RNA–Protein interactions for RNA: ENST00000600733.5

SHKBP1-225, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5 BASIC

Gene SHKBP1, Length 2,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-225ENST00000600733 PBX4Q9BYU1 374 aa18.6■□□□□ 0.57
SHKBP1-225ENST00000600733 SERTAD3Q9UJW9 196 aa18.6■□□□□ 0.57
SHKBP1-225ENST00000600733 VCANP13611 3396 aa18.59■□□□□ 0.57
SHKBP1-225ENST00000600733 S1PR1P21453 382 aa18.59■□□□□ 0.57
SHKBP1-225ENST00000600733 RBM34P42696 430 aaKnown RBP18.59■□□□□ 0.57
SHKBP1-225ENST00000600733 CDK5R1Q15078 307 aa18.59■□□□□ 0.57
SHKBP1-225ENST00000600733 NNATQ16517 81 aa18.59■□□□□ 0.57
SHKBP1-225ENST00000600733 CEP78Q5JTW2 689 aa18.59■□□□□ 0.57
SHKBP1-225ENST00000600733 SIAH3Q8IW03 269 aa18.59■□□□□ 0.57
SHKBP1-225ENST00000600733 TOMM5Q8N4H5 51 aa18.59■□□□□ 0.57
SHKBP1-225ENST00000600733 OR14A2Q96R54 314 aa18.59■□□□□ 0.57
SHKBP1-225ENST00000600733 CNN2Q99439 309 aaKnown RBP18.59■□□□□ 0.57
SHKBP1-225ENST00000600733 PDCD1LG2Q9BQ51 273 aa18.59■□□□□ 0.57
SHKBP1-225ENST00000600733 TRAF4Q9BUZ4 470 aaPredicted RBP18.59■□□□□ 0.57
SHKBP1-225ENST00000600733 TRIM2Q9C040 744 aa18.59■□□□□ 0.57
SHKBP1-225ENST00000600733 FAM60AQ9NP50 221 aa18.59■□□□□ 0.57
SHKBP1-225ENST00000600733 HEATR5AQ86XA9 2040 aa18.59■□□□□ 0.57
SHKBP1-225ENST00000600733 A0A0J9YY10 115 aa18.58■□□□□ 0.57
SHKBP1-225ENST00000600733 NOTOA8MTQ0 251 aa18.58■□□□□ 0.57
SHKBP1-225ENST00000600733 CDC123O75794 336 aaPredicted RBP18.58■□□□□ 0.57
SHKBP1-225ENST00000600733 DHFRP00374 187 aa18.58■□□□□ 0.57
SHKBP1-225ENST00000600733 CELA2BP08218 269 aaPredicted RBP18.58■□□□□ 0.57
SHKBP1-225ENST00000600733 SLC35E2P0CK97 266 aa18.58■□□□□ 0.57
SHKBP1-225ENST00000600733 GIFP27352 417 aa18.58■□□□□ 0.57
SHKBP1-225ENST00000600733 RPS11P62280 158 aaKnown RBP eCLIP18.58■□□□□ 0.57
SHKBP1-225ENST00000600733 ILF3Q12906 894 aaKnown RBP eCLIP18.58■□□□□ 0.57
SHKBP1-225ENST00000600733 ZNF542PQ5EBM4 170 aa18.58■□□□□ 0.57
SHKBP1-225ENST00000600733 GRAMD2AQ8IUY3 354 aa18.58■□□□□ 0.57
SHKBP1-225ENST00000600733 OR11H7Q8NGC8 314 aa18.58■□□□□ 0.57
SHKBP1-225ENST00000600733 SCMH1Q96GD3 660 aa18.58■□□□□ 0.57
SHKBP1-225ENST00000600733 DPAGT1Q9H3H5 408 aa18.58■□□□□ 0.57
SHKBP1-225ENST00000600733 GHITMQ9H3K2 345 aa18.58■□□□□ 0.57
SHKBP1-225ENST00000600733 GNG8Q9UK08 70 aa18.58■□□□□ 0.57
SHKBP1-225ENST00000600733 AK6Q9Y3D8 172 aaKnown RBP18.58■□□□□ 0.57
SHKBP1-225ENST00000600733 TRAV1-2A0A0B4J238 106 aa18.58■□□□□ 0.56
SHKBP1-225ENST00000600733 TNFRSF10CO14798 259 aa18.58■□□□□ 0.56
SHKBP1-225ENST00000600733 OGG1O15527 345 aa18.58■□□□□ 0.56
SHKBP1-225ENST00000600733 TCRBP04435 133 aa18.58■□□□□ 0.56
SHKBP1-225ENST00000600733 LSMEM1Q8N8F7 131 aa18.58■□□□□ 0.56
SHKBP1-225ENST00000600733 SNX33Q8WV41 574 aa18.58■□□□□ 0.56
SHKBP1-225ENST00000600733 HOXB13Q92826 284 aaPredicted RBP18.58■□□□□ 0.56
SHKBP1-225ENST00000600733 ORAI1Q96D31 301 aa18.58■□□□□ 0.56
SHKBP1-225ENST00000600733 HYLS1Q96M11 299 aa18.58■□□□□ 0.56
SHKBP1-225ENST00000600733 GSDMCQ9BYG8 508 aa18.58■□□□□ 0.56
SHKBP1-225ENST00000600733 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP18.58■□□□□ 0.56
SHKBP1-225ENST00000600733 IRF2BPLQ9H1B7 796 aa18.58■□□□□ 0.56
SHKBP1-225ENST00000600733 C7orf66A4D0T2 115 aa18.57■□□□□ 0.56
SHKBP1-225ENST00000600733 EPOPA6NHQ4 379 aa18.57■□□□□ 0.56
SHKBP1-225ENST00000600733 FLRT2O43155 660 aa18.57■□□□□ 0.56
SHKBP1-225ENST00000600733 UBL3O95164 117 aa18.57■□□□□ 0.56
SHKBP1-225ENST00000600733 NDUFB2O95178 105 aa18.57■□□□□ 0.56
SHKBP1-225ENST00000600733 PSMB10P40306 273 aa18.57■□□□□ 0.56
SHKBP1-225ENST00000600733 CCR6P51684 374 aa18.57■□□□□ 0.56
SHKBP1-225ENST00000600733 RAB38P57729 211 aa18.57■□□□□ 0.56
SHKBP1-225ENST00000600733 SIRPAP78324 504 aa18.57■□□□□ 0.56
SHKBP1-225ENST00000600733 LINC00114Q6XXX2 140 aa18.57■□□□□ 0.56
SHKBP1-225ENST00000600733 Q6ZSR6 202 aa18.57■□□□□ 0.56
SHKBP1-225ENST00000600733 PRSS45Q7RTY3 260 aa18.57■□□□□ 0.56
SHKBP1-225ENST00000600733 SLC35F2Q8IXU6 374 aa18.57■□□□□ 0.56
SHKBP1-225ENST00000600733 IZUMO1Q8IYV9 350 aa18.57■□□□□ 0.56
SHKBP1-225ENST00000600733 C9orf62Q8N4C0 152 aa18.57■□□□□ 0.56
SHKBP1-225ENST00000600733 OR7G1Q8NGA0 311 aa18.57■□□□□ 0.56
SHKBP1-225ENST00000600733 ZPLD1Q8TCW7 415 aa18.57■□□□□ 0.56
SHKBP1-225ENST00000600733 FBRSQ9HAH7 460 aa18.57■□□□□ 0.56
SHKBP1-225ENST00000600733 SLC23A1Q9UHI7 598 aa18.57■□□□□ 0.56
SHKBP1-225ENST00000600733 SCML1Q9UN30 329 aa18.57■□□□□ 0.56
SHKBP1-225ENST00000600733 ENTPD2Q9Y5L3 495 aa18.57■□□□□ 0.56
SHKBP1-225ENST00000600733 TRBV2A0A0J9YWF9 115 aa18.57■□□□□ 0.56
SHKBP1-225ENST00000600733 OR2W5A6NFC9 320 aa18.57■□□□□ 0.56
SHKBP1-225ENST00000600733 TGFBR3LH3BV60 316 aa18.57■□□□□ 0.56
SHKBP1-225ENST00000600733 SELENOFO60613 162 aa18.57■□□□□ 0.56
SHKBP1-225ENST00000600733 TSC22D2O75157 780 aa18.57■□□□□ 0.56
SHKBP1-225ENST00000600733 SERPINA3P01011 423 aa18.57■□□□□ 0.56
SHKBP1-225ENST00000600733 OR2T7P0C7T2 308 aa18.57■□□□□ 0.56
SHKBP1-225ENST00000600733 TYRP1P17643 537 aa18.57■□□□□ 0.56
SHKBP1-225ENST00000600733 GBX2P52951 348 aaPredicted RBP18.57■□□□□ 0.56
SHKBP1-225ENST00000600733 ZNHIT3Q15649 155 aaPredicted RBP18.57■□□□□ 0.56
SHKBP1-225ENST00000600733 ULK3Q6PHR2 472 aa18.57■□□□□ 0.56
SHKBP1-225ENST00000600733 CREB3L2Q70SY1 520 aa18.57■□□□□ 0.56
SHKBP1-225ENST00000600733 TIGD4Q8IY51 512 aa18.57■□□□□ 0.56
SHKBP1-225ENST00000600733 OR2T27Q8NH04 317 aa18.57■□□□□ 0.56
SHKBP1-225ENST00000600733 HAVCR2Q8TDQ0 301 aa18.57■□□□□ 0.56
SHKBP1-225ENST00000600733 SLC37A2Q8TED4 501 aa18.57■□□□□ 0.56
SHKBP1-225ENST00000600733 SPACA7Q96KW9 195 aa18.57■□□□□ 0.56
SHKBP1-225ENST00000600733 CITED4Q96RK1 184 aa18.57■□□□□ 0.56
SHKBP1-225ENST00000600733 NMNAT3Q96T66 252 aa18.57■□□□□ 0.56
SHKBP1-225ENST00000600733 ZNF222Q9UK12 451 aa18.57■□□□□ 0.56
SHKBP1-225ENST00000600733 ICAM5Q9UMF0 924 aa18.57■□□□□ 0.56
SHKBP1-225ENST00000600733 COPS3Q9UNS2 423 aa18.57■□□□□ 0.56
SHKBP1-225ENST00000600733 LRP4O75096 1905 aa18.56■□□□□ 0.56
SHKBP1-225ENST00000600733 TEX13CA0A0J9YWL9 993 aa18.56■□□□□ 0.56
SHKBP1-225ENST00000600733 SYPP08247 313 aa18.56■□□□□ 0.56
SHKBP1-225ENST00000600733 STOMP27105 288 aa18.56■□□□□ 0.56
SHKBP1-225ENST00000600733 CTHP32929 405 aa18.56■□□□□ 0.56
SHKBP1-225ENST00000600733 RPL4P36578 427 aaKnown RBP18.56■□□□□ 0.56
SHKBP1-225ENST00000600733 MMP15P51511 669 aa18.56■□□□□ 0.56
SHKBP1-225ENST00000600733 ACTA2P62736 377 aa18.56■□□□□ 0.56
SHKBP1-225ENST00000600733 ACTG2P63267 376 aa18.56■□□□□ 0.56
SHKBP1-225ENST00000600733 NPSR1Q6W5P4 371 aa18.56■□□□□ 0.56
SHKBP1-225ENST00000600733 UBE2Q1Q7Z7E8 422 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms