RNA–Protein interactions for RNA: ENST00000593977.1

LINC00649-204, long intergenic non-protein coding RNA 649, humanhuman

TSL 5 BASIC

Gene LINC00649, Length 640 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-204ENST00000593977 SFT2D3Q587I9 215 aa3.72□□□□□ -1.81
LINC00649-204ENST00000593977 FAM69BQ5VUD6 431 aa3.72□□□□□ -1.81
LINC00649-204ENST00000593977 TWF2Q6IBS0 349 aaKnown RBP3.72□□□□□ -1.81
LINC00649-204ENST00000593977 RTL6Q6ICC9 239 aa3.72□□□□□ -1.81
LINC00649-204ENST00000593977 SLC8B1Q6J4K2 584 aa3.72□□□□□ -1.81
LINC00649-204ENST00000593977 FAM71F2Q6NXP2 309 aa3.72□□□□□ -1.81
LINC00649-204ENST00000593977 ASCL4Q6XD76 172 aa3.72□□□□□ -1.81
LINC00649-204ENST00000593977 SHFQ7M4L6 423 aa3.72□□□□□ -1.81
LINC00649-204ENST00000593977 RD3Q7Z3Z2 195 aa3.72□□□□□ -1.81
LINC00649-204ENST00000593977 C5orf24Q7Z6I8 188 aa3.72□□□□□ -1.81
LINC00649-204ENST00000593977 KCNMB4Q86W47 210 aa3.72□□□□□ -1.81
LINC00649-204ENST00000593977 CDKL3Q8IVW4 592 aaPredicted RBP3.72□□□□□ -1.81
LINC00649-204ENST00000593977 LRRC34Q8IZ02 419 aa3.72□□□□□ -1.81
LINC00649-204ENST00000593977 TMEM99Q8N816 258 aa3.72□□□□□ -1.81
LINC00649-204ENST00000593977 TEX45Q8NA69 505 aa3.72□□□□□ -1.81
LINC00649-204ENST00000593977 MFSD9Q8NBP5 474 aa3.72□□□□□ -1.81
LINC00649-204ENST00000593977 RNF149Q8NC42 400 aa3.72□□□□□ -1.81
LINC00649-204ENST00000593977 NOA1Q8NC60 698 aaKnown RBP3.72□□□□□ -1.81
LINC00649-204ENST00000593977 NFAM1Q8NET5 270 aaPredicted RBP3.72□□□□□ -1.81
LINC00649-204ENST00000593977 OR7G2Q8NG99 324 aa3.72□□□□□ -1.81
LINC00649-204ENST00000593977 OR10H4Q8NGA5 316 aa3.72□□□□□ -1.81
LINC00649-204ENST00000593977 OR1L6Q8NGR2 347 aa3.72□□□□□ -1.81
LINC00649-204ENST00000593977 OR5R1Q8NH85 324 aa3.72□□□□□ -1.81
LINC00649-204ENST00000593977 OR14A16Q8NHC5 309 aa3.72□□□□□ -1.81
LINC00649-204ENST00000593977 ZNF461Q8TAF7 563 aa3.72□□□□□ -1.81
LINC00649-204ENST00000593977 PPP4R1Q8TF05 950 aa3.72□□□□□ -1.81
LINC00649-204ENST00000593977 CCDC107Q8WV48 283 aa3.72□□□□□ -1.81
LINC00649-204ENST00000593977 KIFAP3Q92845 792 aa3.72□□□□□ -1.81
LINC00649-204ENST00000593977 PDLIM2Q96JY6 352 aa3.72□□□□□ -1.81
LINC00649-204ENST00000593977 CMKLR1Q99788 373 aa3.72□□□□□ -1.81
LINC00649-204ENST00000593977 P2RY13Q9BPV8 354 aa3.72□□□□□ -1.81
LINC00649-204ENST00000593977 MLST8Q9BVC4 326 aa3.72□□□□□ -1.81
LINC00649-204ENST00000593977 C1QTNF7Q9BXJ2 289 aa3.72□□□□□ -1.81
LINC00649-204ENST00000593977 ERVK-6Q9BXR3 956 aa3.72□□□□□ -1.81
LINC00649-204ENST00000593977 PARD6BQ9BYG5 372 aa3.72□□□□□ -1.81
LINC00649-204ENST00000593977 SHCBP1LQ9BZQ2 653 aa3.72□□□□□ -1.81
LINC00649-204ENST00000593977 TM6SF2Q9BZW4 377 aa3.72□□□□□ -1.81
LINC00649-204ENST00000593977 DCLK3Q9C098 648 aa3.72□□□□□ -1.81
LINC00649-204ENST00000593977 VN1R1Q9GZP7 353 aa3.72□□□□□ -1.81
LINC00649-204ENST00000593977 SDCBP2Q9H190 292 aa3.72□□□□□ -1.81
LINC00649-204ENST00000593977 OPN3Q9H1Y3 402 aaPredicted RBP3.72□□□□□ -1.81
LINC00649-204ENST00000593977 LRRN3Q9H3W5 708 aa3.72□□□□□ -1.81
LINC00649-204ENST00000593977 CCNB1IP1Q9NPC3 277 aa3.72□□□□□ -1.81
LINC00649-204ENST00000593977 SPAG4Q9NPE6 437 aa3.72□□□□□ -1.81
LINC00649-204ENST00000593977 C1orf123Q9NWV4 160 aa3.72□□□□□ -1.81
LINC00649-204ENST00000593977 SYBUQ9NX95 663 aa3.72□□□□□ -1.81
LINC00649-204ENST00000593977 CLEC5AQ9NY25 188 aa3.72□□□□□ -1.81
LINC00649-204ENST00000593977 PSMC3IPQ9P2W1 217 aaPredicted RBP3.72□□□□□ -1.81
LINC00649-204ENST00000593977 GNG12Q9UBI6 72 aa3.72□□□□□ -1.81
LINC00649-204ENST00000593977 ATPIF1Q9UII2 106 aa3.72□□□□□ -1.81
LINC00649-204ENST00000593977 DAPK2Q9UIK4 370 aa3.72□□□□□ -1.81
LINC00649-204ENST00000593977 PHF11Q9UIL8 331 aa3.72□□□□□ -1.81
LINC00649-204ENST00000593977 SIX4Q9UIU6 781 aa3.72□□□□□ -1.81
LINC00649-204ENST00000593977 ZNF229Q9UJW7 825 aa3.72□□□□□ -1.81
LINC00649-204ENST00000593977 MMP17Q9ULZ9 603 aa3.72□□□□□ -1.81
LINC00649-204ENST00000593977 PCDHGB1Q9Y5G3 927 aa3.72□□□□□ -1.81
LINC00649-204ENST00000593977 VPS13CQ709C8 3753 aa3.71□□□□□ -1.82
LINC00649-204ENST00000593977 CUBNO60494 3623 aa3.71□□□□□ -1.82
LINC00649-204ENST00000593977 PKDREJQ9NTG1 2253 aa3.71□□□□□ -1.82
LINC00649-204ENST00000593977 IGHV1OR15-9A0A0B4J2B8 117 aa3.71□□□□□ -1.82
LINC00649-204ENST00000593977 C1orf232A0A0U1RR37 186 aa3.71□□□□□ -1.82
LINC00649-204ENST00000593977 A0A1W2PPE3 182 aa3.71□□□□□ -1.82
LINC00649-204ENST00000593977 RAB19A4D1S5 217 aa3.71□□□□□ -1.82
LINC00649-204ENST00000593977 SRRM4A7MD48 611 aaKnown RBP3.71□□□□□ -1.82
LINC00649-204ENST00000593977 ZNF732B4DXR9 585 aa3.71□□□□□ -1.82
LINC00649-204ENST00000593977 H3BMH7 237 aa3.71□□□□□ -1.82
LINC00649-204ENST00000593977 GOLGA8RI6L899 631 aa3.71□□□□□ -1.82
LINC00649-204ENST00000593977 K7ESM1 405 aa3.71□□□□□ -1.82
LINC00649-204ENST00000593977 ARPC2O15144 300 aa3.71□□□□□ -1.82
LINC00649-204ENST00000593977 ZIC3O60481 467 aa3.71□□□□□ -1.82
LINC00649-204ENST00000593977 SH3BGRLO75368 114 aa3.71□□□□□ -1.82
LINC00649-204ENST00000593977 STK17BO94768 372 aa3.71□□□□□ -1.82
LINC00649-204ENST00000593977 GAPDHP04406 335 aaKnown RBP3.71□□□□□ -1.82
LINC00649-204ENST00000593977 SERPINE2P07093 398 aa3.71□□□□□ -1.82
LINC00649-204ENST00000593977 KRT7P08729 469 aa3.71□□□□□ -1.82
LINC00649-204ENST00000593977 UQCRBP14927 111 aa3.71□□□□□ -1.82
LINC00649-204ENST00000593977 ACADSP16219 412 aa3.71□□□□□ -1.82
LINC00649-204ENST00000593977 ZNF23P17027 643 aa3.71□□□□□ -1.82
LINC00649-204ENST00000593977 CD40LGP29965 261 aa3.71□□□□□ -1.82
LINC00649-204ENST00000593977 YWHABP31946 246 aaKnown RBP3.71□□□□□ -1.82
LINC00649-204ENST00000593977 SFTPDP35247 375 aa3.71□□□□□ -1.82
LINC00649-204ENST00000593977 KCNJ3P48549 501 aa3.71□□□□□ -1.82
LINC00649-204ENST00000593977 CDH12P55289 794 aa3.71□□□□□ -1.82
LINC00649-204ENST00000593977 DSTNP60981 165 aa3.71□□□□□ -1.82
LINC00649-204ENST00000593977 TSPAN5P62079 268 aa3.71□□□□□ -1.82
LINC00649-204ENST00000593977 ERVK-8P63133 956 aa3.71□□□□□ -1.82
LINC00649-204ENST00000593977 DR1Q01658 176 aa3.71□□□□□ -1.82
LINC00649-204ENST00000593977 TRAP1Q12931 704 aaKnown RBP3.71□□□□□ -1.82
LINC00649-204ENST00000593977 PMS2P3Q13401 168 aa3.71□□□□□ -1.82
LINC00649-204ENST00000593977 TUBA3CQ13748 450 aa3.71□□□□□ -1.82
LINC00649-204ENST00000593977 RUNX3Q13761 415 aa3.71□□□□□ -1.82
LINC00649-204ENST00000593977 CRMP1Q14194 572 aa3.71□□□□□ -1.82
LINC00649-204ENST00000593977 FASTKD3Q14CZ7 662 aaKnown RBP3.71□□□□□ -1.82
LINC00649-204ENST00000593977 TEAD2Q15562 447 aa3.71□□□□□ -1.82
LINC00649-204ENST00000593977 PSMD5Q16401 504 aa3.71□□□□□ -1.82
LINC00649-204ENST00000593977 ZNF699Q32M78 642 aa3.71□□□□□ -1.82
LINC00649-204ENST00000593977 CCDC14Q49A88 953 aa3.71□□□□□ -1.82
LINC00649-204ENST00000593977 ACSF3Q4G176 576 aaPredicted RBP3.71□□□□□ -1.82
LINC00649-204ENST00000593977 EOGTQ5NDL2 527 aa3.71□□□□□ -1.82
LINC00649-204ENST00000593977 LGSNQ5TDP6 509 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms