RNA–Protein interactions for RNA: ENST00000594092.5

VRK3-207, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VRK3, Length 1,831 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-207ENST00000594092 NPAS1Q99742 590 aa13.78□□□□□ -0.2
VRK3-207ENST00000594092 SCNM1Q9BWG6 230 aa13.78□□□□□ -0.2
VRK3-207ENST00000594092 TEX12Q9BXU0 123 aa13.78□□□□□ -0.2
VRK3-207ENST00000594092 CCDC90BQ9GZT6 254 aa13.78□□□□□ -0.2
VRK3-207ENST00000594092 DUSP21Q9H596 190 aa13.78□□□□□ -0.2
VRK3-207ENST00000594092 MED17Q9NVC6 651 aa13.78□□□□□ -0.2
VRK3-207ENST00000594092 WASF3Q9UPY6 502 aa13.78□□□□□ -0.2
VRK3-207ENST00000594092 VDAC3Q9Y277 283 aa13.78□□□□□ -0.2
VRK3-207ENST00000594092 CDH10Q9Y6N8 788 aa13.78□□□□□ -0.2
VRK3-207ENST00000594092 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.77□□□□□ -0.21
VRK3-207ENST00000594092 TMED7-TICAM2A0A0A6YYA0 188 aa13.77□□□□□ -0.21
VRK3-207ENST00000594092 SH3D21A4FU49 640 aa13.77□□□□□ -0.21
VRK3-207ENST00000594092 G3V3Y1 287 aa13.77□□□□□ -0.21
VRK3-207ENST00000594092 ETV2O00321 342 aaPredicted RBP13.77□□□□□ -0.21
VRK3-207ENST00000594092 IGF2P01344 180 aa13.77□□□□□ -0.21
VRK3-207ENST00000594092 FXYD6P3P58550 94 aa13.77□□□□□ -0.21
VRK3-207ENST00000594092 OC90Q02509 493 aaPredicted RBP13.77□□□□□ -0.21
VRK3-207ENST00000594092 NEDD8Q15843 81 aa13.77□□□□□ -0.21
VRK3-207ENST00000594092 ADGRG3Q86Y34 549 aa13.77□□□□□ -0.21
VRK3-207ENST00000594092 PLCZ1Q86YW0 608 aa13.77□□□□□ -0.21
VRK3-207ENST00000594092 SPARTQ8N0X7 666 aa13.77□□□□□ -0.21
VRK3-207ENST00000594092 OR4K17Q8NGC6 315 aa13.77□□□□□ -0.21
VRK3-207ENST00000594092 OR8J1Q8NGP2 316 aa13.77□□□□□ -0.21
VRK3-207ENST00000594092 Q96MT0 163 aa13.77□□□□□ -0.21
VRK3-207ENST00000594092 SLC38A2Q96QD8 506 aa13.77□□□□□ -0.21
VRK3-207ENST00000594092 TVP23BQ9NYZ1 205 aa13.77□□□□□ -0.21
VRK3-207ENST00000594092 TMED7Q9Y3B3 224 aa13.77□□□□□ -0.21
VRK3-207ENST00000594092 PCDHGB6Q9Y5F9 930 aa13.77□□□□□ -0.21
VRK3-207ENST00000594092 MPDZO75970 2070 aa13.77□□□□□ -0.21
VRK3-207ENST00000594092 LRRN3E7EW58 273 aa13.76□□□□□ -0.21
VRK3-207ENST00000594092 SNPHO15079 494 aa13.76□□□□□ -0.21
VRK3-207ENST00000594092 RGS10O43665 173 aa13.76□□□□□ -0.21
VRK3-207ENST00000594092 PTP4A3O75365 173 aa13.76□□□□□ -0.21
VRK3-207ENST00000594092 F10P00742 488 aa13.76□□□□□ -0.21
VRK3-207ENST00000594092 P04436 131 aa13.76□□□□□ -0.21
VRK3-207ENST00000594092 HTR1AP08908 422 aa13.76□□□□□ -0.21
VRK3-207ENST00000594092 CD96P40200 585 aa13.76□□□□□ -0.21
VRK3-207ENST00000594092 HTR3AP46098 478 aa13.76□□□□□ -0.21
VRK3-207ENST00000594092 PCYT1AP49585 367 aa13.76□□□□□ -0.21
VRK3-207ENST00000594092 SOX8P57073 446 aa13.76□□□□□ -0.21
VRK3-207ENST00000594092 PIGFQ07326 219 aa13.76□□□□□ -0.21
VRK3-207ENST00000594092 PLPPR5Q32ZL2 321 aa13.76□□□□□ -0.21
VRK3-207ENST00000594092 ACSM5Q6NUN0 579 aa13.76□□□□□ -0.21
VRK3-207ENST00000594092 RPL13AP3Q6NVV1 102 aa13.76□□□□□ -0.21
VRK3-207ENST00000594092 AHSA2Q719I0 299 aa13.76□□□□□ -0.21
VRK3-207ENST00000594092 SLC46A3Q7Z3Q1 461 aa13.76□□□□□ -0.21
VRK3-207ENST00000594092 GPR141Q7Z602 305 aa13.76□□□□□ -0.21
VRK3-207ENST00000594092 PSD4Q8NDX1 1056 aa13.76□□□□□ -0.21
VRK3-207ENST00000594092 FANK1Q8TC84 345 aa13.76□□□□□ -0.21
VRK3-207ENST00000594092 SAMD8Q96LT4 415 aa13.76□□□□□ -0.21
VRK3-207ENST00000594092 IL4I1Q96RQ9 567 aa13.76□□□□□ -0.21
VRK3-207ENST00000594092 TSSK6Q9BXA6 273 aa13.76□□□□□ -0.21
VRK3-207ENST00000594092 POLDIP3Q9BY77 421 aaKnown RBP13.76□□□□□ -0.21
VRK3-207ENST00000594092 OR52D1Q9H346 318 aa13.76□□□□□ -0.21
VRK3-207ENST00000594092 SACM1LQ9NTJ5 587 aa13.76□□□□□ -0.21
VRK3-207ENST00000594092 ABI3Q9P2A4 366 aa13.76□□□□□ -0.21
VRK3-207ENST00000594092 ERVK-18Q9QC07 812 aa13.76□□□□□ -0.21
VRK3-207ENST00000594092 SIGLEC7Q9Y286 467 aa13.76□□□□□ -0.21
VRK3-207ENST00000594092 CPAMD8Q8IZJ3 1885 aa13.76□□□□□ -0.21
VRK3-207ENST00000594092 CNTRLQ7Z7A1 2325 aa13.76□□□□□ -0.21
VRK3-207ENST00000594092 TRAV27A0A087WT01 109 aa13.76□□□□□ -0.21
VRK3-207ENST00000594092 TMEM72A0PK05 275 aa13.76□□□□□ -0.21
VRK3-207ENST00000594092 HTR3EA5X5Y0 456 aa13.76□□□□□ -0.21
VRK3-207ENST00000594092 ZNF891A8MT65 544 aaPredicted RBP13.76□□□□□ -0.21
VRK3-207ENST00000594092 SUSD5O60279 629 aa13.76□□□□□ -0.21
VRK3-207ENST00000594092 OR7A10O76100 309 aa13.76□□□□□ -0.21
VRK3-207ENST00000594092 CH25HO95992 272 aa13.76□□□□□ -0.21
VRK3-207ENST00000594092 JUNBP17275 347 aaPredicted RBP13.76□□□□□ -0.21
VRK3-207ENST00000594092 ZNF41P51814 821 aaPredicted RBP13.76□□□□□ -0.21
VRK3-207ENST00000594092 FOXF1Q12946 379 aa13.76□□□□□ -0.21
VRK3-207ENST00000594092 FHL1Q13642 323 aa13.76□□□□□ -0.21
VRK3-207ENST00000594092 TUBA3CQ13748 450 aa13.76□□□□□ -0.21
VRK3-207ENST00000594092 CRTC2Q53ET0 693 aaPredicted RBP13.76□□□□□ -0.21
VRK3-207ENST00000594092 SLC25A53Q5H9E4 307 aa13.76□□□□□ -0.21
VRK3-207ENST00000594092 CLEC12AQ5QGZ9 265 aa13.76□□□□□ -0.21
VRK3-207ENST00000594092 TUBA3EQ6PEY2 450 aa13.76□□□□□ -0.21
VRK3-207ENST00000594092 LINC00696Q6ZRV3 163 aa13.76□□□□□ -0.21
VRK3-207ENST00000594092 OAFQ86UD1 273 aa13.76□□□□□ -0.21
VRK3-207ENST00000594092 TCEANCQ8N8B7 351 aa13.76□□□□□ -0.21
VRK3-207ENST00000594092 OR52L1Q8NGH7 329 aa13.76□□□□□ -0.21
VRK3-207ENST00000594092 FGF11Q92914 225 aa13.76□□□□□ -0.21
VRK3-207ENST00000594092 MYDGFQ969H8 173 aa13.76□□□□□ -0.21
VRK3-207ENST00000594092 C1GALT1C1Q96EU7 318 aa13.76□□□□□ -0.21
VRK3-207ENST00000594092 TMEM41AQ96HV5 264 aa13.76□□□□□ -0.21
VRK3-207ENST00000594092 PTGES2Q9H7Z7 377 aa13.76□□□□□ -0.21
VRK3-207ENST00000594092 LRFN1Q9P244 771 aa13.76□□□□□ -0.21
VRK3-207ENST00000594092 IL20RAQ9UHF4 553 aa13.76□□□□□ -0.21
VRK3-207ENST00000594092 PSORS1C1Q9UIG5 152 aa13.76□□□□□ -0.21
VRK3-207ENST00000594092 A0A0G2JMM0 328 aa13.75□□□□□ -0.21
VRK3-207ENST00000594092 A0A1W2PPB8 328 aa13.75□□□□□ -0.21
VRK3-207ENST00000594092 A0A1W2PRS3 328 aa13.75□□□□□ -0.21
VRK3-207ENST00000594092 CCDC160A6NGH7 325 aa13.75□□□□□ -0.21
VRK3-207ENST00000594092 A6NL46 340 aa13.75□□□□□ -0.21
VRK3-207ENST00000594092 CLCA1A8K7I4 914 aa13.75□□□□□ -0.21
VRK3-207ENST00000594092 KIR3DP1A8MWS1 328 aa13.75□□□□□ -0.21
VRK3-207ENST00000594092 TRIM3O75382 744 aaPredicted RBP13.75□□□□□ -0.21
VRK3-207ENST00000594092 RCBTB2O95199 551 aa13.75□□□□□ -0.21
VRK3-207ENST00000594092 SNX4O95219 450 aa13.75□□□□□ -0.21
VRK3-207ENST00000594092 WDPCPO95876 746 aa13.75□□□□□ -0.21
VRK3-207ENST00000594092 BMP7P18075 431 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms