RNA–Protein interactions for RNA: ENST00000593829.5

LSM4-203, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM4, Length 1,908 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-203ENST00000593829 V9GYQ6 96 aa17.78■□□□□ 0.44
LSM4-203ENST00000593829 LOC100130705A0A1B0GUX0 176 aa17.77■□□□□ 0.44
LSM4-203ENST00000593829 EVPLLA8MZ36 301 aa17.77■□□□□ 0.44
LSM4-203ENST00000593829 SEMA7AO75326 666 aa17.77■□□□□ 0.44
LSM4-203ENST00000593829 CHRM4P08173 479 aa17.77■□□□□ 0.44
LSM4-203ENST00000593829 TPD52P55327 224 aaPredicted RBP17.77■□□□□ 0.44
LSM4-203ENST00000593829 CHRNEQ04844 493 aa17.77■□□□□ 0.44
LSM4-203ENST00000593829 ZNF630Q2M218 657 aaPredicted RBP17.77■□□□□ 0.44
LSM4-203ENST00000593829 RUNDC3AQ59EK9 446 aa17.77■□□□□ 0.44
LSM4-203ENST00000593829 CD163Q86VB7 1156 aa17.77■□□□□ 0.44
LSM4-203ENST00000593829 DOLPP1Q86YN1 238 aa17.77■□□□□ 0.44
LSM4-203ENST00000593829 SCAIQ8N9R8 606 aa17.77■□□□□ 0.44
LSM4-203ENST00000593829 OR2T12Q8NG77 320 aa17.77■□□□□ 0.44
LSM4-203ENST00000593829 C1GALT1C1Q96EU7 318 aa17.77■□□□□ 0.44
LSM4-203ENST00000593829 SH3GL1Q99961 368 aa17.77■□□□□ 0.44
LSM4-203ENST00000593829 CALML5Q9NZT1 146 aa17.77■□□□□ 0.44
LSM4-203ENST00000593829 HSPE1-MOB4S4R3N1 261 aa17.77■□□□□ 0.44
LSM4-203ENST00000593829 ZNF407Q9C0G0 2248 aa17.77■□□□□ 0.44
LSM4-203ENST00000593829 CLEC18AA5D8T8 446 aa17.76■□□□□ 0.43
LSM4-203ENST00000593829 SERINC4A6NH21 518 aa17.76■□□□□ 0.43
LSM4-203ENST00000593829 GTPBP1O00178 669 aaKnown RBP17.76■□□□□ 0.43
LSM4-203ENST00000593829 HCRTR2O43614 444 aa17.76■□□□□ 0.43
LSM4-203ENST00000593829 ZIC3O60481 467 aa17.76■□□□□ 0.43
LSM4-203ENST00000593829 CST1P01037 141 aa17.76■□□□□ 0.43
LSM4-203ENST00000593829 RNF144AP50876 292 aaPredicted RBP17.76■□□□□ 0.43
LSM4-203ENST00000593829 MTPNP58546 118 aa17.76■□□□□ 0.43
LSM4-203ENST00000593829 GNA13Q14344 377 aa17.76■□□□□ 0.43
LSM4-203ENST00000593829 GXYLT1Q4G148 440 aa17.76■□□□□ 0.43
LSM4-203ENST00000593829 CLEC18BQ6UXF7 455 aa17.76■□□□□ 0.43
LSM4-203ENST00000593829 FJX1Q86VR8 437 aa17.76■□□□□ 0.43
LSM4-203ENST00000593829 CLEC18CQ8NCF0 446 aa17.76■□□□□ 0.43
LSM4-203ENST00000593829 PHF10Q8WUB8 498 aaKnown RBP17.76■□□□□ 0.43
LSM4-203ENST00000593829 SLC38A5Q8WUX1 472 aa17.76■□□□□ 0.43
LSM4-203ENST00000593829 SGCDQ92629 289 aa17.76■□□□□ 0.43
LSM4-203ENST00000593829 PMM1Q92871 262 aa17.76■□□□□ 0.43
LSM4-203ENST00000593829 SLC47A1Q96FL8 570 aa17.76■□□□□ 0.43
LSM4-203ENST00000593829 SLC38A1Q9H2H9 487 aa17.76■□□□□ 0.43
LSM4-203ENST00000593829 MTHFD2LQ9H903 347 aaPredicted RBP17.76■□□□□ 0.43
LSM4-203ENST00000593829 SMURF2Q9HAU4 748 aa17.76■□□□□ 0.43
LSM4-203ENST00000593829 MAGED1Q9Y5V3 778 aaPredicted RBP17.76■□□□□ 0.43
LSM4-203ENST00000593829 FLNCQ14315 2725 aa17.76■□□□□ 0.43
LSM4-203ENST00000593829 GMFGO60234 142 aa17.76■□□□□ 0.43
LSM4-203ENST00000593829 TNFRSF21O75509 655 aa17.76■□□□□ 0.43
LSM4-203ENST00000593829 AGFG2O95081 481 aa17.76■□□□□ 0.43
LSM4-203ENST00000593829 HK1P19367 917 aa17.76■□□□□ 0.43
LSM4-203ENST00000593829 SERPINB10P48595 397 aa17.76■□□□□ 0.43
LSM4-203ENST00000593829 CRISP3P54108 245 aa17.76■□□□□ 0.43
LSM4-203ENST00000593829 RAD23AP54725 363 aa17.76■□□□□ 0.43
LSM4-203ENST00000593829 CXCR4P61073 352 aa17.76■□□□□ 0.43
LSM4-203ENST00000593829 ZNF117Q03924 483 aa17.76■□□□□ 0.43
LSM4-203ENST00000593829 SRSF1Q07955 248 aaKnown RBP eCLIP17.76■□□□□ 0.43
LSM4-203ENST00000593829 MAPK11Q15759 364 aa17.76■□□□□ 0.43
LSM4-203ENST00000593829 MAPK14Q16539 360 aa17.76■□□□□ 0.43
LSM4-203ENST00000593829 VASNQ6EMK4 673 aa17.76■□□□□ 0.43
LSM4-203ENST00000593829 EID3Q8N140 333 aa17.76■□□□□ 0.43
LSM4-203ENST00000593829 MFSD4AQ8N468 514 aa17.76■□□□□ 0.43
LSM4-203ENST00000593829 ZG16BQ96DA0 208 aa17.76■□□□□ 0.43
LSM4-203ENST00000593829 CPPED1Q9BRF8 314 aaPredicted RBP17.76■□□□□ 0.43
LSM4-203ENST00000593829 ERRFI1Q9UJM3 462 aaPredicted RBP17.76■□□□□ 0.43
LSM4-203ENST00000593829 GPC6Q9Y625 555 aaPredicted RBP17.76■□□□□ 0.43
LSM4-203ENST00000593829 CENPVL1A0A0U1RR11 272 aa17.75■□□□□ 0.43
LSM4-203ENST00000593829 CCL21O00585 134 aa17.75■□□□□ 0.43
LSM4-203ENST00000593829 ACTL6AO96019 429 aa17.75■□□□□ 0.43
LSM4-203ENST00000593829 BCHEP06276 602 aa17.75■□□□□ 0.43
LSM4-203ENST00000593829 NUDT7P0C024 238 aa17.75■□□□□ 0.43
LSM4-203ENST00000593829 BMP7P18075 431 aa17.75■□□□□ 0.43
LSM4-203ENST00000593829 GPX2P18283 190 aa17.75■□□□□ 0.43
LSM4-203ENST00000593829 ADH7P40394 386 aa17.75■□□□□ 0.43
LSM4-203ENST00000593829 EIF2B2P49770 351 aaKnown RBP17.75■□□□□ 0.43
LSM4-203ENST00000593829 CRYZQ08257 329 aaKnown RBP17.75■□□□□ 0.43
LSM4-203ENST00000593829 DGUOKQ16854 277 aa17.75■□□□□ 0.43
LSM4-203ENST00000593829 EMC4Q5J8M3 183 aa17.75■□□□□ 0.43
LSM4-203ENST00000593829 PRSS48Q7RTY5 328 aa17.75■□□□□ 0.43
LSM4-203ENST00000593829 HIPK1Q86Z02 1210 aa17.75■□□□□ 0.43
LSM4-203ENST00000593829 OR5M9Q8NGP3 310 aa17.75■□□□□ 0.43
LSM4-203ENST00000593829 YIPF6Q96EC8 236 aa17.75■□□□□ 0.43
LSM4-203ENST00000593829 REXO5Q96IC2 774 aaKnown RBP17.75■□□□□ 0.43
LSM4-203ENST00000593829 TIMP4Q99727 224 aa17.75■□□□□ 0.43
LSM4-203ENST00000593829 TP63Q9H3D4 680 aaPredicted RBP17.75■□□□□ 0.43
LSM4-203ENST00000593829 IKZF5Q9H5V7 419 aa17.75■□□□□ 0.43
LSM4-203ENST00000593829 PIF1Q9H611 641 aa17.75■□□□□ 0.43
LSM4-203ENST00000593829 RUBCNLQ9H714 662 aa17.75■□□□□ 0.43
LSM4-203ENST00000593829 A4GALTQ9NPC4 353 aa17.75■□□□□ 0.43
LSM4-203ENST00000593829 CARD8Q9Y2G2 431 aa17.75■□□□□ 0.43
LSM4-203ENST00000593829 RPH3AQ9Y2J0 694 aaPredicted RBP17.75■□□□□ 0.43
LSM4-203ENST00000593829 GSTA4O15217 222 aa17.74■□□□□ 0.43
LSM4-203ENST00000593829 UBL4AP11441 157 aa17.74■□□□□ 0.43
LSM4-203ENST00000593829 TCEA1P23193 301 aaKnown RBP17.74■□□□□ 0.43
LSM4-203ENST00000593829 PER3P56645 1201 aa17.74■□□□□ 0.43
LSM4-203ENST00000593829 GLYR1Q49A26 553 aaPredicted RBP17.74■□□□□ 0.43
LSM4-203ENST00000593829 CCDC92Q53HC0 331 aaPredicted RBP17.74■□□□□ 0.43
LSM4-203ENST00000593829 EIF3MQ7L2H7 374 aaKnown RBP17.74■□□□□ 0.43
LSM4-203ENST00000593829 SETD9Q8NE22 299 aa17.74■□□□□ 0.43
LSM4-203ENST00000593829 SFXN2Q96NB2 322 aa17.74■□□□□ 0.43
LSM4-203ENST00000593829 THUMPD3Q9BV44 507 aaKnown RBP17.74■□□□□ 0.43
LSM4-203ENST00000593829 QRSL1Q9H0R6 528 aaKnown RBP17.74■□□□□ 0.43
LSM4-203ENST00000593829 GABARAPL1Q9H0R8 117 aa17.74■□□□□ 0.43
LSM4-203ENST00000593829 GTF3C1Q12789 2109 aa17.74■□□□□ 0.43
LSM4-203ENST00000593829 DNAJC13O75165 2243 aa17.74■□□□□ 0.43
LSM4-203ENST00000593829 A0A087WZY1 265 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms