RNA–Protein interactions for RNA: ENST00000600552.5

SHKBP1-223, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-223ENST00000600552 ANKRD42Q8N9B4 389 aa15.48■□□□□ 0.07
SHKBP1-223ENST00000600552 FAM71CQ8NEG0 241 aa15.48■□□□□ 0.07
SHKBP1-223ENST00000600552 TESCQ96BS2 214 aa15.48■□□□□ 0.07
SHKBP1-223ENST00000600552 RADILQ96JH8 1075 aa15.48■□□□□ 0.07
SHKBP1-223ENST00000600552 TEX37Q96LM6 180 aa15.48■□□□□ 0.07
SHKBP1-223ENST00000600552 ADAD1Q96M93 576 aaKnown RBP15.48■□□□□ 0.07
SHKBP1-223ENST00000600552 PANX1Q96RD7 426 aa15.48■□□□□ 0.07
SHKBP1-223ENST00000600552 NAA11Q9BSU3 229 aaPredicted RBP15.48■□□□□ 0.07
SHKBP1-223ENST00000600552 TMEM109Q9BVC6 243 aa15.48■□□□□ 0.07
SHKBP1-223ENST00000600552 SAP130Q9H0E3 1048 aa15.48■□□□□ 0.07
SHKBP1-223ENST00000600552 BARX1Q9HBU1 254 aaPredicted RBP15.48■□□□□ 0.07
SHKBP1-223ENST00000600552 TMEM181Q9P2C4 612 aa15.48■□□□□ 0.07
SHKBP1-223ENST00000600552 ATP23Q9Y6H3 246 aa15.48■□□□□ 0.07
SHKBP1-223ENST00000600552 IGKV3D-15A0A087WSY6 115 aa15.47■□□□□ 0.07
SHKBP1-223ENST00000600552 GOLGA8QA0A0J9YX86 632 aa15.47■□□□□ 0.07
SHKBP1-223ENST00000600552 GOLGA8OA6NCC3 632 aa15.47■□□□□ 0.07
SHKBP1-223ENST00000600552 GOLGA8NF8WBI6 632 aa15.47■□□□□ 0.07
SHKBP1-223ENST00000600552 CHRM4P08173 479 aa15.47■□□□□ 0.07
SHKBP1-223ENST00000600552 CDKN2CP42773 168 aa15.47■□□□□ 0.07
SHKBP1-223ENST00000600552 POLR2HP52434 150 aaKnown RBP15.47■□□□□ 0.07
SHKBP1-223ENST00000600552 SLC35A1P78382 337 aa15.47■□□□□ 0.07
SHKBP1-223ENST00000600552 IRX1P78414 480 aaPredicted RBP15.47■□□□□ 0.07
SHKBP1-223ENST00000600552 PDK3Q15120 406 aa15.47■□□□□ 0.07
SHKBP1-223ENST00000600552 CEP85LQ5SZL2 805 aa15.47■□□□□ 0.07
SHKBP1-223ENST00000600552 HHATQ5VTY9 493 aa15.47■□□□□ 0.07
SHKBP1-223ENST00000600552 NXNQ6DKJ4 435 aa15.47■□□□□ 0.07
SHKBP1-223ENST00000600552 HMBOX1Q6NT76 420 aa15.47■□□□□ 0.07
SHKBP1-223ENST00000600552 FBXL14Q8N1E6 418 aa15.47■□□□□ 0.07
SHKBP1-223ENST00000600552 WDR60Q8WVS4 1066 aa15.47■□□□□ 0.07
SHKBP1-223ENST00000600552 DDIT4LQ96D03 193 aa15.47■□□□□ 0.07
SHKBP1-223ENST00000600552 OR52E6Q96RD3 313 aa15.47■□□□□ 0.07
SHKBP1-223ENST00000600552 ZBTB18Q99592 522 aa15.47■□□□□ 0.07
SHKBP1-223ENST00000600552 OSGIN1Q9UJX0 560 aa15.47■□□□□ 0.07
SHKBP1-223ENST00000600552 SLC25A15Q9Y619 301 aa15.47■□□□□ 0.07
SHKBP1-223ENST00000600552 DNHD1Q96M86 4753 aa15.46■□□□□ 0.07
SHKBP1-223ENST00000600552 FAM234BA2RU67 622 aa15.46■□□□□ 0.07
SHKBP1-223ENST00000600552 TM9SF1O15321 606 aa15.46■□□□□ 0.07
SHKBP1-223ENST00000600552 GPRIN2O60269 458 aa15.46■□□□□ 0.07
SHKBP1-223ENST00000600552 ALDOCP09972 364 aaKnown RBP15.46■□□□□ 0.07
SHKBP1-223ENST00000600552 DHRS4L1P0CG22 281 aa15.46■□□□□ 0.07
SHKBP1-223ENST00000600552 KITP10721 976 aa15.46■□□□□ 0.07
SHKBP1-223ENST00000600552 IL7RP16871 459 aa15.46■□□□□ 0.07
SHKBP1-223ENST00000600552 CD40P25942 277 aa15.46■□□□□ 0.07
SHKBP1-223ENST00000600552 HTR3AP46098 478 aa15.46■□□□□ 0.07
SHKBP1-223ENST00000600552 PLAURQ03405 335 aa15.46■□□□□ 0.07
SHKBP1-223ENST00000600552 BST1Q10588 318 aa15.46■□□□□ 0.07
SHKBP1-223ENST00000600552 MPP2Q14168 576 aa15.46■□□□□ 0.07
SHKBP1-223ENST00000600552 GABRA6Q16445 453 aa15.46■□□□□ 0.07
SHKBP1-223ENST00000600552 COX20Q5RI15 118 aa15.46■□□□□ 0.07
SHKBP1-223ENST00000600552 DNAJC14Q6Y2X3 702 aaPredicted RBP15.46■□□□□ 0.07
SHKBP1-223ENST00000600552 CADM2Q8N3J6 435 aa15.46■□□□□ 0.07
SHKBP1-223ENST00000600552 TRIML2Q8N7C3 387 aa15.46■□□□□ 0.07
SHKBP1-223ENST00000600552 CCDC115Q96NT0 180 aa15.46■□□□□ 0.07
SHKBP1-223ENST00000600552 DHRS9Q9BPW9 319 aa15.46■□□□□ 0.07
SHKBP1-223ENST00000600552 WDR55Q9H6Y2 383 aaPredicted RBP15.46■□□□□ 0.07
SHKBP1-223ENST00000600552 TAS2R16Q9NYV7 291 aa15.46■□□□□ 0.07
SHKBP1-223ENST00000600552 BTNL2Q9UIR0 455 aa15.46■□□□□ 0.07
SHKBP1-223ENST00000600552 MGAT4BQ9UQ53 548 aa15.46■□□□□ 0.07
SHKBP1-223ENST00000600552 PLCE1Q9P212 2302 aa15.45■□□□□ 0.06
SHKBP1-223ENST00000600552 IGHV4-30-2A0A087WSY4 118 aa15.45■□□□□ 0.06
SHKBP1-223ENST00000600552 ZC3H12DA2A288 527 aaKnown RBP15.45■□□□□ 0.06
SHKBP1-223ENST00000600552 ITGA5P08648 1049 aa15.45■□□□□ 0.06
SHKBP1-223ENST00000600552 GKN3PP0CG01 181 aa15.45■□□□□ 0.06
SHKBP1-223ENST00000600552 IMPDH2P12268 514 aa15.45■□□□□ 0.06
SHKBP1-223ENST00000600552 PTAFRP25105 342 aa15.45■□□□□ 0.06
SHKBP1-223ENST00000600552 IL12AP29459 219 aa15.45■□□□□ 0.06
SHKBP1-223ENST00000600552 TTKP33981 857 aa15.45■□□□□ 0.06
SHKBP1-223ENST00000600552 CLK1P49759 484 aaKnown RBP15.45■□□□□ 0.06
SHKBP1-223ENST00000600552 ANXA11P50995 505 aaKnown RBP15.45■□□□□ 0.06
SHKBP1-223ENST00000600552 CEACAM7Q14002 265 aa15.45■□□□□ 0.06
SHKBP1-223ENST00000600552 GNA13Q14344 377 aa15.45■□□□□ 0.06
SHKBP1-223ENST00000600552 RAB35Q15286 201 aa15.45■□□□□ 0.06
SHKBP1-223ENST00000600552 DPY19L1Q2PZI1 675 aa15.45■□□□□ 0.06
SHKBP1-223ENST00000600552 B3GLCTQ6Y288 498 aa15.45■□□□□ 0.06
SHKBP1-223ENST00000600552 CXXC5Q7LFL8 322 aaKnown RBP15.45■□□□□ 0.06
SHKBP1-223ENST00000600552 DTX2Q86UW9 622 aa15.45■□□□□ 0.06
SHKBP1-223ENST00000600552 MUC15Q8N387 334 aa15.45■□□□□ 0.06
SHKBP1-223ENST00000600552 MGARPQ8TDB4 240 aa15.45■□□□□ 0.06
SHKBP1-223ENST00000600552 TRNT1Q96Q11 434 aaKnown RBP15.45■□□□□ 0.06
SHKBP1-223ENST00000600552 SLC38A1Q9H2H9 487 aa15.45■□□□□ 0.06
SHKBP1-223ENST00000600552 MTHFD2LQ9H903 347 aaPredicted RBP15.45■□□□□ 0.06
SHKBP1-223ENST00000600552 MEAF6Q9HAF1 191 aa15.45■□□□□ 0.06
SHKBP1-223ENST00000600552 EXOSC3Q9NQT5 275 aaKnown RBP15.45■□□□□ 0.06
SHKBP1-223ENST00000600552 SLC7A10Q9NS82 523 aa15.45■□□□□ 0.06
SHKBP1-223ENST00000600552 CBLN4Q9NTU7 201 aa15.45■□□□□ 0.06
SHKBP1-223ENST00000600552 CFAP73A6NFT4 308 aa15.44■□□□□ 0.06
SHKBP1-223ENST00000600552 AGAP5A6NIR3 686 aa15.44■□□□□ 0.06
SHKBP1-223ENST00000600552 SDHDO14521 159 aa15.44■□□□□ 0.06
SHKBP1-223ENST00000600552 KLF11O14901 512 aa15.44■□□□□ 0.06
SHKBP1-223ENST00000600552 CD5LO43866 347 aa15.44■□□□□ 0.06
SHKBP1-223ENST00000600552 AKR7A3O95154 331 aa15.44■□□□□ 0.06
SHKBP1-223ENST00000600552 GUSBP08236 651 aa15.44■□□□□ 0.06
SHKBP1-223ENST00000600552 UQCRBP14927 111 aa15.44■□□□□ 0.06
SHKBP1-223ENST00000600552 CXCR1P25024 350 aa15.44■□□□□ 0.06
SHKBP1-223ENST00000600552 FKBP2P26885 142 aaKnown RBP15.44■□□□□ 0.06
SHKBP1-223ENST00000600552 EPHA3P29320 983 aa15.44■□□□□ 0.06
SHKBP1-223ENST00000600552 BNIP2Q12982 314 aa15.44■□□□□ 0.06
SHKBP1-223ENST00000600552 OR7A5Q15622 319 aa15.44■□□□□ 0.06
SHKBP1-223ENST00000600552 NRF1Q16656 503 aa15.44■□□□□ 0.06
SHKBP1-223ENST00000600552 OTUD3Q5T2D3 398 aaPredicted RBP15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms