RNA–Protein interactions for RNA: ENST00000587818.1

TRAPPC6A-203, Transcript of trafficking protein particle complex 6A, humanhuman

TSL 2

Gene TRAPPC6A, Length 433 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6A-203ENST00000587818 LRIF1Q5T3J3 769 aa17.75■□□□□ 0.43
TRAPPC6A-203ENST00000587818 ZNF440Q8IYI8 595 aa17.75■□□□□ 0.43
TRAPPC6A-203ENST00000587818 NFKBIDQ8NI38 313 aa17.75■□□□□ 0.43
TRAPPC6A-203ENST00000587818 DDIT4LQ96D03 193 aa17.75■□□□□ 0.43
TRAPPC6A-203ENST00000587818 ZHX1-C8orf76Q96EF9 292 aa17.75■□□□□ 0.43
TRAPPC6A-203ENST00000587818 ALPK1Q96QP1 1244 aa17.75■□□□□ 0.43
TRAPPC6A-203ENST00000587818 TACO1Q9BSH4 297 aaKnown RBP17.75■□□□□ 0.43
TRAPPC6A-203ENST00000587818 TMUB1Q9BVT8 246 aa17.75■□□□□ 0.43
TRAPPC6A-203ENST00000587818 SPATA9Q9BWV2 254 aa17.75■□□□□ 0.43
TRAPPC6A-203ENST00000587818 HDHD5Q9BXW7 423 aa17.75■□□□□ 0.43
TRAPPC6A-203ENST00000587818 RAD21L1Q9H4I0 556 aa17.75■□□□□ 0.43
TRAPPC6A-203ENST00000587818 IKZF5Q9H5V7 419 aa17.75■□□□□ 0.43
TRAPPC6A-203ENST00000587818 NPHS2Q9NP85 383 aa17.75■□□□□ 0.43
TRAPPC6A-203ENST00000587818 A4GALTQ9NPC4 353 aa17.75■□□□□ 0.43
TRAPPC6A-203ENST00000587818 DSCAMO60469 2012 aa17.75■□□□□ 0.43
TRAPPC6A-203ENST00000587818 C5orf58C9J3I9 102 aa17.74■□□□□ 0.43
TRAPPC6A-203ENST00000587818 FAAHO00519 579 aa17.74■□□□□ 0.43
TRAPPC6A-203ENST00000587818 LYZL6O75951 148 aa17.74■□□□□ 0.43
TRAPPC6A-203ENST00000587818 PGM3O95394 542 aa17.74■□□□□ 0.43
TRAPPC6A-203ENST00000587818 CXCR1P25024 350 aa17.74■□□□□ 0.43
TRAPPC6A-203ENST00000587818 ATP4BP51164 291 aa17.74■□□□□ 0.43
TRAPPC6A-203ENST00000587818 ADAM8P78325 824 aa17.74■□□□□ 0.43
TRAPPC6A-203ENST00000587818 SF3A3Q12874 501 aaKnown RBP eCLIP17.74■□□□□ 0.43
TRAPPC6A-203ENST00000587818 TAB1Q15750 504 aa17.74■□□□□ 0.43
TRAPPC6A-203ENST00000587818 ABLIM2Q6H8Q1 611 aa17.74■□□□□ 0.43
TRAPPC6A-203ENST00000587818 BHLHA15Q7RTS1 189 aaPredicted RBP17.74■□□□□ 0.43
TRAPPC6A-203ENST00000587818 SERPINA11Q86U17 422 aa17.74■□□□□ 0.43
TRAPPC6A-203ENST00000587818 KISS1RQ969F8 398 aaPredicted RBP17.74■□□□□ 0.43
TRAPPC6A-203ENST00000587818 THUMPD1Q9NXG2 353 aaKnown RBP17.74■□□□□ 0.43
TRAPPC6A-203ENST00000587818 TRAPPC4Q9Y296 219 aa17.74■□□□□ 0.43
TRAPPC6A-203ENST00000587818 NOSIPQ9Y314 301 aaKnown RBP17.74■□□□□ 0.43
TRAPPC6A-203ENST00000587818 ZNF208O43345 1280 aa17.73■□□□□ 0.43
TRAPPC6A-203ENST00000587818 EDF1O60869 148 aaKnown RBP17.73■□□□□ 0.43
TRAPPC6A-203ENST00000587818 THBS1P07996 1170 aa17.73■□□□□ 0.43
TRAPPC6A-203ENST00000587818 BMP2P12643 396 aa17.73■□□□□ 0.43
TRAPPC6A-203ENST00000587818 UQCRBP14927 111 aa17.73■□□□□ 0.43
TRAPPC6A-203ENST00000587818 FKBP2P26885 142 aaKnown RBP17.73■□□□□ 0.43
TRAPPC6A-203ENST00000587818 SLC35A1P78382 337 aa17.73■□□□□ 0.43
TRAPPC6A-203ENST00000587818 FOXD4Q12950 439 aaPredicted RBP17.73■□□□□ 0.43
TRAPPC6A-203ENST00000587818 FADDQ13158 208 aa17.73■□□□□ 0.43
TRAPPC6A-203ENST00000587818 ITGADQ13349 1161 aa17.73■□□□□ 0.43
TRAPPC6A-203ENST00000587818 CEACAM7Q14002 265 aa17.73■□□□□ 0.43
TRAPPC6A-203ENST00000587818 CAPRIN1Q14444 709 aaKnown RBP17.73■□□□□ 0.43
TRAPPC6A-203ENST00000587818 P2RY6Q15077 328 aa17.73■□□□□ 0.43
TRAPPC6A-203ENST00000587818 GCNT6Q5T4J0 391 aa17.73■□□□□ 0.43
TRAPPC6A-203ENST00000587818 WBP2NLQ6ICG8 309 aa17.73■□□□□ 0.43
TRAPPC6A-203ENST00000587818 ATG4DQ86TL0 474 aaPredicted RBP17.73■□□□□ 0.43
TRAPPC6A-203ENST00000587818 OR10A4Q9H209 315 aa17.73■□□□□ 0.43
TRAPPC6A-203ENST00000587818 BCL2L10Q9HD36 194 aa17.73■□□□□ 0.43
TRAPPC6A-203ENST00000587818 NIPSNAP3AQ9UFN0 247 aaPredicted RBP17.73■□□□□ 0.43
TRAPPC6A-203ENST00000587818 IFT52Q9Y366 437 aa17.73■□□□□ 0.43
TRAPPC6A-203ENST00000587818 IGKV3D-15A0A087WSY6 115 aa17.72■□□□□ 0.43
TRAPPC6A-203ENST00000587818 TRBV5-3A0A0A0MS03 114 aa17.72■□□□□ 0.43
TRAPPC6A-203ENST00000587818 A0A1W2PP18 115 aa17.72■□□□□ 0.43
TRAPPC6A-203ENST00000587818 ARAFP10398 606 aa17.72■□□□□ 0.43
TRAPPC6A-203ENST00000587818 IGHV1-2P23083 117 aa17.72■□□□□ 0.43
TRAPPC6A-203ENST00000587818 COPZ1P61923 177 aa17.72■□□□□ 0.43
TRAPPC6A-203ENST00000587818 H3F3AP84243 136 aa17.72■□□□□ 0.43
TRAPPC6A-203ENST00000587818 PDK3Q15120 406 aa17.72■□□□□ 0.43
TRAPPC6A-203ENST00000587818 RNF220Q5VTB9 566 aa17.72■□□□□ 0.43
TRAPPC6A-203ENST00000587818 DLEU7Q6UYE1 221 aa17.72■□□□□ 0.43
TRAPPC6A-203ENST00000587818 ZNF704Q6ZNC4 412 aaPredicted RBP17.72■□□□□ 0.43
TRAPPC6A-203ENST00000587818 Q6ZT83 130 aa17.72■□□□□ 0.43
TRAPPC6A-203ENST00000587818 UBE2J2Q8N2K1 259 aa17.72■□□□□ 0.43
TRAPPC6A-203ENST00000587818 TMEM99Q8N816 258 aa17.72■□□□□ 0.43
TRAPPC6A-203ENST00000587818 WFDC11Q8NEX6 87 aa17.72■□□□□ 0.43
TRAPPC6A-203ENST00000587818 BBS10Q8TAM1 723 aa17.72■□□□□ 0.43
TRAPPC6A-203ENST00000587818 PIGXQ8TBF5 258 aa17.72■□□□□ 0.43
TRAPPC6A-203ENST00000587818 NAA11Q9BSU3 229 aaPredicted RBP17.72■□□□□ 0.43
TRAPPC6A-203ENST00000587818 PRR14Q9BWN1 585 aa17.72■□□□□ 0.43
TRAPPC6A-203ENST00000587818 CACYBPQ9HB71 228 aaKnown RBP17.72■□□□□ 0.43
TRAPPC6A-203ENST00000587818 BEX4Q9NWD9 120 aaPredicted RBP17.72■□□□□ 0.43
TRAPPC6A-203ENST00000587818 A0A0G2JND7 137 aa17.71■□□□□ 0.43
TRAPPC6A-203ENST00000587818 TPST1O60507 370 aa17.71■□□□□ 0.43
TRAPPC6A-203ENST00000587818 AKR7A3O95154 331 aa17.71■□□□□ 0.43
TRAPPC6A-203ENST00000587818 ADSLP30566 484 aaPredicted RBP17.71■□□□□ 0.43
TRAPPC6A-203ENST00000587818 FOXG1P55316 489 aaPredicted RBP17.71■□□□□ 0.43
TRAPPC6A-203ENST00000587818 NKX6-1P78426 367 aaPredicted RBP17.71■□□□□ 0.43
TRAPPC6A-203ENST00000587818 CDK6Q00534 326 aa17.71■□□□□ 0.43
TRAPPC6A-203ENST00000587818 OR7A5Q15622 319 aa17.71■□□□□ 0.43
TRAPPC6A-203ENST00000587818 STK11Q15831 433 aa17.71■□□□□ 0.43
TRAPPC6A-203ENST00000587818 COMTD1Q86VU5 262 aa17.71■□□□□ 0.43
TRAPPC6A-203ENST00000587818 HSD17B8Q92506 261 aa17.71■□□□□ 0.43
TRAPPC6A-203ENST00000587818 POTEKPQ9BYX7 375 aa17.71■□□□□ 0.43
TRAPPC6A-203ENST00000587818 EMC3Q9P0I2 261 aa17.71■□□□□ 0.43
TRAPPC6A-203ENST00000587818 ARID1AO14497 2285 aa17.7■□□□□ 0.42
TRAPPC6A-203ENST00000587818 ACANP16112 2415 aa17.7■□□□□ 0.42
TRAPPC6A-203ENST00000587818 LIPT2A6NK58 231 aa17.7■□□□□ 0.42
TRAPPC6A-203ENST00000587818 MRPL33O75394 65 aaKnown RBP17.7■□□□□ 0.42
TRAPPC6A-203ENST00000587818 IDUAP35475 653 aa17.7■□□□□ 0.42
TRAPPC6A-203ENST00000587818 GLIPR1L2Q4G1C9 344 aa17.7■□□□□ 0.42
TRAPPC6A-203ENST00000587818 RUNDC3AQ59EK9 446 aa17.7■□□□□ 0.42
TRAPPC6A-203ENST00000587818 PRAMEF8Q5VWM4 474 aa17.7■□□□□ 0.42
TRAPPC6A-203ENST00000587818 PRAMEF7Q5VXH5 474 aa17.7■□□□□ 0.42
TRAPPC6A-203ENST00000587818 REEP3Q6NUK4 255 aa17.7■□□□□ 0.42
TRAPPC6A-203ENST00000587818 RETREG3Q86VR2 466 aa17.7■□□□□ 0.42
TRAPPC6A-203ENST00000587818 ZNF433Q8N7K0 673 aaPredicted RBP17.7■□□□□ 0.42
TRAPPC6A-203ENST00000587818 NEUROG1Q92886 237 aa17.7■□□□□ 0.42
TRAPPC6A-203ENST00000587818 APH1AQ96BI3 265 aa17.7■□□□□ 0.42
TRAPPC6A-203ENST00000587818 C3orf49Q96BT1 292 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms