RNA–Protein interactions for RNA: ENST00000590171.1

CIRBP-226, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-226ENST00000590171 TAB1Q15750 504 aa18.23■□□□□ 0.51
CIRBP-226ENST00000590171 PAGE3Q5JUK9 113 aa18.23■□□□□ 0.51
CIRBP-226ENST00000590171 ALKBH2Q6NS38 261 aa18.23■□□□□ 0.51
CIRBP-226ENST00000590171 CCDC103Q8IW40 242 aa18.23■□□□□ 0.51
CIRBP-226ENST00000590171 CLIP4Q8N3C7 705 aa18.23■□□□□ 0.51
CIRBP-226ENST00000590171 DDIT4LQ96D03 193 aa18.23■□□□□ 0.51
CIRBP-226ENST00000590171 ADAM19Q9H013 955 aa18.23■□□□□ 0.51
CIRBP-226ENST00000590171 RAD21L1Q9H4I0 556 aa18.23■□□□□ 0.51
CIRBP-226ENST00000590171 A4GALTQ9NPC4 353 aa18.23■□□□□ 0.51
CIRBP-226ENST00000590171 EMC3Q9P0I2 261 aa18.23■□□□□ 0.51
CIRBP-226ENST00000590171 TRAPPC4Q9Y296 219 aa18.23■□□□□ 0.51
CIRBP-226ENST00000590171 ITPR3Q14573 2671 aa18.23■□□□□ 0.51
CIRBP-226ENST00000590171 MED13LQ71F56 2210 aa18.22■□□□□ 0.51
CIRBP-226ENST00000590171 LYZL6O75951 148 aa18.22■□□□□ 0.51
CIRBP-226ENST00000590171 SASH3O75995 380 aa18.22■□□□□ 0.51
CIRBP-226ENST00000590171 PRG2P13727 222 aa18.22■□□□□ 0.51
CIRBP-226ENST00000590171 ATP4BP51164 291 aa18.22■□□□□ 0.51
CIRBP-226ENST00000590171 H3F3AP84243 136 aa18.22■□□□□ 0.51
CIRBP-226ENST00000590171 LARS2Q15031 903 aaKnown RBP18.22■□□□□ 0.51
CIRBP-226ENST00000590171 ZNF704Q6ZNC4 412 aaPredicted RBP18.22■□□□□ 0.51
CIRBP-226ENST00000590171 BHLHA15Q7RTS1 189 aaPredicted RBP18.22■□□□□ 0.51
CIRBP-226ENST00000590171 ZNF100Q8IYN0 542 aa18.22■□□□□ 0.51
CIRBP-226ENST00000590171 C10orf111Q8N326 155 aa18.22■□□□□ 0.51
CIRBP-226ENST00000590171 PIGXQ8TBF5 258 aa18.22■□□□□ 0.51
CIRBP-226ENST00000590171 PIGTQ969N2 578 aa18.22■□□□□ 0.51
CIRBP-226ENST00000590171 THOC1Q96FV9 657 aaKnown RBP18.22■□□□□ 0.51
CIRBP-226ENST00000590171 MAGEB18Q96M61 343 aa18.22■□□□□ 0.51
CIRBP-226ENST00000590171 CCL19Q99731 98 aa18.22■□□□□ 0.51
CIRBP-226ENST00000590171 PIP5K1AQ99755 562 aa18.22■□□□□ 0.51
CIRBP-226ENST00000590171 TMEM204Q9BSN7 226 aa18.22■□□□□ 0.51
CIRBP-226ENST00000590171 SPATA9Q9BWV2 254 aa18.22■□□□□ 0.51
CIRBP-226ENST00000590171 POTEKPQ9BYX7 375 aa18.22■□□□□ 0.51
CIRBP-226ENST00000590171 BCL2L10Q9HD36 194 aa18.22■□□□□ 0.51
CIRBP-226ENST00000590171 ZNF469Q96JG9 3925 aaPredicted RBP18.21■□□□□ 0.51
CIRBP-226ENST00000590171 NTF4P34130 210 aa18.21■□□□□ 0.51
CIRBP-226ENST00000590171 MAP2K6P52564 334 aa18.21■□□□□ 0.51
CIRBP-226ENST00000590171 SLC16A1P53985 500 aa18.21■□□□□ 0.51
CIRBP-226ENST00000590171 SQLEQ14534 574 aa18.21■□□□□ 0.51
CIRBP-226ENST00000590171 AGKQ53H12 422 aa18.21■□□□□ 0.51
CIRBP-226ENST00000590171 PRAMEF8Q5VWM4 474 aa18.21■□□□□ 0.51
CIRBP-226ENST00000590171 PRAMEF7Q5VXH5 474 aa18.21■□□□□ 0.51
CIRBP-226ENST00000590171 C20orf204Q6ZNR8 217 aa18.21■□□□□ 0.51
CIRBP-226ENST00000590171 CADM2Q8N3J6 435 aa18.21■□□□□ 0.51
CIRBP-226ENST00000590171 DLL4Q9NR61 685 aa18.21■□□□□ 0.51
CIRBP-226ENST00000590171 TMEM45AQ9NWC5 275 aa18.21■□□□□ 0.51
CIRBP-226ENST00000590171 VAPAQ9P0L0 249 aa18.21■□□□□ 0.51
CIRBP-226ENST00000590171 ZNF232Q9UNY5 417 aa18.21■□□□□ 0.51
CIRBP-226ENST00000590171 NOSIPQ9Y314 301 aaKnown RBP18.21■□□□□ 0.51
CIRBP-226ENST00000590171 IFT52Q9Y366 437 aa18.21■□□□□ 0.51
CIRBP-226ENST00000590171 RAI1Q7Z5J4 1906 aaPredicted RBP18.2■□□□□ 0.5
CIRBP-226ENST00000590171 TRBV5-3A0A0A0MS03 114 aa18.2■□□□□ 0.5
CIRBP-226ENST00000590171 GPR171O14626 319 aa18.2■□□□□ 0.5
CIRBP-226ENST00000590171 IGHV3-9P01782 118 aa18.2■□□□□ 0.5
CIRBP-226ENST00000590171 COX5AP20674 150 aa18.2■□□□□ 0.5
CIRBP-226ENST00000590171 IGHV1-2P23083 117 aa18.2■□□□□ 0.5
CIRBP-226ENST00000590171 SLC35A1P78382 337 aa18.2■□□□□ 0.5
CIRBP-226ENST00000590171 IRX1P78414 480 aaPredicted RBP18.2■□□□□ 0.5
CIRBP-226ENST00000590171 NKX6-1P78426 367 aaPredicted RBP18.2■□□□□ 0.5
CIRBP-226ENST00000590171 ZSWIM7Q19AV6 140 aa18.2■□□□□ 0.5
CIRBP-226ENST00000590171 ZNF311Q5JNZ3 666 aa18.2■□□□□ 0.5
CIRBP-226ENST00000590171 WBP2NLQ6ICG8 309 aa18.2■□□□□ 0.5
CIRBP-226ENST00000590171 SEZ6L2Q6UXD5 910 aa18.2■□□□□ 0.5
CIRBP-226ENST00000590171 SERPINA11Q86U17 422 aa18.2■□□□□ 0.5
CIRBP-226ENST00000590171 BBS10Q8TAM1 723 aa18.2■□□□□ 0.5
CIRBP-226ENST00000590171 STON2Q8WXE9 905 aa18.2■□□□□ 0.5
CIRBP-226ENST00000590171 HSD17B8Q92506 261 aa18.2■□□□□ 0.5
CIRBP-226ENST00000590171 CACYBPQ9HB71 228 aaKnown RBP18.2■□□□□ 0.5
CIRBP-226ENST00000590171 PRDM4Q9UKN5 801 aa18.2■□□□□ 0.5
CIRBP-226ENST00000590171 EIF1BO60739 113 aaKnown RBP18.19■□□□□ 0.5
CIRBP-226ENST00000590171 SMPD2O60906 423 aa18.19■□□□□ 0.5
CIRBP-226ENST00000590171 PGM3O95394 542 aa18.19■□□□□ 0.5
CIRBP-226ENST00000590171 CNOT4O95628 575 aaKnown RBP18.19■□□□□ 0.5
CIRBP-226ENST00000590171 ARAFP10398 606 aa18.19■□□□□ 0.5
CIRBP-226ENST00000590171 CXCR1P25024 350 aa18.19■□□□□ 0.5
CIRBP-226ENST00000590171 IDUAP35475 653 aa18.19■□□□□ 0.5
CIRBP-226ENST00000590171 RIPPLY3P57055 190 aa18.19■□□□□ 0.5
CIRBP-226ENST00000590171 COPZ1P61923 177 aa18.19■□□□□ 0.5
CIRBP-226ENST00000590171 FBXW9Q5XUX1 488 aa18.19■□□□□ 0.5
CIRBP-226ENST00000590171 ATG4DQ86TL0 474 aaPredicted RBP18.19■□□□□ 0.5
CIRBP-226ENST00000590171 NFKBIDQ8NI38 313 aa18.19■□□□□ 0.5
CIRBP-226ENST00000590171 APH1AQ96BI3 265 aa18.19■□□□□ 0.5
CIRBP-226ENST00000590171 USB1Q9BQ65 265 aaKnown RBP18.19■□□□□ 0.5
CIRBP-226ENST00000590171 RSPO3Q9BXY4 272 aaPredicted RBP18.19■□□□□ 0.5
CIRBP-226ENST00000590171 IKZF5Q9H5V7 419 aa18.19■□□□□ 0.5
CIRBP-226ENST00000590171 ARMC7Q9H6L4 198 aa18.19■□□□□ 0.5
CIRBP-226ENST00000590171 GMEB1Q9Y692 573 aa18.19■□□□□ 0.5
CIRBP-226ENST00000590171 A0A1W2PP18 115 aa18.18■□□□□ 0.5
CIRBP-226ENST00000590171 C5orf58C9J3I9 102 aa18.18■□□□□ 0.5
CIRBP-226ENST00000590171 FRS3O43559 492 aa18.18■□□□□ 0.5
CIRBP-226ENST00000590171 NCF2P19878 526 aaPredicted RBP18.18■□□□□ 0.5
CIRBP-226ENST00000590171 ADSLP30566 484 aaPredicted RBP18.18■□□□□ 0.5
CIRBP-226ENST00000590171 BNIP2Q12982 314 aa18.18■□□□□ 0.5
CIRBP-226ENST00000590171 CAPRIN1Q14444 709 aaKnown RBP18.18■□□□□ 0.5
CIRBP-226ENST00000590171 STK11Q15831 433 aa18.18■□□□□ 0.5
CIRBP-226ENST00000590171 NCMAPQ5T1S8 102 aa18.18■□□□□ 0.5
CIRBP-226ENST00000590171 GCNT6Q5T4J0 391 aa18.18■□□□□ 0.5
CIRBP-226ENST00000590171 PAQR6Q6TCH4 344 aa18.18■□□□□ 0.5
CIRBP-226ENST00000590171 LRRC75A-AS1Q8N1F1 130 aa18.18■□□□□ 0.5
CIRBP-226ENST00000590171 IGFBPL1Q8WX77 278 aa18.18■□□□□ 0.5
CIRBP-226ENST00000590171 C3orf49Q96BT1 292 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms