST00000602723 GPR150Q8NGU9 434 aa9□□□□□ -0.97
CSMD1-217ENST00000602723 ANKRD9Q96BM1 317 aaPredicted RBP9□□□□□ -0.97
CSMD1-217ENST00000602723 RSPRY1Q96DX4 576 aa9□□□□□ -0.97
CSMD1-217ENST00000602723 ENKD1Q9H0I2 346 aa9□□□□□ -0.97
CSMD1-217ENST00000602723 C5AR1P21730 350 aa8.99□□□□□ -0.97
CSMD1-217ENST00000602723 RAB30Q15771 203 aa8.99□□□□□ -0.97
CSMD1-217ENST00000602723 CCNJQ5T5M9 372 aa8.99□□□□□ -0.97
CSMD1-217ENST00000602723 SLC23A2Q9UGH3 650 aa8.99□□□□□ -0.97
CSMD1-217ENST00000602723 WASH4PA8MWX3 477 aa8.99□□□□□ -0.97
CSMD1-217ENST00000602723 ATP6V1G2-DDX39BF2Z307 99 aa8.99□□□□□ -0.97
CSMD1-217ENST00000602723 CBR1P16152 277 aa8.99□□□□□ -0.97
CSMD1-217ENST00000602723 CASP3P42574 277 aa8.99□□□□□ -0.97
CSMD1-217ENST00000602723 PGGHGQ32M88 737 aa8.99□□□□□ -0.97
CSMD1-217ENST00000602723 HBMQ6B0K9 141 aa8.99□□□□□ -0.97
CSMD1-217ENST00000602723 DUSP19Q8WTR2 217 aa8.99□□□□□ -0.97
CSMD1-217ENST00000602723 EGLN3Q9H6Z9 239 aa8.99□□□□□ -0.97
CSMD1-217ENST00000602723 SLX4Q8IY92 1834 aa8.99□□□□□ -0.97
CSMD1-217ENST00000602723 DEFB110Q30KQ9 67 aa8.99□□□□□ -0.97
CSMD1-217ENST00000602723 S100A7AQ86SG5 101 aa8.99□□□□□ -0.97
CSMD1-217ENST00000602723 WDTC1Q8N5D0 677 aa8.99□□□□□ -0.97
CSMD1-217ENST00000602723 HORMAD2Q8N7B1 307 aa8.99□□□□□ -0.97
CSMD1-217ENST00000602723 FAM213BQ8TBF2 198 aa8.99□□□□□ -0.97
CSMD1-217ENST00000602723 ADAMTS16Q8TE57 1224 aa8.99□□□□□ -0.97
CSMD1-217ENST00000602723 MITD1Q8WV92 249 aa8.99□□□□□ -0.97
CSMD1-217ENST00000602723 KCTD12Q96CX2 325 aaKnown RBP8.99□□□□□ -0.97
CSMD1-217ENST00000602723 RTP3Q9BQQ7 232 aa8.99□□□□□ -0.97
CSMD1-217ENST00000602723 NBASA2RRP1 2371 aa8.99□□□□□ -0.97
CSMD1-217ENST00000602723 PLSCR5A0PG75 271 aa8.99□□□□□ -0.97
CSMD1-217ENST00000602723 RFXAPO00287 272 aa8.99□□□□□ -0.97
CSMD1-217ENST00000602723 FOXA1P55317 472 aa8.99□□□□□ -0.97
CSMD1-217ENST00000602723 PCBD1P61457 104 aa8.99□□□□□ -0.97
CSMD1-217ENST00000602723 GTF3C1Q12789 2109 aa8.99□□□□□ -0.97
CSMD1-217ENST00000602723 SPRED3Q2MJR0 410 aa8.99□□□□□ -0.97
CSMD1-217ENST00000602723 USP53Q70EK8 1073 aa8.99□□□□□ -0.97
CSMD1-217ENST00000602723 APCDD1Q8J025 514 aa8.99□□□□□ -0.97
CSMD1-217ENST00000602723 OR8J2Q8NGG1 315 aa8.99□□□□□ -0.97
CSMD1-217ENST00000602723 SDC3O75056 442 aa8.99□□□□□ -0.97
CSMD1-217ENST00000602723 NSA2O95478 260 aaKnown RBP8.99□□□□□ -0.97
CSMD1-217ENST00000602723 TLE4Q04727 773 aa8.99□□□□□ -0.97
CSMD1-217ENST00000602723 IL26Q9NPH9 171 aa8.99□□□□□ -0.97
CSMD1-217ENST00000602723 ANTXRLA6NF34 631 aa8.99□□□□□ -0.97
CSMD1-217ENST00000602723 CHRM4P08173 479 aa8.99□□□□□ -0.97
CSMD1-217ENST00000602723 MGST1P10620 155 aaKnown RBP8.99□□□□□ -0.97
CSMD1-217ENST00000602723 ETV1P50549 477 aa8.99□□□□□ -0.97
CSMD1-217ENST00000602723 KCNJ8Q15842 424 aa8.99□□□□□ -0.97
CSMD1-217ENST00000602723 NRARPQ7Z6K4 114 aa8.99□□□□□ -0.97
CSMD1-217ENST00000602723 NEIL2Q969S2 332 aa8.99□□□□□ -0.97
CSMD1-217ENST00000602723 LPAR4Q99677 370 aa8.99□□□□□ -0.97
CSMD1-217ENST00000602723 LMF2Q9BU23 707 aaKnown RBP8.99□□□□□ -0.97
CSMD1-217ENST00000602723 ZDHHC7Q9NXF8 308 aa8.99□□□□□ -0.97
CSMD1-217ENST00000602723 DHRS4L1P0CG22 281 aa8.99□□□□□ -0.97
CSMD1-217ENST00000602723 LAX1Q8IWV1 398 aa8.99□□□□□ -0.97
CSMD1-217ENST00000602723 ADAM19Q9H013 955 aa8.99□□□□□ -0.97
CSMD1-217ENST00000602723 EMC7Q9NPA0 242 aa8.99□□□□□ -0.97
CSMD1-217ENST00000602723 SLCO3A1Q9UIG8 710 aa8.99□□□□□ -0.97
CSMD1-217ENST00000602723 ZNF623O75123 536 aa8.99□□□□□ -0.97
CSMD1-217ENST00000602723 T-ENOLP0DO92 83 aa8.99□□□□□ -0.97
CSMD1-217ENST00000602723 CD70P32970 193 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms