RNA–Protein interactions for RNA: ENST00000585740.5

LIG3-204, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-204ENST00000585740 CACTIN-AS1Q8N1I8 211 aa10.31□□□□□ -0.76
LIG3-204ENST00000585740 MFSD4AQ8N468 514 aa10.31□□□□□ -0.76
LIG3-204ENST00000585740 EID2Q8N6I1 236 aa10.31□□□□□ -0.76
LIG3-204ENST00000585740 ZNF441Q8N8Z8 693 aa10.31□□□□□ -0.76
LIG3-204ENST00000585740 ZNF485Q8NCK3 441 aa10.31□□□□□ -0.76
LIG3-204ENST00000585740 OR4F15Q8NGB8 312 aa10.31□□□□□ -0.76
LIG3-204ENST00000585740 METTL21AQ8WXB1 218 aa10.31□□□□□ -0.76
LIG3-204ENST00000585740 OMA1Q96E52 524 aa10.31□□□□□ -0.76
LIG3-204ENST00000585740 MRPL48Q96GC5 212 aaKnown RBP10.31□□□□□ -0.76
LIG3-204ENST00000585740 CCDC74BQ96LY2 380 aa10.31□□□□□ -0.76
LIG3-204ENST00000585740 OR6C1Q96RD1 312 aa10.31□□□□□ -0.76
LIG3-204ENST00000585740 GPX7Q96SL4 187 aaPredicted RBP10.31□□□□□ -0.76
LIG3-204ENST00000585740 ADOQ96SZ5 270 aa10.31□□□□□ -0.76
LIG3-204ENST00000585740 SECISBP2Q96T21 854 aaKnown RBP10.31□□□□□ -0.76
LIG3-204ENST00000585740 CDADC1Q9BWV3 514 aa10.31□□□□□ -0.76
LIG3-204ENST00000585740 NUAK2Q9H093 628 aa10.31□□□□□ -0.76
LIG3-204ENST00000585740 OCEL1Q9H607 264 aa10.31□□□□□ -0.76
LIG3-204ENST00000585740 TBCCD1Q9NVR7 557 aa10.31□□□□□ -0.76
LIG3-204ENST00000585740 ASB6Q9NWX5 421 aa10.31□□□□□ -0.76
LIG3-204ENST00000585740 IL20RAQ9UHF4 553 aa10.31□□□□□ -0.76
LIG3-204ENST00000585740 RALYQ9UKM9 306 aaKnown RBP10.31□□□□□ -0.76
LIG3-204ENST00000585740 FBXO4Q9UKT5 387 aa10.31□□□□□ -0.76
LIG3-204ENST00000585740 CDV3Q9UKY7 258 aaKnown RBP10.31□□□□□ -0.76
LIG3-204ENST00000585740 MPDZO75970 2070 aa10.3□□□□□ -0.76
LIG3-204ENST00000585740 BAHCC1Q9P281 2608 aa10.3□□□□□ -0.76
LIG3-204ENST00000585740 TRDV1A0A1B0GX56 115 aa10.3□□□□□ -0.76
LIG3-204ENST00000585740 CCDC182A6NF36 153 aa10.3□□□□□ -0.76
LIG3-204ENST00000585740 OR6C70A6NIJ9 312 aa10.3□□□□□ -0.76
LIG3-204ENST00000585740 J3QRK9 145 aa10.3□□□□□ -0.76
LIG3-204ENST00000585740 IMPA2O14732 288 aa10.3□□□□□ -0.76
LIG3-204ENST00000585740 NDUFB5O43674 189 aa10.3□□□□□ -0.76
LIG3-204ENST00000585740 CDC40O60508 579 aaKnown RBP eCLIP10.3□□□□□ -0.76
LIG3-204ENST00000585740 ICOSLGO75144 302 aa10.3□□□□□ -0.76
LIG3-204ENST00000585740 ALOX12BO75342 701 aa10.3□□□□□ -0.76
LIG3-204ENST00000585740 APOL3O95236 402 aa10.3□□□□□ -0.76
LIG3-204ENST00000585740 ATXN8OSP0DMR3 200 aa10.3□□□□□ -0.76
LIG3-204ENST00000585740 APEHP13798 732 aaKnown RBP10.3□□□□□ -0.76
LIG3-204ENST00000585740 CD53P19397 219 aa10.3□□□□□ -0.76
LIG3-204ENST00000585740 FGF9P31371 208 aaPredicted RBP10.3□□□□□ -0.76
LIG3-204ENST00000585740 CCR4P51679 360 aa10.3□□□□□ -0.76
LIG3-204ENST00000585740 TAS2R43P59537 309 aa10.3□□□□□ -0.76
LIG3-204ENST00000585740 RPS3AP61247 264 aaKnown RBP10.3□□□□□ -0.76
LIG3-204ENST00000585740 RPS7P62081 194 aaKnown RBP10.3□□□□□ -0.76
LIG3-204ENST00000585740 RUNX1T1Q06455 604 aa10.3□□□□□ -0.76
LIG3-204ENST00000585740 TRAM1Q15629 374 aa10.3□□□□□ -0.76
LIG3-204ENST00000585740 CD226Q15762 336 aa10.3□□□□□ -0.76
LIG3-204ENST00000585740 NDUFAF6Q330K2 333 aa10.3□□□□□ -0.76
LIG3-204ENST00000585740 KLHL12Q53G59 568 aa10.3□□□□□ -0.76
LIG3-204ENST00000585740 SLC35D3Q5M8T2 416 aa10.3□□□□□ -0.76
LIG3-204ENST00000585740 SLC35F1Q5T1Q4 408 aa10.3□□□□□ -0.76
LIG3-204ENST00000585740 OR2G6Q5TZ20 316 aa10.3□□□□□ -0.76
LIG3-204ENST00000585740 ZNF322Q6U7Q0 402 aaPredicted RBP10.3□□□□□ -0.76
LIG3-204ENST00000585740 ANKRD37Q7Z713 158 aa10.3□□□□□ -0.76
LIG3-204ENST00000585740 LHFPL3Q86UP9 236 aa10.3□□□□□ -0.76
LIG3-204ENST00000585740 PPP1R3BQ86XI6 285 aa10.3□□□□□ -0.76
LIG3-204ENST00000585740 GPALPP1Q8IXQ4 340 aa10.3□□□□□ -0.76
LIG3-204ENST00000585740 PRSS58Q8IYP2 241 aa10.3□□□□□ -0.76
LIG3-204ENST00000585740 SLC37A3Q8NCC5 494 aa10.3□□□□□ -0.76
LIG3-204ENST00000585740 GALNT6Q8NCL4 622 aa10.3□□□□□ -0.76
LIG3-204ENST00000585740 BBS1Q8NFJ9 593 aa10.3□□□□□ -0.76
LIG3-204ENST00000585740 OR51G2Q8NGK0 314 aa10.3□□□□□ -0.76
LIG3-204ENST00000585740 ZNF563Q8TA94 476 aa10.3□□□□□ -0.76
LIG3-204ENST00000585740 NUBPLQ8TB37 319 aa10.3□□□□□ -0.76
LIG3-204ENST00000585740 IFI44Q8TCB0 444 aa10.3□□□□□ -0.76
LIG3-204ENST00000585740 CHPT1Q8WUD6 406 aa10.3□□□□□ -0.76
LIG3-204ENST00000585740 GATAD2BQ8WXI9 593 aa10.3□□□□□ -0.76
LIG3-204ENST00000585740 NACC2Q96BF6 587 aa10.3□□□□□ -0.76
LIG3-204ENST00000585740 PPP1R14BQ96C90 147 aa10.3□□□□□ -0.76
LIG3-204ENST00000585740 KCTD7Q96MP8 289 aa10.3□□□□□ -0.76
LIG3-204ENST00000585740 ERMAPQ96PL5 475 aaPredicted RBP10.3□□□□□ -0.76
LIG3-204ENST00000585740 GFM1Q96RP9 751 aaKnown RBP10.3□□□□□ -0.76
LIG3-204ENST00000585740 LMF1Q96S06 567 aa10.3□□□□□ -0.76
LIG3-204ENST00000585740 TEAD3Q99594 435 aa10.3□□□□□ -0.76
LIG3-204ENST00000585740 MED18Q9BUE0 208 aa10.3□□□□□ -0.76
LIG3-204ENST00000585740 TBL1XR1Q9BZK7 514 aa10.3□□□□□ -0.76
LIG3-204ENST00000585740 SEMA4CQ9C0C4 833 aa10.3□□□□□ -0.76
LIG3-204ENST00000585740 C6orf62Q9GZU0 229 aaPredicted RBP10.3□□□□□ -0.76
LIG3-204ENST00000585740 SYNDIG1Q9H7V2 258 aa10.3□□□□□ -0.76
LIG3-204ENST00000585740 SLC22A11Q9NSA0 550 aa10.3□□□□□ -0.76
LIG3-204ENST00000585740 WDR70Q9NW82 654 aa10.3□□□□□ -0.76
LIG3-204ENST00000585740 CTSFQ9UBX1 484 aa10.3□□□□□ -0.76
LIG3-204ENST00000585740 C19orf25Q9UFG5 118 aaPredicted RBP10.3□□□□□ -0.76
LIG3-204ENST00000585740 CHRNA9Q9UGM1 479 aa10.3□□□□□ -0.76
LIG3-204ENST00000585740 PPIEQ9UNP9 301 aaKnown RBP10.3□□□□□ -0.76
LIG3-204ENST00000585740 SF3B6Q9Y3B4 125 aaKnown RBP10.3□□□□□ -0.76
LIG3-204ENST00000585740 PCDHGB7Q9Y5F8 929 aa10.3□□□□□ -0.76
LIG3-204ENST00000585740 CORINQ9Y5Q5 1042 aa10.3□□□□□ -0.76
LIG3-204ENST00000585740 EXPH5Q8NEV8 1989 aa10.3□□□□□ -0.76
LIG3-204ENST00000585740 CHD8Q9HCK8 2581 aa10.29□□□□□ -0.76
LIG3-204ENST00000585740 DAPL1A0PJW8 107 aa10.29□□□□□ -0.76
LIG3-204ENST00000585740 FAM183AA6NL82 134 aa10.29□□□□□ -0.76
LIG3-204ENST00000585740 VSTM2BA6NLU5 285 aa10.29□□□□□ -0.76
LIG3-204ENST00000585740 C12orf71A8MTZ7 269 aa10.29□□□□□ -0.76
LIG3-204ENST00000585740 LOC110117498-PIK3R3F6TDL0 507 aa10.29□□□□□ -0.76
LIG3-204ENST00000585740 CBFA2T3O75081 653 aa10.29□□□□□ -0.76
LIG3-204ENST00000585740 HLA-DPB1P04440 258 aa10.29□□□□□ -0.76
LIG3-204ENST00000585740 ADRB1P08588 477 aa10.29□□□□□ -0.76
LIG3-204ENST00000585740 FGF5P12034 268 aa10.29□□□□□ -0.76
LIG3-204ENST00000585740 GP1BBP13224 206 aa10.29□□□□□ -0.76
LIG3-204ENST00000585740 NAGAP17050 411 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms