RNA–Protein interactions for RNA: ENST00000591519.1

VPS4B-207, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 2 BASIC

Gene VPS4B, Length 551 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-207ENST00000591519 CD8AP01732 235 aa9.19□□□□□ -0.94
VPS4B-207ENST00000591519 IDO1P14902 403 aa9.19□□□□□ -0.94
VPS4B-207ENST00000591519 PGCP20142 388 aa9.19□□□□□ -0.94
VPS4B-207ENST00000591519 COX5AP20674 150 aa9.19□□□□□ -0.94
VPS4B-207ENST00000591519 IGHV1-2P23083 117 aa9.19□□□□□ -0.94
VPS4B-207ENST00000591519 PGM1P36871 562 aa9.19□□□□□ -0.94
VPS4B-207ENST00000591519 APOBEC1P41238 236 aaKnown RBP9.19□□□□□ -0.94
VPS4B-207ENST00000591519 CLK1P49759 484 aaKnown RBP9.19□□□□□ -0.94
VPS4B-207ENST00000591519 DIO1P49895 249 aa9.19□□□□□ -0.94
VPS4B-207ENST00000591519 CSNK2A1P68400 391 aaPredicted RBP9.19□□□□□ -0.94
VPS4B-207ENST00000591519 GUCY1A3Q02108 690 aa9.19□□□□□ -0.94
VPS4B-207ENST00000591519 BSPH1Q075Z2 132 aa9.19□□□□□ -0.94
VPS4B-207ENST00000591519 DOC2BQ14184 412 aa9.19□□□□□ -0.94
VPS4B-207ENST00000591519 GPR68Q15743 365 aa9.19□□□□□ -0.94
VPS4B-207ENST00000591519 MAPK14Q16539 360 aa9.19□□□□□ -0.94
VPS4B-207ENST00000591519 PDCD4Q53EL6 469 aaKnown RBP9.19□□□□□ -0.94
VPS4B-207ENST00000591519 EIF3MQ7L2H7 374 aaKnown RBP9.19□□□□□ -0.94
VPS4B-207ENST00000591519 ATG4DQ86TL0 474 aaPredicted RBP9.19□□□□□ -0.94
VPS4B-207ENST00000591519 MTDHQ86UE4 582 aaKnown RBP9.19□□□□□ -0.94
VPS4B-207ENST00000591519 DTX2Q86UW9 622 aa9.19□□□□□ -0.94
VPS4B-207ENST00000591519 LRRC34Q8IZ02 419 aa9.19□□□□□ -0.94
VPS4B-207ENST00000591519 ARFGAP2Q8N6H7 521 aa9.19□□□□□ -0.94
VPS4B-207ENST00000591519 ZNF614Q8N883 585 aa9.19□□□□□ -0.94
VPS4B-207ENST00000591519 FAM71CQ8NEG0 241 aa9.19□□□□□ -0.94
VPS4B-207ENST00000591519 SLC25A43Q8WUT9 341 aaPredicted RBP9.19□□□□□ -0.94
VPS4B-207ENST00000591519 TESCQ96BS2 214 aa9.19□□□□□ -0.94
VPS4B-207ENST00000591519 MUCL1Q96DR8 90 aa9.19□□□□□ -0.94
VPS4B-207ENST00000591519 RADILQ96JH8 1075 aa9.19□□□□□ -0.94
VPS4B-207ENST00000591519 OR5B2Q96R09 309 aa9.19□□□□□ -0.94
VPS4B-207ENST00000591519 OR52E6Q96RD3 313 aa9.19□□□□□ -0.94
VPS4B-207ENST00000591519 ZNF300Q96RE9 604 aaPredicted RBP9.19□□□□□ -0.94
VPS4B-207ENST00000591519 INPP5KQ9BT40 448 aa9.19□□□□□ -0.94
VPS4B-207ENST00000591519 CCDC106Q9BWC9 280 aa9.19□□□□□ -0.94
VPS4B-207ENST00000591519 EXD2Q9NVH0 621 aa9.19□□□□□ -0.94
VPS4B-207ENST00000591519 PRSS50Q9UI38 385 aa9.19□□□□□ -0.94
VPS4B-207ENST00000591519 ADAM21Q9UKJ8 722 aa9.19□□□□□ -0.94
VPS4B-207ENST00000591519 MKLN1Q9UL63 735 aa9.19□□□□□ -0.94
VPS4B-207ENST00000591519 LIPT1Q9Y234 373 aa9.19□□□□□ -0.94
VPS4B-207ENST00000591519 SLC35A3Q9Y2D2 325 aa9.19□□□□□ -0.94
VPS4B-207ENST00000591519 CENPVL1A0A0U1RR11 272 aa9.18□□□□□ -0.94
VPS4B-207ENST00000591519 SHISA9B4DS77 424 aa9.18□□□□□ -0.94
VPS4B-207ENST00000591519 SULT2B1O00204 365 aa9.18□□□□□ -0.94
VPS4B-207ENST00000591519 NR5A2O00482 541 aa9.18□□□□□ -0.94
VPS4B-207ENST00000591519 CLOCKO15516 846 aa9.18□□□□□ -0.94
VPS4B-207ENST00000591519 KIAA0513O60268 411 aa9.18□□□□□ -0.94
VPS4B-207ENST00000591519 EDF1O60869 148 aaKnown RBP9.18□□□□□ -0.94
VPS4B-207ENST00000591519 TGDSO95455 350 aa9.18□□□□□ -0.94
VPS4B-207ENST00000591519 ABCA1O95477 2261 aa9.18□□□□□ -0.94
VPS4B-207ENST00000591519 C1QCP02747 245 aa9.18□□□□□ -0.94
VPS4B-207ENST00000591519 GSNP06396 782 aa9.18□□□□□ -0.94
VPS4B-207ENST00000591519 PGRP06401 933 aa9.18□□□□□ -0.94
VPS4B-207ENST00000591519 VIMP08670 466 aaKnown RBP9.18□□□□□ -0.94
VPS4B-207ENST00000591519 UBTFL6P0CB48 400 aaPredicted RBP9.18□□□□□ -0.94
VPS4B-207ENST00000591519 UQCRC2P22695 453 aa9.18□□□□□ -0.94
VPS4B-207ENST00000591519 EDNRAP25101 427 aa9.18□□□□□ -0.94
VPS4B-207ENST00000591519 CHI3L1P36222 383 aaPredicted RBP9.18□□□□□ -0.94
VPS4B-207ENST00000591519 CDKN2CP42773 168 aa9.18□□□□□ -0.94
VPS4B-207ENST00000591519 STX1BP61266 288 aa9.18□□□□□ -0.94
VPS4B-207ENST00000591519 MERTKQ12866 999 aa9.18□□□□□ -0.94
VPS4B-207ENST00000591519 PPA1Q15181 289 aa9.18□□□□□ -0.94
VPS4B-207ENST00000591519 GSTA3Q16772 222 aa9.18□□□□□ -0.94
VPS4B-207ENST00000591519 SYT14P1Q58G82 188 aa9.18□□□□□ -0.94
VPS4B-207ENST00000591519 ANXA8L1Q5VT79 327 aa9.18□□□□□ -0.94
VPS4B-207ENST00000591519 FBXW9Q5XUX1 488 aa9.18□□□□□ -0.94
VPS4B-207ENST00000591519 TYW3Q6IPR3 259 aaKnown RBP9.18□□□□□ -0.94
VPS4B-207ENST00000591519 ALKBH2Q6NS38 261 aa9.18□□□□□ -0.94
VPS4B-207ENST00000591519 OLIG3Q7RTU3 272 aa9.18□□□□□ -0.94
VPS4B-207ENST00000591519 GALNT5Q7Z7M9 940 aa9.18□□□□□ -0.94
VPS4B-207ENST00000591519 MIER2Q8N344 545 aa9.18□□□□□ -0.94
VPS4B-207ENST00000591519 TMCO5AQ8N6Q1 288 aa9.18□□□□□ -0.94
VPS4B-207ENST00000591519 ZNF433Q8N7K0 673 aaPredicted RBP9.18□□□□□ -0.94
VPS4B-207ENST00000591519 VPS37AQ8NEZ2 397 aa9.18□□□□□ -0.94
VPS4B-207ENST00000591519 NEUROG1Q92886 237 aa9.18□□□□□ -0.94
VPS4B-207ENST00000591519 ZG16BQ96DA0 208 aa9.18□□□□□ -0.94
VPS4B-207ENST00000591519 SLC35G5Q96KT7 338 aa9.18□□□□□ -0.94
VPS4B-207ENST00000591519 SLC35A5Q9BS91 424 aa9.18□□□□□ -0.94
VPS4B-207ENST00000591519 TRAF4Q9BUZ4 470 aaPredicted RBP9.18□□□□□ -0.94
VPS4B-207ENST00000591519 REG4Q9BYZ8 158 aa9.18□□□□□ -0.94
VPS4B-207ENST00000591519 QRSL1Q9H0R6 528 aaKnown RBP9.18□□□□□ -0.94
VPS4B-207ENST00000591519 SLCO5A1Q9H2Y9 848 aa9.18□□□□□ -0.94
VPS4B-207ENST00000591519 OR51I1Q9H343 314 aa9.18□□□□□ -0.94
VPS4B-207ENST00000591519 MED4Q9NPJ6 270 aa9.18□□□□□ -0.94
VPS4B-207ENST00000591519 FGFR1OP2Q9NVK5 253 aa9.18□□□□□ -0.94
VPS4B-207ENST00000591519 CISD1Q9NZ45 108 aaKnown RBP9.18□□□□□ -0.94
VPS4B-207ENST00000591519 PRDM4Q9UKN5 801 aa9.18□□□□□ -0.94
VPS4B-207ENST00000591519 TRAPPC4Q9Y296 219 aa9.18□□□□□ -0.94
VPS4B-207ENST00000591519 HDGFL3Q9Y3E1 203 aa9.18□□□□□ -0.94
VPS4B-207ENST00000591519 WDR45Q9Y484 360 aa9.18□□□□□ -0.94
VPS4B-207ENST00000591519 MAGED1Q9Y5V3 778 aaPredicted RBP9.18□□□□□ -0.94
VPS4B-207ENST00000591519 DNHD1Q96M86 4753 aa9.17□□□□□ -0.94
VPS4B-207ENST00000591519 A0A0G2JND7 137 aa9.17□□□□□ -0.94
VPS4B-207ENST00000591519 A0A1W2PP18 115 aa9.17□□□□□ -0.94
VPS4B-207ENST00000591519 A6NJY4 79 aa9.17□□□□□ -0.94
VPS4B-207ENST00000591519 OR5H1A6NKK0 313 aa9.17□□□□□ -0.94
VPS4B-207ENST00000591519 ZNF716A6NP11 495 aa9.17□□□□□ -0.94
VPS4B-207ENST00000591519 GPR171O14626 319 aa9.17□□□□□ -0.94
VPS4B-207ENST00000591519 RAMP1O60894 148 aa9.17□□□□□ -0.94
VPS4B-207ENST00000591519 LYZL6O75951 148 aa9.17□□□□□ -0.94
VPS4B-207ENST00000591519 PMS2P2O95744 297 aa9.17□□□□□ -0.94
VPS4B-207ENST00000591519 OR12D1P0DN82 309 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms