RNA–Protein interactions for RNA: ENST00000588210.1

CCDC43-203, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC43, Length 2,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-203ENST00000588210 TRIQKQ629K1 86 aa13.45□□□□□ -0.26
CCDC43-203ENST00000588210 TTLL10Q6ZVT0 673 aa13.45□□□□□ -0.26
CCDC43-203ENST00000588210 GDF7Q7Z4P5 450 aa13.45□□□□□ -0.26
CCDC43-203ENST00000588210 VN1R4Q7Z5H5 301 aa13.45□□□□□ -0.26
CCDC43-203ENST00000588210 PEX5LQ8IYB4 626 aa13.45□□□□□ -0.26
CCDC43-203ENST00000588210 COMMD3Q9UBI1 195 aa13.45□□□□□ -0.26
CCDC43-203ENST00000588210 DHCR7Q9UBM7 475 aaKnown RBP13.45□□□□□ -0.26
CCDC43-203ENST00000588210 ZNF780BQ9Y6R6 833 aa13.45□□□□□ -0.26
CCDC43-203ENST00000588210 IGF2RP11717 2491 aa13.45□□□□□ -0.26
CCDC43-203ENST00000588210 TPRP12270 2363 aaKnown RBP13.45□□□□□ -0.26
CCDC43-203ENST00000588210 A0A1B0GX78 115 aa13.44□□□□□ -0.26
CCDC43-203ENST00000588210 GABRPO00591 440 aa13.44□□□□□ -0.26
CCDC43-203ENST00000588210 SCO2O43819 266 aa13.44□□□□□ -0.26
CCDC43-203ENST00000588210 HPGDSO60760 199 aa13.44□□□□□ -0.26
CCDC43-203ENST00000588210 THY1P04216 161 aa13.44□□□□□ -0.26
CCDC43-203ENST00000588210 SLC2A2P11168 524 aaPredicted RBP13.44□□□□□ -0.26
CCDC43-203ENST00000588210 ALAS2P22557 587 aa13.44□□□□□ -0.26
CCDC43-203ENST00000588210 CPN2P22792 545 aa13.44□□□□□ -0.26
CCDC43-203ENST00000588210 APEX1P27695 318 aaKnown RBP13.44□□□□□ -0.26
CCDC43-203ENST00000588210 GPR4P46093 362 aa13.44□□□□□ -0.26
CCDC43-203ENST00000588210 RAB8AP61006 207 aa13.44□□□□□ -0.26
CCDC43-203ENST00000588210 STXBP1P61764 594 aaKnown RBP13.44□□□□□ -0.26
CCDC43-203ENST00000588210 HOXC5Q00444 222 aa13.44□□□□□ -0.26
CCDC43-203ENST00000588210 ZNF385CQ66K41 422 aaPredicted RBP13.44□□□□□ -0.26
CCDC43-203ENST00000588210 FRRS1Q6ZNA5 592 aa13.44□□□□□ -0.26
CCDC43-203ENST00000588210 ASPGQ86U10 573 aa13.44□□□□□ -0.26
CCDC43-203ENST00000588210 NRMQ8IXM6 262 aa13.44□□□□□ -0.26
CCDC43-203ENST00000588210 NEIL3Q8TAT5 605 aa13.44□□□□□ -0.26
CCDC43-203ENST00000588210 DNAJA4Q8WW22 397 aaPredicted RBP13.44□□□□□ -0.26
CCDC43-203ENST00000588210 MR1Q95460 341 aa13.44□□□□□ -0.26
CCDC43-203ENST00000588210 SLC41A3Q96GZ6 507 aa13.44□□□□□ -0.26
CCDC43-203ENST00000588210 MS4A4EQ96PG1 132 aa13.44□□□□□ -0.26
CCDC43-203ENST00000588210 CCNL2Q96S94 520 aaPredicted RBP13.44□□□□□ -0.26
CCDC43-203ENST00000588210 DCLRE1CQ96SD1 692 aaKnown RBP13.44□□□□□ -0.26
CCDC43-203ENST00000588210 MCHR1Q99705 422 aa13.44□□□□□ -0.26
CCDC43-203ENST00000588210 FAM117AQ9C073 453 aa13.44□□□□□ -0.26
CCDC43-203ENST00000588210 WDR70Q9NW82 654 aa13.44□□□□□ -0.26
CCDC43-203ENST00000588210 NTMQ9P121 344 aa13.44□□□□□ -0.26
CCDC43-203ENST00000588210 NUFIP1Q9UHK0 495 aaKnown RBP13.44□□□□□ -0.26
CCDC43-203ENST00000588210 ZNF443Q9Y2A4 671 aaPredicted RBP13.44□□□□□ -0.26
CCDC43-203ENST00000588210 PCDHGB7Q9Y5F8 929 aa13.44□□□□□ -0.26
CCDC43-203ENST00000588210 LOC101059948A0A1B0GTJ6 334 aa13.44□□□□□ -0.26
CCDC43-203ENST00000588210 DUXAA6NLW8 204 aa13.44□□□□□ -0.26
CCDC43-203ENST00000588210 CENPBD1B2RD01 187 aa13.44□□□□□ -0.26
CCDC43-203ENST00000588210 TRIM3O75382 744 aaPredicted RBP13.44□□□□□ -0.26
CCDC43-203ENST00000588210 CH25HO95992 272 aa13.44□□□□□ -0.26
CCDC43-203ENST00000588210 HMGN1P05114 100 aa13.44□□□□□ -0.26
CCDC43-203ENST00000588210 YES1P07947 543 aa13.44□□□□□ -0.26
CCDC43-203ENST00000588210 SLC35G6P0C7Q6 338 aa13.44□□□□□ -0.26
CCDC43-203ENST00000588210 BDH1Q02338 343 aa13.44□□□□□ -0.26
CCDC43-203ENST00000588210 TLE3Q04726 772 aa13.44□□□□□ -0.26
CCDC43-203ENST00000588210 LTB4RQ15722 352 aa13.44□□□□□ -0.26
CCDC43-203ENST00000588210 ZNF791Q3KP31 576 aaPredicted RBP13.44□□□□□ -0.26
CCDC43-203ENST00000588210 C1QTNF12Q5T7M4 302 aa13.44□□□□□ -0.26
CCDC43-203ENST00000588210 VASNQ6EMK4 673 aa13.44□□□□□ -0.26
CCDC43-203ENST00000588210 MZT2AQ6P582 158 aa13.44□□□□□ -0.26
CCDC43-203ENST00000588210 NOXA1Q86UR1 476 aa13.44□□□□□ -0.26
CCDC43-203ENST00000588210 Q8N402 240 aa13.44□□□□□ -0.26
CCDC43-203ENST00000588210 OR2T33Q8NG76 320 aa13.44□□□□□ -0.26
CCDC43-203ENST00000588210 ADAMTS15Q8TE58 950 aa13.44□□□□□ -0.26
CCDC43-203ENST00000588210 SPRYD4Q8WW59 207 aaPredicted RBP13.44□□□□□ -0.26
CCDC43-203ENST00000588210 TMED9Q9BVK6 235 aa13.44□□□□□ -0.26
CCDC43-203ENST00000588210 AKIRIN1Q9H9L7 192 aaPredicted RBP13.44□□□□□ -0.26
CCDC43-203ENST00000588210 RBFOX1Q9NWB1 397 aaKnown RBP13.44□□□□□ -0.26
CCDC43-203ENST00000588210 CBLCQ9ULV8 474 aa13.44□□□□□ -0.26
CCDC43-203ENST00000588210 NTNG1Q9Y2I2 539 aa13.44□□□□□ -0.26
CCDC43-203ENST00000588210 SCN3AQ9NY46 2000 aa13.44□□□□□ -0.26
CCDC43-203ENST00000588210 C21orf140B9A014 251 aa13.43□□□□□ -0.26
CCDC43-203ENST00000588210 J3QRE1 110 aa13.43□□□□□ -0.26
CCDC43-203ENST00000588210 P2RX6O15547 441 aa13.43□□□□□ -0.26
CCDC43-203ENST00000588210 PIP5K1CO60331 668 aa13.43□□□□□ -0.26
CCDC43-203ENST00000588210 AGR2O95994 175 aa13.43□□□□□ -0.26
CCDC43-203ENST00000588210 TCN2P20062 427 aa13.43□□□□□ -0.26
CCDC43-203ENST00000588210 EVX1P49640 407 aa13.43□□□□□ -0.26
CCDC43-203ENST00000588210 UCNP55089 124 aa13.43□□□□□ -0.26
CCDC43-203ENST00000588210 DCDP81605 110 aaKnown RBP13.43□□□□□ -0.26
CCDC43-203ENST00000588210 FAM53BQ14153 422 aa13.43□□□□□ -0.26
CCDC43-203ENST00000588210 C6orf183Q5T699 404 aa13.43□□□□□ -0.26
CCDC43-203ENST00000588210 MFSD12Q6NUT3 480 aa13.43□□□□□ -0.26
CCDC43-203ENST00000588210 MZT2BQ6NZ67 158 aa13.43□□□□□ -0.26
CCDC43-203ENST00000588210 CDC73Q6P1J9 531 aa13.43□□□□□ -0.26
CCDC43-203ENST00000588210 FAM199XQ6PEV8 388 aaPredicted RBP13.43□□□□□ -0.26
CCDC43-203ENST00000588210 ZNF322Q6U7Q0 402 aaPredicted RBP13.43□□□□□ -0.26
CCDC43-203ENST00000588210 C19orf18Q8NEA5 215 aa13.43□□□□□ -0.26
CCDC43-203ENST00000588210 BBS1Q8NFJ9 593 aa13.43□□□□□ -0.26
CCDC43-203ENST00000588210 KAT2AQ92830 837 aa13.43□□□□□ -0.26
CCDC43-203ENST00000588210 GAL3ST3Q96A11 431 aa13.43□□□□□ -0.26
CCDC43-203ENST00000588210 MVB12AQ96EY5 273 aa13.43□□□□□ -0.26
CCDC43-203ENST00000588210 SLC35A4Q96G79 324 aa13.43□□□□□ -0.26
CCDC43-203ENST00000588210 C10orf90Q96M02 699 aa13.43□□□□□ -0.26
CCDC43-203ENST00000588210 TTYH2Q9BSA4 534 aa13.43□□□□□ -0.26
CCDC43-203ENST00000588210 RNF32Q9H0A6 362 aa13.43□□□□□ -0.26
CCDC43-203ENST00000588210 RANGRFQ9HD47 186 aaPredicted RBP13.43□□□□□ -0.26
CCDC43-203ENST00000588210 KRCC1Q9NPI7 259 aaPredicted RBP13.43□□□□□ -0.26
CCDC43-203ENST00000588210 ADAM30Q9UKF2 790 aa13.43□□□□□ -0.26
CCDC43-203ENST00000588210 NOX1Q9Y5S8 564 aa13.43□□□□□ -0.26
CCDC43-203ENST00000588210 SHISA3A0PJX4 238 aa13.43□□□□□ -0.26
CCDC43-203ENST00000588210 FCMRO60667 390 aa13.43□□□□□ -0.26
CCDC43-203ENST00000588210 ONECUT2O95948 504 aa13.43□□□□□ -0.26
CCDC43-203ENST00000588210 FAM157BP0CG42 384 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms