RNA–Protein interactions for RNA: ENST00000589116.1

CCBE1-203, Transcript of collagen and calcium binding EGF domains 1, humanhuman

TSL 1 (best)

Gene CCBE1, Length 1,691 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-203ENST00000589116 FBXL4Q9UKA2 621 aa10.98□□□□□ -0.65
CCBE1-203ENST00000589116 WIF1Q9Y5W5 379 aa10.98□□□□□ -0.65
CCBE1-203ENST00000589116 HELZ2Q9BYK8 2649 aaKnown RBP10.98□□□□□ -0.65
CCBE1-203ENST00000589116 SNTNA6NMZ2 147 aa10.98□□□□□ -0.65
CCBE1-203ENST00000589116 GNB5O14775 395 aa10.98□□□□□ -0.65
CCBE1-203ENST00000589116 SURF4O15260 269 aa10.98□□□□□ -0.65
CCBE1-203ENST00000589116 PRKYO43930 277 aa10.98□□□□□ -0.65
CCBE1-203ENST00000589116 PTP4A3O75365 173 aa10.98□□□□□ -0.65
CCBE1-203ENST00000589116 OR7A10O76100 309 aa10.98□□□□□ -0.65
CCBE1-203ENST00000589116 SERPINA7P05543 415 aa10.98□□□□□ -0.65
CCBE1-203ENST00000589116 PTGDSP41222 190 aa10.98□□□□□ -0.65
CCBE1-203ENST00000589116 POLR2HP52434 150 aaKnown RBP10.98□□□□□ -0.65
CCBE1-203ENST00000589116 MLF1P58340 268 aa10.98□□□□□ -0.65
CCBE1-203ENST00000589116 FXYD6P3P58550 94 aa10.98□□□□□ -0.65
CCBE1-203ENST00000589116 ANKDD1AQ495B1 522 aa10.98□□□□□ -0.65
CCBE1-203ENST00000589116 FOXB2Q5VYV0 432 aa10.98□□□□□ -0.65
CCBE1-203ENST00000589116 IGF2-ASQ6U949 168 aa10.98□□□□□ -0.65
CCBE1-203ENST00000589116 C5orf46Q6UWT4 87 aa10.98□□□□□ -0.65
CCBE1-203ENST00000589116 RTL4Q6ZR62 310 aa10.98□□□□□ -0.65
CCBE1-203ENST00000589116 GPR141Q7Z602 305 aa10.98□□□□□ -0.65
CCBE1-203ENST00000589116 GALNT15Q8N3T1 639 aa10.98□□□□□ -0.65
CCBE1-203ENST00000589116 LNX2Q8N448 690 aa10.98□□□□□ -0.65
CCBE1-203ENST00000589116 OR10G3Q8NGC4 313 aa10.98□□□□□ -0.65
CCBE1-203ENST00000589116 OR4Q3Q8NH05 313 aa10.98□□□□□ -0.65
CCBE1-203ENST00000589116 ASB15Q8WXK1 588 aa10.98□□□□□ -0.65
CCBE1-203ENST00000589116 SGCDQ92629 289 aa10.98□□□□□ -0.65
CCBE1-203ENST00000589116 FGF11Q92914 225 aa10.98□□□□□ -0.65
CCBE1-203ENST00000589116 PLEKHA8Q96JA3 519 aa10.98□□□□□ -0.65
CCBE1-203ENST00000589116 CCDC90BQ9GZT6 254 aa10.98□□□□□ -0.65
CCBE1-203ENST00000589116 PPP4R1LQ9P1A2 415 aa10.98□□□□□ -0.65
CCBE1-203ENST00000589116 ERVK-18Q9QC07 812 aa10.98□□□□□ -0.65
CCBE1-203ENST00000589116 OSGIN1Q9UJX0 560 aa10.98□□□□□ -0.65
CCBE1-203ENST00000589116 ZNF337Q9Y3M9 751 aa10.98□□□□□ -0.65
CCBE1-203ENST00000589116 RPL36Q9Y3U8 105 aaKnown RBP10.98□□□□□ -0.65
CCBE1-203ENST00000589116 WDFY3Q8IZQ1 3526 aa10.97□□□□□ -0.65
CCBE1-203ENST00000589116 LOC101059948A0A1B0GTJ6 334 aa10.97□□□□□ -0.65
CCBE1-203ENST00000589116 CYSRT1A8MQ03 144 aa10.97□□□□□ -0.65
CCBE1-203ENST00000589116 CDRT15L2A8MXV6 281 aa10.97□□□□□ -0.65
CCBE1-203ENST00000589116 BHLHE40O14503 412 aa10.97□□□□□ -0.65
CCBE1-203ENST00000589116 TLX2O43763 284 aaPredicted RBP10.97□□□□□ -0.65
CCBE1-203ENST00000589116 ENTPD6O75354 484 aa10.97□□□□□ -0.65
CCBE1-203ENST00000589116 NDUFB2O95178 105 aa10.97□□□□□ -0.65
CCBE1-203ENST00000589116 CDK1P06493 297 aa10.97□□□□□ -0.65
CCBE1-203ENST00000589116 PCMT1P22061 227 aa10.97□□□□□ -0.65
CCBE1-203ENST00000589116 CXCR1P25024 350 aa10.97□□□□□ -0.65
CCBE1-203ENST00000589116 RBMS1P29558 406 aaKnown RBP10.97□□□□□ -0.65
CCBE1-203ENST00000589116 SLC6A6P31641 620 aa10.97□□□□□ -0.65
CCBE1-203ENST00000589116 CASP3P42574 277 aa10.97□□□□□ -0.65
CCBE1-203ENST00000589116 SLC15A1P46059 708 aa10.97□□□□□ -0.65
CCBE1-203ENST00000589116 NUDT6P53370 316 aa10.97□□□□□ -0.65
CCBE1-203ENST00000589116 TOMM34Q15785 309 aaPredicted RBP10.97□□□□□ -0.65
CCBE1-203ENST00000589116 NEDD8Q15843 81 aa10.97□□□□□ -0.65
CCBE1-203ENST00000589116 XAF1Q6GPH4 301 aa10.97□□□□□ -0.65
CCBE1-203ENST00000589116 H3F3CQ6NXT2 135 aa10.97□□□□□ -0.65
CCBE1-203ENST00000589116 SLC46A3Q7Z3Q1 461 aa10.97□□□□□ -0.65
CCBE1-203ENST00000589116 GGHQ92820 318 aa10.97□□□□□ -0.65
CCBE1-203ENST00000589116 LRR1Q96L50 414 aa10.97□□□□□ -0.65
CCBE1-203ENST00000589116 KLHDC3Q9BQ90 382 aa10.97□□□□□ -0.65
CCBE1-203ENST00000589116 RBM38Q9H0Z9 239 aaKnown RBP10.97□□□□□ -0.65
CCBE1-203ENST00000589116 FN3KQ9H479 309 aa10.97□□□□□ -0.65
CCBE1-203ENST00000589116 CDCP1Q9H5V8 836 aa10.97□□□□□ -0.65
CCBE1-203ENST00000589116 DNAJC27Q9NZQ0 273 aa10.97□□□□□ -0.65
CCBE1-203ENST00000589116 CHCHD2Q9Y6H1 151 aaPredicted RBP10.97□□□□□ -0.65
CCBE1-203ENST00000589116 LOC400499M0QZD8 3231 aa10.97□□□□□ -0.65
CCBE1-203ENST00000589116 IGSF10Q6WRI0 2623 aa10.97□□□□□ -0.65
CCBE1-203ENST00000589116 TRAV27A0A087WT01 109 aa10.96□□□□□ -0.65
CCBE1-203ENST00000589116 C17orf51A8MQB3 221 aa10.96□□□□□ -0.65
CCBE1-203ENST00000589116 KDM4EB2RXH2 506 aaPredicted RBP10.96□□□□□ -0.65
CCBE1-203ENST00000589116 ETV2O00321 342 aaPredicted RBP10.96□□□□□ -0.65
CCBE1-203ENST00000589116 PRODHO43272 600 aa10.96□□□□□ -0.65
CCBE1-203ENST00000589116 SLC25A12O75746 678 aa10.96□□□□□ -0.65
CCBE1-203ENST00000589116 MT-ND2P03891 347 aa10.96□□□□□ -0.65
CCBE1-203ENST00000589116 FUT1P19526 365 aa10.96□□□□□ -0.65
CCBE1-203ENST00000589116 F8A1P23610 371 aa10.96□□□□□ -0.65
CCBE1-203ENST00000589116 PRPS1P60891 318 aa10.96□□□□□ -0.65
CCBE1-203ENST00000589116 RPS4XP62701 263 aaKnown RBP10.96□□□□□ -0.65
CCBE1-203ENST00000589116 PIGFQ07326 219 aa10.96□□□□□ -0.65
CCBE1-203ENST00000589116 IL10RAQ13651 578 aa10.96□□□□□ -0.65
CCBE1-203ENST00000589116 TUBA3CQ13748 450 aa10.96□□□□□ -0.65
CCBE1-203ENST00000589116 TBCEQ15813 527 aaPredicted RBP10.96□□□□□ -0.65
CCBE1-203ENST00000589116 ZNF74Q16587 644 aa10.96□□□□□ -0.65
CCBE1-203ENST00000589116 SYT14P1Q58G82 188 aa10.96□□□□□ -0.65
CCBE1-203ENST00000589116 JMJD6Q6NYC1 403 aaPredicted RBP10.96□□□□□ -0.65
CCBE1-203ENST00000589116 C9orf43Q8TAL5 461 aaPredicted RBP10.96□□□□□ -0.65
CCBE1-203ENST00000589116 ADAMTS17Q8TE56 1095 aa10.96□□□□□ -0.65
CCBE1-203ENST00000589116 ADAMTS14Q8WXS8 1223 aa10.96□□□□□ -0.65
CCBE1-203ENST00000589116 FCGR1BQ92637 280 aa10.96□□□□□ -0.65
CCBE1-203ENST00000589116 MUL1Q969V5 352 aa10.96□□□□□ -0.65
CCBE1-203ENST00000589116 ZNF524Q96C55 264 aa10.96□□□□□ -0.65
CCBE1-203ENST00000589116 DGCR14Q96DF8 476 aaKnown RBP10.96□□□□□ -0.65
CCBE1-203ENST00000589116 FRMD6Q96NE9 622 aa10.96□□□□□ -0.65
CCBE1-203ENST00000589116 RHNO1Q9BSD3 238 aa10.96□□□□□ -0.65
CCBE1-203ENST00000589116 NDEL1Q9GZM8 345 aa10.96□□□□□ -0.65
CCBE1-203ENST00000589116 MCCC2Q9HCC0 563 aa10.96□□□□□ -0.65
CCBE1-203ENST00000589116 GALNT9Q9HCQ5 603 aa10.96□□□□□ -0.65
CCBE1-203ENST00000589116 WDR70Q9NW82 654 aa10.96□□□□□ -0.65
CCBE1-203ENST00000589116 MPDZO75970 2070 aa10.96□□□□□ -0.66
CCBE1-203ENST00000589116 TRAV36DV7A0A075B6V5 113 aa10.95□□□□□ -0.66
CCBE1-203ENST00000589116 TNFSF12-TNFSF13A0A0A6YY99 330 aa10.95□□□□□ -0.66
CCBE1-203ENST00000589116 IRGMA1A4Y4 181 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms