RNA–Protein interactions for RNA: ENST00000600137.5

VRK3-219, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 822 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-219ENST00000600137 MRGPRGQ86SM5 289 aa12.3□□□□□ -0.44
VRK3-219ENST00000600137 EID3Q8N140 333 aa12.3□□□□□ -0.44
VRK3-219ENST00000600137 SLC25A43Q8WUT9 341 aaPredicted RBP12.3□□□□□ -0.44
VRK3-219ENST00000600137 DNAJA4Q8WW22 397 aaPredicted RBP12.3□□□□□ -0.44
VRK3-219ENST00000600137 RND1Q92730 232 aa12.3□□□□□ -0.44
VRK3-219ENST00000600137 C7orf34Q96L11 122 aa12.3□□□□□ -0.44
VRK3-219ENST00000600137 PSMG3-AS1Q96PY0 264 aa12.3□□□□□ -0.44
VRK3-219ENST00000600137 PRSS27Q9BQR3 290 aa12.3□□□□□ -0.44
VRK3-219ENST00000600137 POTEKPQ9BYX7 375 aa12.3□□□□□ -0.44
VRK3-219ENST00000600137 AMBRA1Q9C0C7 1298 aa12.3□□□□□ -0.44
VRK3-219ENST00000600137 RNF122Q9H9V4 155 aa12.3□□□□□ -0.44
VRK3-219ENST00000600137 ING1Q9UK53 422 aaPredicted RBP12.3□□□□□ -0.44
VRK3-219ENST00000600137 PRPF19Q9UMS4 504 aaKnown RBP12.3□□□□□ -0.44
VRK3-219ENST00000600137 ADGRG4Q8IZF6 3080 aa12.3□□□□□ -0.44
VRK3-219ENST00000600137 A0A087WUJ7 227 aa12.29□□□□□ -0.44
VRK3-219ENST00000600137 SLC22A20A6NK97 555 aa12.29□□□□□ -0.44
VRK3-219ENST00000600137 GJE1A6NN92 205 aa12.29□□□□□ -0.44
VRK3-219ENST00000600137 ZNF814B7Z6K7 855 aa12.29□□□□□ -0.44
VRK3-219ENST00000600137 FFAR1O14842 300 aa12.29□□□□□ -0.44
VRK3-219ENST00000600137 SEMG1P04279 462 aa12.29□□□□□ -0.44
VRK3-219ENST00000600137 AGAP20933 346 aa12.29□□□□□ -0.44
VRK3-219ENST00000600137 ENPP1P22413 925 aa12.29□□□□□ -0.44
VRK3-219ENST00000600137 CXCR1P25024 350 aa12.29□□□□□ -0.44
VRK3-219ENST00000600137 DIO1P49895 249 aa12.29□□□□□ -0.44
VRK3-219ENST00000600137 AGFG1P52594 562 aaKnown RBP12.29□□□□□ -0.44
VRK3-219ENST00000600137 PER3P56645 1201 aa12.29□□□□□ -0.44
VRK3-219ENST00000600137 H3F3AP84243 136 aa12.29□□□□□ -0.44
VRK3-219ENST00000600137 TRIM25Q14258 630 aaKnown RBP12.29□□□□□ -0.44
VRK3-219ENST00000600137 ZNF239Q16600 458 aaKnown RBP12.29□□□□□ -0.44
VRK3-219ENST00000600137 ZNF613Q6PF04 617 aa12.29□□□□□ -0.44
VRK3-219ENST00000600137 ZNF808Q8N4W9 903 aaPredicted RBP12.29□□□□□ -0.44
VRK3-219ENST00000600137 LILRB4Q8NHJ6 448 aa12.29□□□□□ -0.44
VRK3-219ENST00000600137 STK35Q8TDR2 534 aa12.29□□□□□ -0.44
VRK3-219ENST00000600137 ADAMTS16Q8TE57 1224 aa12.29□□□□□ -0.44
VRK3-219ENST00000600137 ROBO4Q8WZ75 1007 aa12.29□□□□□ -0.44
VRK3-219ENST00000600137 PROX1Q92786 737 aa12.29□□□□□ -0.44
VRK3-219ENST00000600137 DNAJA3Q96EY1 480 aa12.29□□□□□ -0.44
VRK3-219ENST00000600137 TPD52L3Q96J77 140 aa12.29□□□□□ -0.44
VRK3-219ENST00000600137 HSH2DQ96JZ2 352 aa12.29□□□□□ -0.44
VRK3-219ENST00000600137 OR5B2Q96R09 309 aa12.29□□□□□ -0.44
VRK3-219ENST00000600137 BTBD10Q9BSF8 475 aa12.29□□□□□ -0.44
VRK3-219ENST00000600137 ZNF426Q9BUY5 554 aa12.29□□□□□ -0.44
VRK3-219ENST00000600137 PTDSS2Q9BVG9 487 aa12.29□□□□□ -0.44
VRK3-219ENST00000600137 TMEM27Q9HBJ8 222 aa12.29□□□□□ -0.44
VRK3-219ENST00000600137 PAQR5Q9NXK6 330 aaPredicted RBP12.29□□□□□ -0.44
VRK3-219ENST00000600137 MAGEL2Q9UJ55 1249 aa12.29□□□□□ -0.44
VRK3-219ENST00000600137 SLC13A4Q9UKG4 626 aa12.29□□□□□ -0.44
VRK3-219ENST00000600137 A4GNTQ9UNA3 340 aa12.29□□□□□ -0.44
VRK3-219ENST00000600137 TRAPPC4Q9Y296 219 aa12.29□□□□□ -0.44
VRK3-219ENST00000600137 HDGFL3Q9Y3E1 203 aa12.29□□□□□ -0.44
VRK3-219ENST00000600137 FREM1Q5H8C1 2179 aa12.28□□□□□ -0.44
VRK3-219ENST00000600137 TCRBV5S2A0A599 114 aa12.28□□□□□ -0.44
VRK3-219ENST00000600137 CPSF4LA6NMK7 179 aaKnown RBP12.28□□□□□ -0.44
VRK3-219ENST00000600137 A8MVM7 634 aa12.28□□□□□ -0.44
VRK3-219ENST00000600137 FTCDNL1E5RQL4 147 aa12.28□□□□□ -0.44
VRK3-219ENST00000600137 ACOT8O14734 319 aa12.28□□□□□ -0.44
VRK3-219ENST00000600137 SMAD9O15198 467 aaKnown RBP12.28□□□□□ -0.44
VRK3-219ENST00000600137 GSC2O15499 205 aa12.28□□□□□ -0.44
VRK3-219ENST00000600137 TNFSF13O75888 250 aa12.28□□□□□ -0.44
VRK3-219ENST00000600137 PDE5AO76074 875 aa12.28□□□□□ -0.44
VRK3-219ENST00000600137 PRKD3O94806 890 aa12.28□□□□□ -0.44
VRK3-219ENST00000600137 PRSS23O95084 383 aa12.28□□□□□ -0.44
VRK3-219ENST00000600137 PMS2P2O95744 297 aa12.28□□□□□ -0.44
VRK3-219ENST00000600137 ZNF682O95780 498 aa12.28□□□□□ -0.44
VRK3-219ENST00000600137 ATP6V1B2P21281 511 aa12.28□□□□□ -0.44
VRK3-219ENST00000600137 KIR2DL2P43627 348 aaPredicted RBP12.28□□□□□ -0.44
VRK3-219ENST00000600137 LTBQ06643 244 aa12.28□□□□□ -0.44
VRK3-219ENST00000600137 PIN1Q13526 163 aaPredicted RBP12.28□□□□□ -0.44
VRK3-219ENST00000600137 SGCBQ16585 318 aa12.28□□□□□ -0.44
VRK3-219ENST00000600137 ALG10BQ5I7T1 473 aa12.28□□□□□ -0.44
VRK3-219ENST00000600137 PDSS1Q5T2R2 415 aa12.28□□□□□ -0.44
VRK3-219ENST00000600137 XKRXQ6PP77 449 aa12.28□□□□□ -0.44
VRK3-219ENST00000600137 GDF7Q7Z4P5 450 aa12.28□□□□□ -0.44
VRK3-219ENST00000600137 RANBP3LQ86VV4 465 aaPredicted RBP12.28□□□□□ -0.44
VRK3-219ENST00000600137 FAM162AQ96A26 154 aa12.28□□□□□ -0.44
VRK3-219ENST00000600137 SDCCAG3Q96C92 435 aa12.28□□□□□ -0.44
VRK3-219ENST00000600137 KTI12Q96EK9 354 aaPredicted RBP12.28□□□□□ -0.44
VRK3-219ENST00000600137 SLC47A1Q96FL8 570 aa12.28□□□□□ -0.44
VRK3-219ENST00000600137 TM9SF2Q99805 663 aa12.28□□□□□ -0.44
VRK3-219ENST00000600137 THTPAQ9BU02 230 aa12.28□□□□□ -0.44
VRK3-219ENST00000600137 CADM1Q9BY67 442 aaKnown RBP12.28□□□□□ -0.44
VRK3-219ENST00000600137 ADPRHL2Q9NX46 363 aa12.28□□□□□ -0.44
VRK3-219ENST00000600137 ACTR3BQ9P1U1 418 aa12.28□□□□□ -0.44
VRK3-219ENST00000600137 SLC9A8Q9Y2E8 581 aa12.28□□□□□ -0.44
VRK3-219ENST00000600137 SPIN1Q9Y657 262 aaPredicted RBP12.28□□□□□ -0.44
VRK3-219ENST00000600137 HCFC1P51610 2035 aa12.28□□□□□ -0.44
VRK3-219ENST00000600137 IGHV3-15A0A0B4J1V0 119 aa12.27□□□□□ -0.45
VRK3-219ENST00000600137 TRAPPC13A5PLN9 417 aa12.27□□□□□ -0.45
VRK3-219ENST00000600137 LIPT2A6NK58 231 aa12.27□□□□□ -0.45
VRK3-219ENST00000600137 HSPB2A8KAH6 182 aa12.27□□□□□ -0.45
VRK3-219ENST00000600137 J3KTA2 159 aa12.27□□□□□ -0.45
VRK3-219ENST00000600137 SULT2B1O00204 365 aa12.27□□□□□ -0.45
VRK3-219ENST00000600137 GYG2O15488 501 aa12.27□□□□□ -0.45
VRK3-219ENST00000600137 CHP2O43745 196 aa12.27□□□□□ -0.45
VRK3-219ENST00000600137 RAMP1O60894 148 aa12.27□□□□□ -0.45
VRK3-219ENST00000600137 CLDN1O95832 211 aa12.27□□□□□ -0.45
VRK3-219ENST00000600137 IL2RAP01589 272 aa12.27□□□□□ -0.45
VRK3-219ENST00000600137 TFPIP10646 304 aa12.27□□□□□ -0.45
VRK3-219ENST00000600137 PNMTP11086 282 aa12.27□□□□□ -0.45
VRK3-219ENST00000600137 CTSSP25774 331 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms