RNA–Protein interactions for RNA: ENST00000594661.5

PNKP-204, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 2,111 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-204ENST00000594661 LRRC46Q96FV0 321 aa14.21□□□□□ -0.13
PNKP-204ENST00000594661 SPACA7Q96KW9 195 aa14.21□□□□□ -0.13
PNKP-204ENST00000594661 ZNF354BQ96LW1 612 aa14.21□□□□□ -0.13
PNKP-204ENST00000594661 ATF6BQ99941 703 aa14.21□□□□□ -0.13
PNKP-204ENST00000594661 YIPF4Q9BSR8 244 aa14.21□□□□□ -0.13
PNKP-204ENST00000594661 DNTTIP1Q9H147 329 aa14.21□□□□□ -0.13
PNKP-204ENST00000594661 EVA1AQ9H8M9 152 aa14.21□□□□□ -0.13
PNKP-204ENST00000594661 NMNAT1Q9HAN9 279 aaPredicted RBP14.21□□□□□ -0.13
PNKP-204ENST00000594661 SDHAF3Q9NRP4 125 aa14.21□□□□□ -0.13
PNKP-204ENST00000594661 STARD5Q9NSY2 213 aa14.21□□□□□ -0.13
PNKP-204ENST00000594661 NUDT15Q9NV35 164 aa14.21□□□□□ -0.13
PNKP-204ENST00000594661 ERVK-19Q9WJR5 959 aa14.21□□□□□ -0.13
PNKP-204ENST00000594661 MYO15AQ9UKN7 3530 aa14.2□□□□□ -0.14
PNKP-204ENST00000594661 TRBV4-1A0A0J9YWV2 114 aa14.2□□□□□ -0.14
PNKP-204ENST00000594661 URADA6NGE7 173 aa14.2□□□□□ -0.14
PNKP-204ENST00000594661 B3GALT2O43825 422 aa14.2□□□□□ -0.14
PNKP-204ENST00000594661 SDC3O75056 442 aa14.2□□□□□ -0.14
PNKP-204ENST00000594661 UBXN7O94888 489 aa14.2□□□□□ -0.14
PNKP-204ENST00000594661 GASTP01350 101 aa14.2□□□□□ -0.14
PNKP-204ENST00000594661 FASLGP48023 281 aa14.2□□□□□ -0.14
PNKP-204ENST00000594661 CSNK1EP49674 416 aaKnown RBP14.2□□□□□ -0.14
PNKP-204ENST00000594661 NXPH1P58417 271 aa14.2□□□□□ -0.14
PNKP-204ENST00000594661 LASP1Q14847 261 aaKnown RBP14.2□□□□□ -0.14
PNKP-204ENST00000594661 MICBQ29980 383 aa14.2□□□□□ -0.14
PNKP-204ENST00000594661 TMEM64Q6YI46 380 aa14.2□□□□□ -0.14
PNKP-204ENST00000594661 ABHD13Q7L211 337 aa14.2□□□□□ -0.14
PNKP-204ENST00000594661 RBM45Q8IUH3 476 aaKnown RBP14.2□□□□□ -0.14
PNKP-204ENST00000594661 NANPQ8TBE9 248 aa14.2□□□□□ -0.14
PNKP-204ENST00000594661 NKX6-2Q9C056 277 aaPredicted RBP14.2□□□□□ -0.14
PNKP-204ENST00000594661 SEMA6CQ9H3T2 930 aa14.2□□□□□ -0.14
PNKP-204ENST00000594661 GPR160Q9UJ42 338 aa14.2□□□□□ -0.14
PNKP-204ENST00000594661 MKL2Q9ULH7 1088 aa14.2□□□□□ -0.14
PNKP-204ENST00000594661 DAPP1Q9UN19 280 aa14.2□□□□□ -0.14
PNKP-204ENST00000594661 SPAG17Q6Q759 2223 aa14.2□□□□□ -0.14
PNKP-204ENST00000594661 TEX13CA0A0J9YWL9 993 aa14.2□□□□□ -0.14
PNKP-204ENST00000594661 ARRDC5A6NEK1 342 aa14.2□□□□□ -0.14
PNKP-204ENST00000594661 D6RAR5 112 aa14.2□□□□□ -0.14
PNKP-204ENST00000594661 SGCEO43556 437 aa14.2□□□□□ -0.14
PNKP-204ENST00000594661 ACAA1P09110 424 aaPredicted RBP14.2□□□□□ -0.14
PNKP-204ENST00000594661 BUD31P41223 144 aaPredicted RBP14.2□□□□□ -0.14
PNKP-204ENST00000594661 MC3RP41968 323 aa14.2□□□□□ -0.14
PNKP-204ENST00000594661 CXCL12P48061 93 aa14.2□□□□□ -0.14
PNKP-204ENST00000594661 RAG2P55895 527 aa14.2□□□□□ -0.14
PNKP-204ENST00000594661 RPS7P62081 194 aaKnown RBP14.2□□□□□ -0.14
PNKP-204ENST00000594661 SIM1P81133 766 aaPredicted RBP14.2□□□□□ -0.14
PNKP-204ENST00000594661 C1DQ13901 141 aaKnown RBP14.2□□□□□ -0.14
PNKP-204ENST00000594661 ZNF124Q15973 351 aa14.2□□□□□ -0.14
PNKP-204ENST00000594661 SWI5Q1ZZU3 235 aa14.2□□□□□ -0.14
PNKP-204ENST00000594661 DEFB133Q30KQ1 61 aa14.2□□□□□ -0.14
PNKP-204ENST00000594661 B3GNTL1Q67FW5 361 aaPredicted RBP14.2□□□□□ -0.14
PNKP-204ENST00000594661 TCTN3Q6NUS6 607 aa14.2□□□□□ -0.14
PNKP-204ENST00000594661 SEZ6L2Q6UXD5 910 aa14.2□□□□□ -0.14
PNKP-204ENST00000594661 TMEM91Q6ZNR0 172 aa14.2□□□□□ -0.14
PNKP-204ENST00000594661 OLIG3Q7RTU3 272 aa14.2□□□□□ -0.14
PNKP-204ENST00000594661 CSNK1A1LQ8N752 337 aa14.2□□□□□ -0.14
PNKP-204ENST00000594661 OR2T35Q8NGX2 323 aa14.2□□□□□ -0.14
PNKP-204ENST00000594661 MOSPD2Q8NHP6 518 aa14.2□□□□□ -0.14
PNKP-204ENST00000594661 SFXN5Q8TD22 340 aa14.2□□□□□ -0.14
PNKP-204ENST00000594661 TM9SF4Q92544 642 aa14.2□□□□□ -0.14
PNKP-204ENST00000594661 RBM14Q96PK6 669 aaKnown RBP14.2□□□□□ -0.14
PNKP-204ENST00000594661 IL21RQ9HBE5 538 aa14.2□□□□□ -0.14
PNKP-204ENST00000594661 ZNF780BQ9Y6R6 833 aa14.2□□□□□ -0.14
PNKP-204ENST00000594661 ZAR1LA6NP61 321 aa14.19□□□□□ -0.14
PNKP-204ENST00000594661 SEMA7AO75326 666 aa14.19□□□□□ -0.14
PNKP-204ENST00000594661 HMGN2P05204 90 aaKnown RBP14.19□□□□□ -0.14
PNKP-204ENST00000594661 MPIP34949 423 aa14.19□□□□□ -0.14
PNKP-204ENST00000594661 PTGES3Q15185 160 aaKnown RBP14.19□□□□□ -0.14
PNKP-204ENST00000594661 PLK5Q496M5 336 aa14.19□□□□□ -0.14
PNKP-204ENST00000594661 PTCHD4Q6ZW05 846 aa14.19□□□□□ -0.14
PNKP-204ENST00000594661 OR4D11Q8NGI4 311 aa14.19□□□□□ -0.14
PNKP-204ENST00000594661 SFT2D1Q8WV19 159 aa14.19□□□□□ -0.14
PNKP-204ENST00000594661 SENP5Q96HI0 755 aaPredicted RBP14.19□□□□□ -0.14
PNKP-204ENST00000594661 WFDC6Q9BQY6 131 aa14.19□□□□□ -0.14
PNKP-204ENST00000594661 DPAGT1Q9H3H5 408 aa14.19□□□□□ -0.14
PNKP-204ENST00000594661 ZNF768Q9H5H4 540 aaKnown RBP14.19□□□□□ -0.14
PNKP-204ENST00000594661 PRDM9Q9NQV7 894 aa14.19□□□□□ -0.14
PNKP-204ENST00000594661 FTSJ1Q9UET6 329 aa14.19□□□□□ -0.14
PNKP-204ENST00000594661 SIT1Q9Y3P8 196 aa14.19□□□□□ -0.14
PNKP-204ENST00000594661 SLC19A2O60779 497 aa14.18□□□□□ -0.14
PNKP-204ENST00000594661 EIF3GO75821 320 aaKnown RBP eCLIP14.18□□□□□ -0.14
PNKP-204ENST00000594661 RGS11O94810 467 aa14.18□□□□□ -0.14
PNKP-204ENST00000594661 H1F0P07305 194 aaKnown RBP14.18□□□□□ -0.14
PNKP-204ENST00000594661 RORAP35398 523 aa14.18□□□□□ -0.14
PNKP-204ENST00000594661 CAPZBP47756 277 aa14.18□□□□□ -0.14
PNKP-204ENST00000594661 ANXA11P50995 505 aaKnown RBP14.18□□□□□ -0.14
PNKP-204ENST00000594661 CTBP2P56545 445 aa14.18□□□□□ -0.14
PNKP-204ENST00000594661 ZP1P60852 638 aa14.18□□□□□ -0.14
PNKP-204ENST00000594661 TMEM201Q5SNT2 666 aa14.18□□□□□ -0.14
PNKP-204ENST00000594661 ZNF770Q6IQ21 691 aaPredicted RBP14.18□□□□□ -0.14
PNKP-204ENST00000594661 QSOX2Q6ZRP7 698 aa14.18□□□□□ -0.14
PNKP-204ENST00000594661 HMGN2P46Q86SG4 172 aa14.18□□□□□ -0.14
PNKP-204ENST00000594661 OR4N5Q8IXE1 308 aa14.18□□□□□ -0.14
PNKP-204ENST00000594661 C19orf47Q8N9M1 422 aaKnown RBP14.18□□□□□ -0.14
PNKP-204ENST00000594661 AVL9Q8NBF6 648 aa14.18□□□□□ -0.14
PNKP-204ENST00000594661 OR5T3Q8NGG3 340 aa14.18□□□□□ -0.14
PNKP-204ENST00000594661 KAT2AQ92830 837 aa14.18□□□□□ -0.14
PNKP-204ENST00000594661 MRPL48Q96GC5 212 aaKnown RBP14.18□□□□□ -0.14
PNKP-204ENST00000594661 C16orf58Q96GQ5 468 aa14.18□□□□□ -0.14
PNKP-204ENST00000594661 UBL7Q96S82 380 aaPredicted RBP14.18□□□□□ -0.14
PNKP-204ENST00000594661 SEMA4CQ9C0C4 833 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms