RNA–Protein interactions for RNA: ENST00000588009.1

TUBD1-208, Transcript of tubulin delta 1, human

TSL 3

Gene TUBD1, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TUBD1-208	ENST00000588009	BCL7A	Q4VC05	210 aa		4.25	□□□□□ -1.73
TUBD1-208	ENST00000588009	OTUD3	Q5T2D3	398 aa	Predicted RBP	4.25	□□□□□ -1.73
TUBD1-208	ENST00000588009	UTS2B	Q765I0	119 aa		4.25	□□□□□ -1.73
TUBD1-208	ENST00000588009	PAQR7	Q86WK9	346 aa		4.25	□□□□□ -1.73
TUBD1-208	ENST00000588009	CCDC65	Q8IXS2	484 aa		4.25	□□□□□ -1.73
TUBD1-208	ENST00000588009	ZNF440	Q8IYI8	595 aa		4.25	□□□□□ -1.73
TUBD1-208	ENST00000588009	KCNG3	Q8TAE7	436 aa		4.25	□□□□□ -1.73
TUBD1-208	ENST00000588009	ZNF689	Q96CS4	500 aa	Predicted RBP	4.25	□□□□□ -1.73
TUBD1-208	ENST00000588009	MS4A14	Q96JA4	679 aa		4.25	□□□□□ -1.73
TUBD1-208	ENST00000588009	RBM4B	Q9BQ04	359 aa	Known RBP	4.25	□□□□□ -1.73
TUBD1-208	ENST00000588009	NCOR1P1	Q9H4R4	102 aa		4.25	□□□□□ -1.73
TUBD1-208	ENST00000588009	CA5B	Q9Y2D0	317 aa		4.25	□□□□□ -1.73
TUBD1-208	ENST00000588009	PPIAL4A	Q9Y536	164 aa		4.25	□□□□□ -1.73
TUBD1-208	ENST00000588009	WIZ	O95785	1651 aa		4.25	□□□□□ -1.73
TUBD1-208	ENST00000588009	TNRC18	O15417	2968 aa	Predicted RBP	4.25	□□□□□ -1.73
TUBD1-208	ENST00000588009	STRCP1	A6NGW2	1772 aa		4.25	□□□□□ -1.73
TUBD1-208	ENST00000588009		A0A1B0GWB2	263 aa		4.24	□□□□□ -1.73
TUBD1-208	ENST00000588009		A0A1W2PPE3	182 aa		4.24	□□□□□ -1.73
TUBD1-208	ENST00000588009	VSTM2B	A6NLU5	285 aa		4.24	□□□□□ -1.73
TUBD1-208	ENST00000588009	ZNF705E	A8MWA4	302 aa	Predicted RBP	4.24	□□□□□ -1.73
TUBD1-208	ENST00000588009	TRDC	B7Z8K6	153 aa		4.24	□□□□□ -1.73
TUBD1-208	ENST00000588009	KIF2A	O00139	706 aa	Predicted RBP	4.24	□□□□□ -1.73
TUBD1-208	ENST00000588009	DNALI1	O14645	258 aa	Predicted RBP	4.24	□□□□□ -1.73
TUBD1-208	ENST00000588009	PABPC4L	P0CB38	370 aa	Known RBP	4.24	□□□□□ -1.73
TUBD1-208	ENST00000588009	RNH1	P13489	461 aa	Known RBP	4.24	□□□□□ -1.73
TUBD1-208	ENST00000588009	NMT1	P30419	496 aa	Known RBP	4.24	□□□□□ -1.73
TUBD1-208	ENST00000588009	CASP14	P31944	242 aa		4.24	□□□□□ -1.73
TUBD1-208	ENST00000588009	GYG1	P46976	350 aa		4.24	□□□□□ -1.73
TUBD1-208	ENST00000588009	RPL34	P49207	117 aa	Known RBP	4.24	□□□□□ -1.73
TUBD1-208	ENST00000588009	HNRNPA3	P51991	378 aa	Known RBP	4.24	□□□□□ -1.73
TUBD1-208	ENST00000588009	RPS8	P62241	208 aa	Known RBP	4.24	□□□□□ -1.73
TUBD1-208	ENST00000588009	RPL32	P62910	135 aa	Known RBP	4.24	□□□□□ -1.73
TUBD1-208	ENST00000588009	BST2	Q10589	180 aa	Known RBP	4.24	□□□□□ -1.73
TUBD1-208	ENST00000588009	VGLL4	Q14135	290 aa		4.24	□□□□□ -1.73
TUBD1-208	ENST00000588009	GK3P	Q14409	553 aa		4.24	□□□□□ -1.73
TUBD1-208	ENST00000588009	SLC22A6	Q4U2R8	563 aa		4.24	□□□□□ -1.73
TUBD1-208	ENST00000588009	CARD17	Q5XLA6	110 aa		4.24	□□□□□ -1.73
TUBD1-208	ENST00000588009	CCDC137	Q6PK04	289 aa	Known RBP	4.24	□□□□□ -1.73
TUBD1-208	ENST00000588009	SVOPL	Q8N434	492 aa		4.24	□□□□□ -1.73
TUBD1-208	ENST00000588009	CCDC26	Q8TAB7	109 aa		4.24	□□□□□ -1.73
TUBD1-208	ENST00000588009	FAM110B	Q8TC76	370 aa		4.24	□□□□□ -1.73
TUBD1-208	ENST00000588009	RASL10A	Q92737	203 aa		4.24	□□□□□ -1.73
TUBD1-208	ENST00000588009	MCHR1	Q99705	422 aa		4.24	□□□□□ -1.73
TUBD1-208	ENST00000588009	SOST	Q9BQB4	213 aa		4.24	□□□□□ -1.73
TUBD1-208	ENST00000588009	DPH7	Q9BTV6	452 aa		4.24	□□□□□ -1.73
TUBD1-208	ENST00000588009	SLITRK2	Q9H156	845 aa		4.24	□□□□□ -1.73
TUBD1-208	ENST00000588009	ZNF581	Q9P0T4	197 aa		4.24	□□□□□ -1.73
TUBD1-208	ENST00000588009	DPM3	Q9P2X0	92 aa		4.24	□□□□□ -1.73
TUBD1-208	ENST00000588009	CLSPN	Q9HAW4	1339 aa		4.23	□□□□□ -1.73
TUBD1-208	ENST00000588009	CFAP65	Q6ZU64	1925 aa	Known RBP	4.23	□□□□□ -1.73
TUBD1-208	ENST00000588009		A0A075B6Q4	140 aa		4.23	□□□□□ -1.73
TUBD1-208	ENST00000588009	ABCD4	O14678	606 aa		4.23	□□□□□ -1.73
TUBD1-208	ENST00000588009	PI15	O43692	258 aa		4.23	□□□□□ -1.73
TUBD1-208	ENST00000588009	CACNG3	O60359	315 aa		4.23	□□□□□ -1.73
TUBD1-208	ENST00000588009	HCN1	O60741	890 aa		4.23	□□□□□ -1.73
TUBD1-208	ENST00000588009	LYPD3	O95274	346 aa		4.23	□□□□□ -1.73
TUBD1-208	ENST00000588009	CRYGB	P07316	175 aa		4.23	□□□□□ -1.73
TUBD1-208	ENST00000588009	SLC35E2	P0CK97	266 aa		4.23	□□□□□ -1.73
TUBD1-208	ENST00000588009	TROVE2	P10155	538 aa	Known RBP eCLIP	4.23	□□□□□ -1.73
TUBD1-208	ENST00000588009	COX5A	P20674	150 aa		4.23	□□□□□ -1.73
TUBD1-208	ENST00000588009	IL2RG	P31785	369 aa		4.23	□□□□□ -1.73
TUBD1-208	ENST00000588009	EPHX2	P34913	555 aa		4.23	□□□□□ -1.73
TUBD1-208	ENST00000588009	LEP	P41159	167 aa		4.23	□□□□□ -1.73
TUBD1-208	ENST00000588009	MAGEA9	P43362	315 aa		4.23	□□□□□ -1.73
TUBD1-208	ENST00000588009	CDK16	Q00536	496 aa		4.23	□□□□□ -1.73
TUBD1-208	ENST00000588009	ENPEP	Q07075	957 aa		4.23	□□□□□ -1.73
TUBD1-208	ENST00000588009	RUNX3	Q13761	415 aa		4.23	□□□□□ -1.73
TUBD1-208	ENST00000588009	GLYR1	Q49A26	553 aa	Predicted RBP	4.23	□□□□□ -1.73
TUBD1-208	ENST00000588009	CEP85L	Q5SZL2	805 aa		4.23	□□□□□ -1.73
TUBD1-208	ENST00000588009	RNASEK	Q6P5S7	137 aa	Known RBP	4.23	□□□□□ -1.73
TUBD1-208	ENST00000588009	SPATA4	Q8NEY3	305 aa		4.23	□□□□□ -1.73
TUBD1-208	ENST00000588009	OR2L3	Q8NG85	312 aa		4.23	□□□□□ -1.73
TUBD1-208	ENST00000588009	OR1L6	Q8NGR2	347 aa		4.23	□□□□□ -1.73
TUBD1-208	ENST00000588009	PAQR8	Q8TEZ7	354 aa		4.23	□□□□□ -1.73
TUBD1-208	ENST00000588009	CLCC1	Q96S66	551 aa		4.23	□□□□□ -1.73
TUBD1-208	ENST00000588009	FMO2	Q99518	471 aa		4.23	□□□□□ -1.73
TUBD1-208	ENST00000588009	CHIA	Q9BZP6	476 aa		4.23	□□□□□ -1.73
TUBD1-208	ENST00000588009	ANKRD19P	Q9H560	264 aa		4.23	□□□□□ -1.73
TUBD1-208	ENST00000588009	AZI2	Q9H6S1	392 aa		4.23	□□□□□ -1.73
TUBD1-208	ENST00000588009	NHEJ1	Q9H9Q4	299 aa	Predicted RBP	4.23	□□□□□ -1.73
TUBD1-208	ENST00000588009	MIEF1	Q9NQG6	463 aa		4.23	□□□□□ -1.73
TUBD1-208	ENST00000588009	CUTC	Q9NTM9	273 aa		4.23	□□□□□ -1.73
TUBD1-208	ENST00000588009	KLHL28	Q9NXS3	571 aa		4.23	□□□□□ -1.73
TUBD1-208	ENST00000588009	CLEC5A	Q9NY25	188 aa		4.23	□□□□□ -1.73
TUBD1-208	ENST00000588009	SLC7A8	Q9UHI5	535 aa		4.23	□□□□□ -1.73
TUBD1-208	ENST00000588009	KLK13	Q9UKR3	277 aa		4.23	□□□□□ -1.73
TUBD1-208	ENST00000588009	ABCG2	Q9UNQ0	655 aa		4.23	□□□□□ -1.73
TUBD1-208	ENST00000588009	PRSS21	Q9Y6M0	314 aa		4.23	□□□□□ -1.73
TUBD1-208	ENST00000588009	TNIK	Q9UKE5	1360 aa		4.23	□□□□□ -1.73
TUBD1-208	ENST00000588009	SYNM	O15061	1565 aa		4.23	□□□□□ -1.73
TUBD1-208	ENST00000588009	EFCAB5	A4FU69	1503 aa		4.22	□□□□□ -1.73
TUBD1-208	ENST00000588009		A0A1B0GUS0	222 aa		4.22	□□□□□ -1.73
TUBD1-208	ENST00000588009	FRG2C	A6NGY1	282 aa		4.22	□□□□□ -1.73
TUBD1-208	ENST00000588009	KRTAP16-1	A8MUX0	517 aa		4.22	□□□□□ -1.73
TUBD1-208	ENST00000588009	IDS	B3KWA1	339 aa		4.22	□□□□□ -1.73
TUBD1-208	ENST00000588009	CDX4	O14627	284 aa	Predicted RBP	4.22	□□□□□ -1.73
TUBD1-208	ENST00000588009	RNF13	O43567	381 aa		4.22	□□□□□ -1.73
TUBD1-208	ENST00000588009	CST1	P01037	141 aa		4.22	□□□□□ -1.73
TUBD1-208	ENST00000588009	LGALS2	P05162	132 aa		4.22	□□□□□ -1.73
TUBD1-208	ENST00000588009	ZNF853	P0CG23	659 aa		4.22	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms