RNA–Protein interactions for RNA: ENST00000585042.5

VAPA-209, Transcript of VAMP associated protein A, humanhuman

TSL 4

Gene VAPA, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-209ENST00000585042 DPY30Q9C005 99 aa13.21□□□□□ -0.29
VAPA-209ENST00000585042 AKTIPQ9H8T0 292 aa13.21□□□□□ -0.29
VAPA-209ENST00000585042 TMEM160Q9NX00 188 aa13.21□□□□□ -0.29
VAPA-209ENST00000585042 TMEM181Q9P2C4 612 aa13.21□□□□□ -0.29
VAPA-209ENST00000585042 DCTN4Q9UJW0 460 aa13.21□□□□□ -0.29
VAPA-209ENST00000585042 CENPVL1A0A0U1RR11 272 aa13.2□□□□□ -0.3
VAPA-209ENST00000585042 WDR91A4D1P6 747 aa13.2□□□□□ -0.3
VAPA-209ENST00000585042 H7C417 338 aa13.2□□□□□ -0.3
VAPA-209ENST00000585042 FAAHO00519 579 aa13.2□□□□□ -0.3
VAPA-209ENST00000585042 ZNF208O43345 1280 aa13.2□□□□□ -0.3
VAPA-209ENST00000585042 RAD51DO75771 328 aa13.2□□□□□ -0.3
VAPA-209ENST00000585042 PAX7P23759 505 aa13.2□□□□□ -0.3
VAPA-209ENST00000585042 NUDT6P53370 316 aa13.2□□□□□ -0.3
VAPA-209ENST00000585042 CLNS1AP54105 237 aaKnown RBP13.2□□□□□ -0.3
VAPA-209ENST00000585042 SLC35A1P78382 337 aa13.2□□□□□ -0.3
VAPA-209ENST00000585042 IRX1P78414 480 aaPredicted RBP13.2□□□□□ -0.3
VAPA-209ENST00000585042 TGFBR3Q03167 851 aa13.2□□□□□ -0.3
VAPA-209ENST00000585042 GABRA6Q16445 453 aa13.2□□□□□ -0.3
VAPA-209ENST00000585042 CHRFAM7AQ494W8 412 aa13.2□□□□□ -0.3
VAPA-209ENST00000585042 CLEC2AQ6UVW9 174 aa13.2□□□□□ -0.3
VAPA-209ENST00000585042 FRRS1Q6ZNA5 592 aa13.2□□□□□ -0.3
VAPA-209ENST00000585042 MUC15Q8N387 334 aa13.2□□□□□ -0.3
VAPA-209ENST00000585042 GOLGA6L1Q8N7Z2 621 aa13.2□□□□□ -0.3
VAPA-209ENST00000585042 C1orf162Q8NEQ5 155 aaPredicted RBP13.2□□□□□ -0.3
VAPA-209ENST00000585042 DDIT4LQ96D03 193 aa13.2□□□□□ -0.3
VAPA-209ENST00000585042 BOD1Q96IK1 185 aa13.2□□□□□ -0.3
VAPA-209ENST00000585042 ARL5BQ96KC2 179 aa13.2□□□□□ -0.3
VAPA-209ENST00000585042 TNFRSF13CQ96RJ3 184 aa13.2□□□□□ -0.3
VAPA-209ENST00000585042 PAIP2Q9BPZ3 127 aaKnown RBP13.2□□□□□ -0.3
VAPA-209ENST00000585042 NAA11Q9BSU3 229 aaPredicted RBP13.2□□□□□ -0.3
VAPA-209ENST00000585042 CACNG6Q9BXT2 260 aa13.2□□□□□ -0.3
VAPA-209ENST00000585042 AMBRA1Q9C0C7 1298 aa13.2□□□□□ -0.3
VAPA-209ENST00000585042 PIF1Q9H611 641 aa13.2□□□□□ -0.3
VAPA-209ENST00000585042 NKIRAS1Q9NYS0 192 aa13.2□□□□□ -0.3
VAPA-209ENST00000585042 POU2F3Q9UKI9 436 aa13.2□□□□□ -0.3
VAPA-209ENST00000585042 A0A096LNT2 108 aa13.19□□□□□ -0.3
VAPA-209ENST00000585042 PDLIM1O00151 329 aa13.19□□□□□ -0.3
VAPA-209ENST00000585042 SERPINE1P05121 402 aa13.19□□□□□ -0.3
VAPA-209ENST00000585042 SLC25A16P16260 332 aa13.19□□□□□ -0.3
VAPA-209ENST00000585042 NTF4P34130 210 aa13.19□□□□□ -0.3
VAPA-209ENST00000585042 KHKP50053 298 aa13.19□□□□□ -0.3
VAPA-209ENST00000585042 ANXA11P50995 505 aaKnown RBP13.19□□□□□ -0.3
VAPA-209ENST00000585042 FABP6P51161 128 aa13.19□□□□□ -0.3
VAPA-209ENST00000585042 PHC1P78364 1004 aa13.19□□□□□ -0.3
VAPA-209ENST00000585042 CHRNB3Q05901 458 aa13.19□□□□□ -0.3
VAPA-209ENST00000585042 LRRC74AQ0VAA2 488 aa13.19□□□□□ -0.3
VAPA-209ENST00000585042 CHI3L2Q15782 390 aa13.19□□□□□ -0.3
VAPA-209ENST00000585042 HDXQ7Z353 690 aa13.19□□□□□ -0.3
VAPA-209ENST00000585042 CLEC4FQ8N1N0 589 aa13.19□□□□□ -0.3
VAPA-209ENST00000585042 OR52N5Q8NH56 324 aa13.19□□□□□ -0.3
VAPA-209ENST00000585042 TMEM158Q8WZ71 300 aa13.19□□□□□ -0.3
VAPA-209ENST00000585042 ZG16BQ96DA0 208 aa13.19□□□□□ -0.3
VAPA-209ENST00000585042 TRNT1Q96Q11 434 aaKnown RBP13.19□□□□□ -0.3
VAPA-209ENST00000585042 INPP5KQ9BT40 448 aa13.19□□□□□ -0.3
VAPA-209ENST00000585042 MTHFD2LQ9H903 347 aaPredicted RBP13.19□□□□□ -0.3
VAPA-209ENST00000585042 FKRPQ9H9S5 495 aa13.19□□□□□ -0.3
VAPA-209ENST00000585042 TMBIM4Q9HC24 238 aa13.19□□□□□ -0.3
VAPA-209ENST00000585042 BTNL2Q9UIR0 455 aa13.19□□□□□ -0.3
VAPA-209ENST00000585042 CDC42EP3Q9UKI2 254 aa13.19□□□□□ -0.3
VAPA-209ENST00000585042 SLC9A8Q9Y2E8 581 aa13.19□□□□□ -0.3
VAPA-209ENST00000585042 AMDHD2Q9Y303 409 aa13.19□□□□□ -0.3
VAPA-209ENST00000585042 RAP2CQ9Y3L5 183 aa13.19□□□□□ -0.3
VAPA-209ENST00000585042 PLCE1Q9P212 2302 aa13.19□□□□□ -0.3
VAPA-209ENST00000585042 STAB1Q9NY15 2570 aa13.18□□□□□ -0.3
VAPA-209ENST00000585042 IGHV4-30-2A0A087WSY4 118 aa13.18□□□□□ -0.3
VAPA-209ENST00000585042 FAM234BA2RU67 622 aa13.18□□□□□ -0.3
VAPA-209ENST00000585042 CPSF4O95639 269 aaKnown RBP13.18□□□□□ -0.3
VAPA-209ENST00000585042 IGHV3-9P01782 118 aa13.18□□□□□ -0.3
VAPA-209ENST00000585042 CSF3P09919 207 aa13.18□□□□□ -0.3
VAPA-209ENST00000585042 RYKP34925 604 aa13.18□□□□□ -0.3
VAPA-209ENST00000585042 IDH2P48735 452 aaKnown RBP13.18□□□□□ -0.3
VAPA-209ENST00000585042 RPL14P50914 215 aaKnown RBP13.18□□□□□ -0.3
VAPA-209ENST00000585042 ZNF83P51522 516 aa13.18□□□□□ -0.3
VAPA-209ENST00000585042 POLR2HP52434 150 aaKnown RBP13.18□□□□□ -0.3
VAPA-209ENST00000585042 SLC18A1P54219 525 aa13.18□□□□□ -0.3
VAPA-209ENST00000585042 CASP9P55211 416 aa13.18□□□□□ -0.3
VAPA-209ENST00000585042 OR2B6P58173 313 aa13.18□□□□□ -0.3
VAPA-209ENST00000585042 ABCE1P61221 599 aaKnown RBP13.18□□□□□ -0.3
VAPA-209ENST00000585042 MAGOHP61326 146 aaKnown RBP13.18□□□□□ -0.3
VAPA-209ENST00000585042 HPCAP84074 193 aa13.18□□□□□ -0.3
VAPA-209ENST00000585042 VLDLRP98155 873 aa13.18□□□□□ -0.3
VAPA-209ENST00000585042 CHRNEQ04844 493 aa13.18□□□□□ -0.3
VAPA-209ENST00000585042 GNA13Q14344 377 aa13.18□□□□□ -0.3
VAPA-209ENST00000585042 GSTA3Q16772 222 aa13.18□□□□□ -0.3
VAPA-209ENST00000585042 GPAT3Q53EU6 434 aa13.18□□□□□ -0.3
VAPA-209ENST00000585042 TNFAIP8L2Q6P589 184 aaPredicted RBP13.18□□□□□ -0.3
VAPA-209ENST00000585042 CCDC103Q8IW40 242 aa13.18□□□□□ -0.3
VAPA-209ENST00000585042 TRIML2Q8N7C3 387 aa13.18□□□□□ -0.3
VAPA-209ENST00000585042 ANKRD42Q8N9B4 389 aa13.18□□□□□ -0.3
VAPA-209ENST00000585042 PROX1Q92786 737 aa13.18□□□□□ -0.3
VAPA-209ENST00000585042 RAB8BQ92930 207 aa13.18□□□□□ -0.3
VAPA-209ENST00000585042 ZBTB9Q96C00 473 aa13.18□□□□□ -0.3
VAPA-209ENST00000585042 UPB1Q9UBR1 384 aa13.18□□□□□ -0.3
VAPA-209ENST00000585042 MARCOQ9UEW3 520 aaPredicted RBP13.18□□□□□ -0.3
VAPA-209ENST00000585042 HAO1Q9UJM8 370 aa13.18□□□□□ -0.3
VAPA-209ENST00000585042 PMF1-BGLAPU3KQ54 211 aa13.18□□□□□ -0.3
VAPA-209ENST00000585042 ALPK2Q86TB3 2170 aa13.17□□□□□ -0.3
VAPA-209ENST00000585042 TMED7-TICAM2A0A0A6YYA0 188 aa13.17□□□□□ -0.3
VAPA-209ENST00000585042 TMEM120BA0PK00 339 aa13.17□□□□□ -0.3
VAPA-209ENST00000585042 AGAP5A6NIR3 686 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms