RNA–Protein interactions for RNA: ENST00000588692.5

DDX39A-208, Transcript of DExD-box helicase 39A, humanhuman

TSL 5

Gene DDX39A, Length 1,478 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-208ENST00000588692 ZNF716A6NP11 495 aa12.81□□□□□ -0.36
DDX39A-208ENST00000588692 KLF4O43474 513 aa12.81□□□□□ -0.36
DDX39A-208ENST00000588692 ADAP00813 363 aa12.81□□□□□ -0.36
DDX39A-208ENST00000588692 KLK2P20151 261 aa12.81□□□□□ -0.36
DDX39A-208ENST00000588692 SLC16A1P53985 500 aa12.81□□□□□ -0.36
DDX39A-208ENST00000588692 COPZ1P61923 177 aa12.81□□□□□ -0.36
DDX39A-208ENST00000588692 SLC35A1P78382 337 aa12.81□□□□□ -0.36
DDX39A-208ENST00000588692 ACKR1Q16570 336 aa12.81□□□□□ -0.36
DDX39A-208ENST00000588692 RPS26P11Q5JNZ5 115 aaPredicted RBP12.81□□□□□ -0.36
DDX39A-208ENST00000588692 SSX8Q7RTT4 187 aa12.81□□□□□ -0.36
DDX39A-208ENST00000588692 WFDC8Q8IUA0 241 aa12.81□□□□□ -0.36
DDX39A-208ENST00000588692 BBS10Q8TAM1 723 aa12.81□□□□□ -0.36
DDX39A-208ENST00000588692 SLC35B4Q969S0 331 aa12.81□□□□□ -0.36
DDX39A-208ENST00000588692 HS3ST6Q96QI5 342 aa12.81□□□□□ -0.36
DDX39A-208ENST00000588692 POTEKPQ9BYX7 375 aa12.81□□□□□ -0.36
DDX39A-208ENST00000588692 ADAM19Q9H013 955 aa12.81□□□□□ -0.36
DDX39A-208ENST00000588692 SLC52A3Q9NQ40 469 aa12.81□□□□□ -0.36
DDX39A-208ENST00000588692 SLC25A37Q9NYZ2 338 aa12.81□□□□□ -0.36
DDX39A-208ENST00000588692 CORO2BQ9UQ03 480 aa12.81□□□□□ -0.36
DDX39A-208ENST00000588692 ZNF814B7Z6K7 855 aa12.8□□□□□ -0.36
DDX39A-208ENST00000588692 C5orf58C9J3I9 102 aa12.8□□□□□ -0.36
DDX39A-208ENST00000588692 CD99P14209 185 aa12.8□□□□□ -0.36
DDX39A-208ENST00000588692 CCNA2P20248 432 aa12.8□□□□□ -0.36
DDX39A-208ENST00000588692 CXCR1P25024 350 aa12.8□□□□□ -0.36
DDX39A-208ENST00000588692 ACAA2P42765 397 aaKnown RBP12.8□□□□□ -0.36
DDX39A-208ENST00000588692 OR2B6P58173 313 aa12.8□□□□□ -0.36
DDX39A-208ENST00000588692 H3F3AP84243 136 aa12.8□□□□□ -0.36
DDX39A-208ENST00000588692 AGKQ53H12 422 aa12.8□□□□□ -0.36
DDX39A-208ENST00000588692 WBP2NLQ6ICG8 309 aa12.8□□□□□ -0.36
DDX39A-208ENST00000588692 MSRB3Q8IXL7 192 aa12.8□□□□□ -0.36
DDX39A-208ENST00000588692 ZNF100Q8IYN0 542 aa12.8□□□□□ -0.36
DDX39A-208ENST00000588692 HSD17B8Q92506 261 aa12.8□□□□□ -0.36
DDX39A-208ENST00000588692 TMUB1Q9BVT8 246 aa12.8□□□□□ -0.36
DDX39A-208ENST00000588692 UBTD1Q9HAC8 227 aa12.8□□□□□ -0.36
DDX39A-208ENST00000588692 NGBQ9NPG2 151 aa12.8□□□□□ -0.36
DDX39A-208ENST00000588692 TRIM33Q9UPN9 1127 aa12.8□□□□□ -0.36
DDX39A-208ENST00000588692 NOSIPQ9Y314 301 aaKnown RBP12.8□□□□□ -0.36
DDX39A-208ENST00000588692 TRBV5-3A0A0A0MS03 114 aa12.79□□□□□ -0.36
DDX39A-208ENST00000588692 A0A1W2PP18 115 aa12.79□□□□□ -0.36
DDX39A-208ENST00000588692 PGM3O95394 542 aa12.79□□□□□ -0.36
DDX39A-208ENST00000588692 NUDT7P0C024 238 aa12.79□□□□□ -0.36
DDX39A-208ENST00000588692 GKN3PP0CG01 181 aa12.79□□□□□ -0.36
DDX39A-208ENST00000588692 ETS2P15036 469 aa12.79□□□□□ -0.36
DDX39A-208ENST00000588692 COX5AP20674 150 aa12.79□□□□□ -0.36
DDX39A-208ENST00000588692 ZNF311Q5JNZ3 666 aa12.79□□□□□ -0.36
DDX39A-208ENST00000588692 ZNF704Q6ZNC4 412 aaPredicted RBP12.79□□□□□ -0.36
DDX39A-208ENST00000588692 BHLHA15Q7RTS1 189 aaPredicted RBP12.79□□□□□ -0.36
DDX39A-208ENST00000588692 CLIP4Q8N3C7 705 aa12.79□□□□□ -0.36
DDX39A-208ENST00000588692 MAL2Q969L2 176 aa12.79□□□□□ -0.36
DDX39A-208ENST00000588692 APH1AQ96BI3 265 aa12.79□□□□□ -0.36
DDX39A-208ENST00000588692 PLPPR2Q96GM1 343 aa12.79□□□□□ -0.36
DDX39A-208ENST00000588692 NAA11Q9BSU3 229 aaPredicted RBP12.79□□□□□ -0.36
DDX39A-208ENST00000588692 PRSS50Q9UI38 385 aa12.79□□□□□ -0.36
DDX39A-208ENST00000588692 EDF1O60869 148 aaKnown RBP12.78□□□□□ -0.36
DDX39A-208ENST00000588692 GPIP06744 558 aa12.78□□□□□ -0.36
DDX39A-208ENST00000588692 ARAFP10398 606 aa12.78□□□□□ -0.36
DDX39A-208ENST00000588692 IMPDH2P12268 514 aa12.78□□□□□ -0.36
DDX39A-208ENST00000588692 NCF2P19878 526 aaPredicted RBP12.78□□□□□ -0.36
DDX39A-208ENST00000588692 PRKAR1BP31321 381 aa12.78□□□□□ -0.36
DDX39A-208ENST00000588692 IDUAP35475 653 aa12.78□□□□□ -0.36
DDX39A-208ENST00000588692 RIPPLY3P57055 190 aa12.78□□□□□ -0.36
DDX39A-208ENST00000588692 ADAM8P78325 824 aa12.78□□□□□ -0.36
DDX39A-208ENST00000588692 TAB1Q15750 504 aa12.78□□□□□ -0.36
DDX39A-208ENST00000588692 PAGE3Q5JUK9 113 aa12.78□□□□□ -0.36
DDX39A-208ENST00000588692 GCNT6Q5T4J0 391 aa12.78□□□□□ -0.36
DDX39A-208ENST00000588692 FBXW9Q5XUX1 488 aa12.78□□□□□ -0.36
DDX39A-208ENST00000588692 PAQR6Q6TCH4 344 aa12.78□□□□□ -0.36
DDX39A-208ENST00000588692 KRT73Q86Y46 540 aa12.78□□□□□ -0.36
DDX39A-208ENST00000588692 LRRC75A-AS1Q8N1F1 130 aa12.78□□□□□ -0.36
DDX39A-208ENST00000588692 CADM2Q8N3J6 435 aa12.78□□□□□ -0.36
DDX39A-208ENST00000588692 ZNF775Q96BV0 537 aaPredicted RBP12.78□□□□□ -0.36
DDX39A-208ENST00000588692 CCL19Q99731 98 aa12.78□□□□□ -0.36
DDX39A-208ENST00000588692 TMEM204Q9BSN7 226 aa12.78□□□□□ -0.36
DDX39A-208ENST00000588692 SPATA5L1Q9BVQ7 753 aa12.78□□□□□ -0.36
DDX39A-208ENST00000588692 VAPAQ9P0L0 249 aa12.78□□□□□ -0.36
DDX39A-208ENST00000588692 SLAMF8Q9P0V8 285 aa12.78□□□□□ -0.36
DDX39A-208ENST00000588692 SLC9A8Q9Y2E8 581 aa12.78□□□□□ -0.36
DDX39A-208ENST00000588692 CHST2Q9Y4C5 530 aa12.78□□□□□ -0.36
DDX39A-208ENST00000588692 FLNAP21333 2647 aaKnown RBP12.78□□□□□ -0.36
DDX39A-208ENST00000588692 DSCAMO60469 2012 aa12.78□□□□□ -0.36
DDX39A-208ENST00000588692 ZC3H12DA2A288 527 aaKnown RBP12.78□□□□□ -0.36
DDX39A-208ENST00000588692 A8MVM7 634 aa12.78□□□□□ -0.36
DDX39A-208ENST00000588692 EVPLLA8MZ36 301 aa12.78□□□□□ -0.36
DDX39A-208ENST00000588692 SMPD2O60906 423 aa12.78□□□□□ -0.36
DDX39A-208ENST00000588692 TMCC2O75069 709 aa12.78□□□□□ -0.36
DDX39A-208ENST00000588692 MRPL33O75394 65 aaKnown RBP12.78□□□□□ -0.36
DDX39A-208ENST00000588692 SASH3O75995 380 aa12.78□□□□□ -0.36
DDX39A-208ENST00000588692 GPX2P18283 190 aa12.78□□□□□ -0.36
DDX39A-208ENST00000588692 HOXC12P31275 282 aa12.78□□□□□ -0.36
DDX39A-208ENST00000588692 TSC22D1Q15714 1073 aa12.78□□□□□ -0.36
DDX39A-208ENST00000588692 SHEQ5VZ18 495 aa12.78□□□□□ -0.36
DDX39A-208ENST00000588692 REEP3Q6NUK4 255 aa12.78□□□□□ -0.36
DDX39A-208ENST00000588692 SERPINA11Q86U17 422 aa12.78□□□□□ -0.36
DDX39A-208ENST00000588692 P2RY8Q86VZ1 359 aa12.78□□□□□ -0.36
DDX39A-208ENST00000588692 CCDC103Q8IW40 242 aa12.78□□□□□ -0.36
DDX39A-208ENST00000588692 DNAJA3Q96EY1 480 aa12.78□□□□□ -0.36
DDX39A-208ENST00000588692 ZNF385DQ9H6B1 395 aa12.78□□□□□ -0.36
DDX39A-208ENST00000588692 TMEM38AQ9H6F2 299 aa12.78□□□□□ -0.36
DDX39A-208ENST00000588692 ESRP2Q9H6T0 727 aaKnown RBP12.78□□□□□ -0.36
DDX39A-208ENST00000588692 NPHS2Q9NP85 383 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms