RNA–Protein interactions for RNA: ENST00000597965.2

PNKP-210, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 351 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-210ENST00000597965 ALPK2Q86TB3 2170 aa14.95□□□□□ -0.02
PNKP-210ENST00000597965 ANK3Q12955 4377 aaKnown RBP14.95□□□□□ -0.02
PNKP-210ENST00000597965 KIAA0513O60268 411 aa14.95□□□□□ -0.02
PNKP-210ENST00000597965 GPRIN2O60269 458 aa14.95□□□□□ -0.02
PNKP-210ENST00000597965 SKAP2O75563 359 aaPredicted RBP14.95□□□□□ -0.02
PNKP-210ENST00000597965 G6PDP11413 515 aa14.95□□□□□ -0.02
PNKP-210ENST00000597965 EDNRAP25101 427 aa14.95□□□□□ -0.02
PNKP-210ENST00000597965 APOBEC3AP31941 199 aaPredicted RBP14.95□□□□□ -0.02
PNKP-210ENST00000597965 RPS26P62854 115 aaKnown RBP14.95□□□□□ -0.02
PNKP-210ENST00000597965 SLC35A1P78382 337 aa14.95□□□□□ -0.02
PNKP-210ENST00000597965 GABRA6Q16445 453 aa14.95□□□□□ -0.02
PNKP-210ENST00000597965 TTMPQ5BVD1 217 aa14.95□□□□□ -0.02
PNKP-210ENST00000597965 ANXA8L1Q5VT79 327 aa14.95□□□□□ -0.02
PNKP-210ENST00000597965 KLHL24Q6TFL4 600 aa14.95□□□□□ -0.02
PNKP-210ENST00000597965 CMIPQ8IY22 773 aa14.95□□□□□ -0.02
PNKP-210ENST00000597965 ARFGAP2Q8N6H7 521 aa14.95□□□□□ -0.02
PNKP-210ENST00000597965 OR8J2Q8NGG1 315 aa14.95□□□□□ -0.02
PNKP-210ENST00000597965 OR4A15Q8NGL6 344 aa14.95□□□□□ -0.02
PNKP-210ENST00000597965 ZNF524Q96C55 264 aa14.95□□□□□ -0.02
PNKP-210ENST00000597965 C3orf30Q96M34 536 aa14.95□□□□□ -0.02
PNKP-210ENST00000597965 CTPS2Q9NRF8 586 aa14.95□□□□□ -0.02
PNKP-210ENST00000597965 ST6GALNAC1Q9NSC7 600 aaPredicted RBP14.95□□□□□ -0.02
PNKP-210ENST00000597965 GIMAP2Q9UG22 337 aa14.95□□□□□ -0.02
PNKP-210ENST00000597965 KCNE5Q9UJ90 142 aa14.95□□□□□ -0.02
PNKP-210ENST00000597965 PRDM4Q9UKN5 801 aa14.95□□□□□ -0.02
PNKP-210ENST00000597965 FKBP7Q9Y680 259 aa14.95□□□□□ -0.02
PNKP-210ENST00000597965 HEATR1Q9H583 2144 aaKnown RBP14.95□□□□□ -0.02
PNKP-210ENST00000597965 A0A096LNT2 108 aa14.94□□□□□ -0.02
PNKP-210ENST00000597965 TLDC2A0PJX2 215 aa14.94□□□□□ -0.02
PNKP-210ENST00000597965 NDUFS8O00217 210 aa14.94□□□□□ -0.02
PNKP-210ENST00000597965 WNT11O96014 354 aa14.94□□□□□ -0.02
PNKP-210ENST00000597965 USF1P22415 310 aaPredicted RBP14.94□□□□□ -0.02
PNKP-210ENST00000597965 UQCRC2P22695 453 aa14.94□□□□□ -0.02
PNKP-210ENST00000597965 GZMKP49863 264 aa14.94□□□□□ -0.02
PNKP-210ENST00000597965 PRPS1P60891 318 aa14.94□□□□□ -0.02
PNKP-210ENST00000597965 KCNJ10P78508 379 aa14.94□□□□□ -0.02
PNKP-210ENST00000597965 GNA13Q14344 377 aa14.94□□□□□ -0.02
PNKP-210ENST00000597965 ABHD12BQ7Z5M8 362 aaPredicted RBP14.94□□□□□ -0.02
PNKP-210ENST00000597965 KIRREL3Q8IZU9 778 aa14.94□□□□□ -0.02
PNKP-210ENST00000597965 ZNF525Q8N782 197 aa14.94□□□□□ -0.02
PNKP-210ENST00000597965 GOLGA6L1Q8N7Z2 621 aa14.94□□□□□ -0.02
PNKP-210ENST00000597965 XAGE5Q8WWM1 108 aa14.94□□□□□ -0.02
PNKP-210ENST00000597965 PKNOX2Q96KN3 472 aa14.94□□□□□ -0.02
PNKP-210ENST00000597965 MECRQ9BV79 373 aa14.94□□□□□ -0.02
PNKP-210ENST00000597965 SAP130Q9H0E3 1048 aa14.94□□□□□ -0.02
PNKP-210ENST00000597965 OR51I1Q9H343 314 aa14.94□□□□□ -0.02
PNKP-210ENST00000597965 ATP23Q9Y6H3 246 aa14.94□□□□□ -0.02
PNKP-210ENST00000597965 PRSS51A0A1B0GVH4 220 aa14.93□□□□□ -0.02
PNKP-210ENST00000597965 ZNF208O43345 1280 aa14.93□□□□□ -0.02
PNKP-210ENST00000597965 SNUPNO95149 360 aaKnown RBP14.93□□□□□ -0.02
PNKP-210ENST00000597965 PTNP21246 168 aa14.93□□□□□ -0.02
PNKP-210ENST00000597965 RYKP34925 604 aa14.93□□□□□ -0.02
PNKP-210ENST00000597965 KHKP50053 298 aa14.93□□□□□ -0.02
PNKP-210ENST00000597965 ANXA11P50995 505 aaKnown RBP14.93□□□□□ -0.02
PNKP-210ENST00000597965 OR2B6P58173 313 aa14.93□□□□□ -0.02
PNKP-210ENST00000597965 TXNL4AP83876 142 aaKnown RBP14.93□□□□□ -0.02
PNKP-210ENST00000597965 H3F3AP84243 136 aa14.93□□□□□ -0.02
PNKP-210ENST00000597965 DPY19L1Q2PZI1 675 aa14.93□□□□□ -0.02
PNKP-210ENST00000597965 AGBL2Q5U5Z8 902 aa14.93□□□□□ -0.02
PNKP-210ENST00000597965 OR4F3Q6IEY1 312 aa14.93□□□□□ -0.02
PNKP-210ENST00000597965 TYW3Q6IPR3 259 aaKnown RBP14.93□□□□□ -0.02
PNKP-210ENST00000597965 CASP12Q6UXS9 341 aa14.93□□□□□ -0.02
PNKP-210ENST00000597965 C10orf105Q8TEF2 133 aa14.93□□□□□ -0.02
PNKP-210ENST00000597965 ROPN1LQ96C74 230 aa14.93□□□□□ -0.02
PNKP-210ENST00000597965 ARL5BQ96KC2 179 aa14.93□□□□□ -0.02
PNKP-210ENST00000597965 DPY30Q9C005 99 aa14.93□□□□□ -0.02
PNKP-210ENST00000597965 SERHL2Q9H4I8 314 aa14.93□□□□□ -0.02
PNKP-210ENST00000597965 MOV10Q9HCE1 1003 aaKnown RBP14.93□□□□□ -0.02
PNKP-210ENST00000597965 MYOZ1Q9NP98 299 aaPredicted RBP14.93□□□□□ -0.02
PNKP-210ENST00000597965 OBP2BQ9NPH6 170 aa14.93□□□□□ -0.02
PNKP-210ENST00000597965 ZDHHC2Q9UIJ5 367 aa14.93□□□□□ -0.02
PNKP-210ENST00000597965 FBXO9Q9UK97 447 aaPredicted RBP14.93□□□□□ -0.02
PNKP-210ENST00000597965 CUBNO60494 3623 aa14.92□□□□□ -0.02
PNKP-210ENST00000597965 ITGA5P08648 1049 aa14.92□□□□□ -0.02
PNKP-210ENST00000597965 MYZAPP0CAP1 466 aa14.92□□□□□ -0.02
PNKP-210ENST00000597965 OR12D1P0DN82 309 aa14.92□□□□□ -0.02
PNKP-210ENST00000597965 HNF1AP20823 631 aa14.92□□□□□ -0.02
PNKP-210ENST00000597965 MPGP29372 298 aa14.92□□□□□ -0.02
PNKP-210ENST00000597965 IDH2P48735 452 aaKnown RBP14.92□□□□□ -0.02
PNKP-210ENST00000597965 POLR2HP52434 150 aaKnown RBP14.92□□□□□ -0.02
PNKP-210ENST00000597965 PHC1P78364 1004 aa14.92□□□□□ -0.02
PNKP-210ENST00000597965 LSM11P83369 360 aaKnown RBP eCLIP14.92□□□□□ -0.02
PNKP-210ENST00000597965 SPOCK1Q08629 439 aa14.92□□□□□ -0.02
PNKP-210ENST00000597965 IFFO1Q0D2I5 559 aa14.92□□□□□ -0.02
PNKP-210ENST00000597965 GPAT3Q53EU6 434 aa14.92□□□□□ -0.02
PNKP-210ENST00000597965 ZCCHC23Q6ZST2 131 aa14.92□□□□□ -0.02
PNKP-210ENST00000597965 CROCCP2Q86T23 111 aa14.92□□□□□ -0.02
PNKP-210ENST00000597965 ADGRG3Q86Y34 549 aa14.92□□□□□ -0.02
PNKP-210ENST00000597965 CLECL1Q8IZS7 167 aa14.92□□□□□ -0.02
PNKP-210ENST00000597965 TRIML2Q8N7C3 387 aa14.92□□□□□ -0.02
PNKP-210ENST00000597965 TCP10LQ8TDR4 215 aa14.92□□□□□ -0.02
PNKP-210ENST00000597965 ATP6V1G3Q96LB4 118 aa14.92□□□□□ -0.02
PNKP-210ENST00000597965 KCNS3Q9BQ31 491 aa14.92□□□□□ -0.02
PNKP-210ENST00000597965 PIMREGQ9BSJ6 248 aa14.92□□□□□ -0.02
PNKP-210ENST00000597965 ROPN1BQ9BZX4 212 aaPredicted RBP14.92□□□□□ -0.02
PNKP-210ENST00000597965 PIF1Q9H611 641 aa14.92□□□□□ -0.02
PNKP-210ENST00000597965 MANSC1Q9H8J5 431 aa14.92□□□□□ -0.02
PNKP-210ENST00000597965 ROPN1Q9HAT0 212 aaPredicted RBP14.92□□□□□ -0.02
PNKP-210ENST00000597965 SLC17A5Q9NRA2 495 aa14.92□□□□□ -0.02
PNKP-210ENST00000597965 SLC17A7Q9P2U7 560 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms