RNA–Protein interactions for RNA: ENST00000586892.1

SMARCA4-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 4

Gene SMARCA4, Length 559 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-210ENST00000586892 TRAPPC4Q9Y296 219 aa11.86□□□□□ -0.51
SMARCA4-210ENST00000586892 PDZD2O15018 2839 aa11.85□□□□□ -0.51
SMARCA4-210ENST00000586892 SPG11Q96JI7 2443 aa11.85□□□□□ -0.51
SMARCA4-210ENST00000586892 IGHV3-15A0A0B4J1V0 119 aa11.85□□□□□ -0.51
SMARCA4-210ENST00000586892 TMEM72A0PK05 275 aa11.85□□□□□ -0.51
SMARCA4-210ENST00000586892 FRS3O43559 492 aa11.85□□□□□ -0.51
SMARCA4-210ENST00000586892 MFN2O95140 757 aa11.85□□□□□ -0.51
SMARCA4-210ENST00000586892 EPXP11678 715 aa11.85□□□□□ -0.51
SMARCA4-210ENST00000586892 POU2F1P14859 743 aa11.85□□□□□ -0.51
SMARCA4-210ENST00000586892 CCNA2P20248 432 aa11.85□□□□□ -0.51
SMARCA4-210ENST00000586892 PCGF2P35227 344 aa11.85□□□□□ -0.51
SMARCA4-210ENST00000586892 KCNJ5P48544 419 aa11.85□□□□□ -0.51
SMARCA4-210ENST00000586892 SEC24CP53992 1094 aa11.85□□□□□ -0.51
SMARCA4-210ENST00000586892 FAM27E3Q08E93 113 aa11.85□□□□□ -0.51
SMARCA4-210ENST00000586892 RASGEF1BQ0VAM2 473 aa11.85□□□□□ -0.51
SMARCA4-210ENST00000586892 RABL3Q5HYI8 236 aa11.85□□□□□ -0.51
SMARCA4-210ENST00000586892 INTS11Q5TA45 600 aaKnown RBP11.85□□□□□ -0.51
SMARCA4-210ENST00000586892 BEND4Q6ZU67 534 aa11.85□□□□□ -0.51
SMARCA4-210ENST00000586892 PATL1Q86TB9 770 aaKnown RBP11.85□□□□□ -0.51
SMARCA4-210ENST00000586892 TUSC5Q8IXB3 177 aa11.85□□□□□ -0.51
SMARCA4-210ENST00000586892 LSMEM1Q8N8F7 131 aa11.85□□□□□ -0.51
SMARCA4-210ENST00000586892 C3orf49Q96BT1 292 aa11.85□□□□□ -0.51
SMARCA4-210ENST00000586892 LURAP1Q96LR2 239 aa11.85□□□□□ -0.51
SMARCA4-210ENST00000586892 DACH2Q96NX9 599 aa11.85□□□□□ -0.51
SMARCA4-210ENST00000586892 ELAC2Q9BQ52 826 aaKnown RBP11.85□□□□□ -0.51
SMARCA4-210ENST00000586892 ECSITQ9BQ95 431 aa11.85□□□□□ -0.51
SMARCA4-210ENST00000586892 PSD2Q9BQI7 771 aa11.85□□□□□ -0.51
SMARCA4-210ENST00000586892 RSPO3Q9BXY4 272 aaPredicted RBP11.85□□□□□ -0.51
SMARCA4-210ENST00000586892 NDRG3Q9UGV2 375 aa11.85□□□□□ -0.51
SMARCA4-210ENST00000586892 SLC13A4Q9UKG4 626 aa11.85□□□□□ -0.51
SMARCA4-210ENST00000586892 ABCA4P78363 2273 aa11.85□□□□□ -0.51
SMARCA4-210ENST00000586892 FREM1Q5H8C1 2179 aa11.85□□□□□ -0.51
SMARCA4-210ENST00000586892 HRNRQ86YZ3 2850 aaPredicted RBP11.85□□□□□ -0.51
SMARCA4-210ENST00000586892 SH3D21A4FU49 640 aa11.84□□□□□ -0.51
SMARCA4-210ENST00000586892 GMNCA6NCL1 334 aa11.84□□□□□ -0.51
SMARCA4-210ENST00000586892 ZNF724A8MTY0 619 aa11.84□□□□□ -0.51
SMARCA4-210ENST00000586892 A8MVM7 634 aa11.84□□□□□ -0.51
SMARCA4-210ENST00000586892 C16orf97H3BN30 126 aa11.84□□□□□ -0.51
SMARCA4-210ENST00000586892 SNX3O60493 162 aa11.84□□□□□ -0.51
SMARCA4-210ENST00000586892 TPST1O60507 370 aa11.84□□□□□ -0.51
SMARCA4-210ENST00000586892 EIF1BO60739 113 aaKnown RBP11.84□□□□□ -0.51
SMARCA4-210ENST00000586892 GOSR1O95249 250 aa11.84□□□□□ -0.51
SMARCA4-210ENST00000586892 UGT2B10P36537 528 aa11.84□□□□□ -0.51
SMARCA4-210ENST00000586892 GZMMP51124 257 aa11.84□□□□□ -0.51
SMARCA4-210ENST00000586892 NCALDP61601 193 aa11.84□□□□□ -0.51
SMARCA4-210ENST00000586892 SLC35A1P78382 337 aa11.84□□□□□ -0.51
SMARCA4-210ENST00000586892 DAZAP2Q15038 168 aaPredicted RBP11.84□□□□□ -0.51
SMARCA4-210ENST00000586892 PDK3Q15120 406 aa11.84□□□□□ -0.51
SMARCA4-210ENST00000586892 VMACQ2NL98 169 aa11.84□□□□□ -0.51
SMARCA4-210ENST00000586892 GLIPR1L2Q4G1C9 344 aa11.84□□□□□ -0.51
SMARCA4-210ENST00000586892 ABLIM2Q6H8Q1 611 aa11.84□□□□□ -0.51
SMARCA4-210ENST00000586892 CPLX4Q7Z7G2 160 aa11.84□□□□□ -0.51
SMARCA4-210ENST00000586892 LINC01560Q8TB33 94 aa11.84□□□□□ -0.51
SMARCA4-210ENST00000586892 PIGXQ8TBF5 258 aa11.84□□□□□ -0.51
SMARCA4-210ENST00000586892 RCN3Q96D15 328 aa11.84□□□□□ -0.51
SMARCA4-210ENST00000586892 POTEKPQ9BYX7 375 aa11.84□□□□□ -0.51
SMARCA4-210ENST00000586892 TRIM2Q9C040 744 aa11.84□□□□□ -0.51
SMARCA4-210ENST00000586892 FAM107BQ9H098 131 aa11.84□□□□□ -0.51
SMARCA4-210ENST00000586892 C12orf49Q9H741 205 aa11.84□□□□□ -0.51
SMARCA4-210ENST00000586892 C12orf10Q9HB07 376 aa11.84□□□□□ -0.51
SMARCA4-210ENST00000586892 EMC3Q9P0I2 261 aa11.84□□□□□ -0.51
SMARCA4-210ENST00000586892 RPS6KB2Q9UBS0 482 aa11.84□□□□□ -0.51
SMARCA4-210ENST00000586892 TESQ9UGI8 421 aaKnown RBP11.84□□□□□ -0.51
SMARCA4-210ENST00000586892 ING1Q9UK53 422 aaPredicted RBP11.84□□□□□ -0.51
SMARCA4-210ENST00000586892 MYO9AB2RTY4 2548 aa11.84□□□□□ -0.51
SMARCA4-210ENST00000586892 IGKV3D-15A0A087WSY6 115 aa11.83□□□□□ -0.52
SMARCA4-210ENST00000586892 ZC3H12DA2A288 527 aaKnown RBP11.83□□□□□ -0.52
SMARCA4-210ENST00000586892 A6NNC1 897 aa11.83□□□□□ -0.52
SMARCA4-210ENST00000586892 M0QX08 132 aa11.83□□□□□ -0.52
SMARCA4-210ENST00000586892 GCM2O75603 506 aaPredicted RBP11.83□□□□□ -0.52
SMARCA4-210ENST00000586892 CTAG2O75638 210 aa11.83□□□□□ -0.52
SMARCA4-210ENST00000586892 GPIP06744 558 aa11.83□□□□□ -0.52
SMARCA4-210ENST00000586892 C8BP07358 591 aa11.83□□□□□ -0.52
SMARCA4-210ENST00000586892 COX4I1P13073 169 aa11.83□□□□□ -0.52
SMARCA4-210ENST00000586892 DRD4P21917 467 aa11.83□□□□□ -0.52
SMARCA4-210ENST00000586892 IDUAP35475 653 aa11.83□□□□□ -0.52
SMARCA4-210ENST00000586892 RGS8P57771 180 aaPredicted RBP11.83□□□□□ -0.52
SMARCA4-210ENST00000586892 OR2B6P58173 313 aa11.83□□□□□ -0.52
SMARCA4-210ENST00000586892 H3F3AP84243 136 aa11.83□□□□□ -0.52
SMARCA4-210ENST00000586892 HOXC5Q00444 222 aa11.83□□□□□ -0.52
SMARCA4-210ENST00000586892 DMTNQ08495 405 aa11.83□□□□□ -0.52
SMARCA4-210ENST00000586892 EXOC3L2Q2M3D2 409 aa11.83□□□□□ -0.52
SMARCA4-210ENST00000586892 ERICH5Q6P6B1 374 aa11.83□□□□□ -0.52
SMARCA4-210ENST00000586892 C6orf89Q6UWU4 347 aa11.83□□□□□ -0.52
SMARCA4-210ENST00000586892 NUFIP2Q7Z417 695 aaKnown RBP11.83□□□□□ -0.52
SMARCA4-210ENST00000586892 ARPINQ7Z6K5 226 aa11.83□□□□□ -0.52
SMARCA4-210ENST00000586892 ATG4DQ86TL0 474 aaPredicted RBP11.83□□□□□ -0.52
SMARCA4-210ENST00000586892 COMTD1Q86VU5 262 aa11.83□□□□□ -0.52
SMARCA4-210ENST00000586892 TMEM200AQ86VY9 491 aa11.83□□□□□ -0.52
SMARCA4-210ENST00000586892 CALHM3Q86XJ0 350 aa11.83□□□□□ -0.52
SMARCA4-210ENST00000586892 POU5F2Q8N7G0 328 aa11.83□□□□□ -0.52
SMARCA4-210ENST00000586892 OR52E4Q8NGH9 312 aa11.83□□□□□ -0.52
SMARCA4-210ENST00000586892 DNAJA4Q8WW22 397 aaPredicted RBP11.83□□□□□ -0.52
SMARCA4-210ENST00000586892 RASSF5Q8WWW0 418 aa11.83□□□□□ -0.52
SMARCA4-210ENST00000586892 NAA11Q9BSU3 229 aaPredicted RBP11.83□□□□□ -0.52
SMARCA4-210ENST00000586892 PIF1Q9H611 641 aa11.83□□□□□ -0.52
SMARCA4-210ENST00000586892 AP3M1Q9Y2T2 418 aa11.83□□□□□ -0.52
SMARCA4-210ENST00000586892 CCDC168Q8NDH2 2452 aa11.82□□□□□ -0.52
SMARCA4-210ENST00000586892 FAM221AA4D161 298 aa11.82□□□□□ -0.52
SMARCA4-210ENST00000586892 LIPT2A6NK58 231 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms