RNA–Protein interactions for RNA: ENST00000584112.1

CCDC47-206, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2

Gene CCDC47, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-206ENST00000584112 TMEM171Q8WVE6 324 aa9.85□□□□□ -0.83
CCDC47-206ENST00000584112 HSD17B8Q92506 261 aa9.85□□□□□ -0.83
CCDC47-206ENST00000584112 PMM1Q92871 262 aa9.85□□□□□ -0.83
CCDC47-206ENST00000584112 ZNF524Q96C55 264 aa9.85□□□□□ -0.83
CCDC47-206ENST00000584112 TEX37Q96LM6 180 aa9.85□□□□□ -0.83
CCDC47-206ENST00000584112 TRNT1Q96Q11 434 aaKnown RBP9.85□□□□□ -0.83
CCDC47-206ENST00000584112 CCDC106Q9BWC9 280 aa9.85□□□□□ -0.83
CCDC47-206ENST00000584112 POTEKPQ9BYX7 375 aa9.85□□□□□ -0.83
CCDC47-206ENST00000584112 ESRP2Q9H6T0 727 aaKnown RBP9.85□□□□□ -0.83
CCDC47-206ENST00000584112 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.85□□□□□ -0.83
CCDC47-206ENST00000584112 EMC3Q9P0I2 261 aa9.85□□□□□ -0.83
CCDC47-206ENST00000584112 CHRNA9Q9UGM1 479 aa9.85□□□□□ -0.83
CCDC47-206ENST00000584112 HDGFL3Q9Y3E1 203 aa9.85□□□□□ -0.83
CCDC47-206ENST00000584112 GPR45Q9Y5Y3 372 aa9.85□□□□□ -0.83
CCDC47-206ENST00000584112 GOLGA8QA0A0J9YX86 632 aa9.84□□□□□ -0.83
CCDC47-206ENST00000584112 GOLGA8OA6NCC3 632 aa9.84□□□□□ -0.83
CCDC47-206ENST00000584112 GOLGA8NF8WBI6 632 aa9.84□□□□□ -0.83
CCDC47-206ENST00000584112 HS3ST1O14792 307 aa9.84□□□□□ -0.83
CCDC47-206ENST00000584112 SMAD9O15198 467 aaKnown RBP9.84□□□□□ -0.83
CCDC47-206ENST00000584112 PMS2P2O95744 297 aa9.84□□□□□ -0.83
CCDC47-206ENST00000584112 ADAP00813 363 aa9.84□□□□□ -0.83
CCDC47-206ENST00000584112 IL6P05231 212 aa9.84□□□□□ -0.83
CCDC47-206ENST00000584112 FESP07332 822 aa9.84□□□□□ -0.83
CCDC47-206ENST00000584112 KITP10721 976 aa9.84□□□□□ -0.83
CCDC47-206ENST00000584112 UQCRBP14927 111 aa9.84□□□□□ -0.83
CCDC47-206ENST00000584112 RYKP34925 604 aa9.84□□□□□ -0.83
CCDC47-206ENST00000584112 CHRNEQ04844 493 aa9.84□□□□□ -0.83
CCDC47-206ENST00000584112 GSTA3Q16772 222 aa9.84□□□□□ -0.83
CCDC47-206ENST00000584112 PDCD4Q53EL6 469 aaKnown RBP9.84□□□□□ -0.83
CCDC47-206ENST00000584112 BHLHA15Q7RTS1 189 aaPredicted RBP9.84□□□□□ -0.83
CCDC47-206ENST00000584112 GALNT5Q7Z7M9 940 aa9.84□□□□□ -0.83
CCDC47-206ENST00000584112 ZNF611Q8N823 705 aa9.84□□□□□ -0.83
CCDC47-206ENST00000584112 WDR60Q8WVS4 1066 aa9.84□□□□□ -0.83
CCDC47-206ENST00000584112 ZBTB9Q96C00 473 aa9.84□□□□□ -0.83
CCDC47-206ENST00000584112 TMEM204Q9BSN7 226 aa9.84□□□□□ -0.83
CCDC47-206ENST00000584112 INPP5KQ9BT40 448 aa9.84□□□□□ -0.83
CCDC47-206ENST00000584112 SLC38A1Q9H2H9 487 aa9.84□□□□□ -0.83
CCDC47-206ENST00000584112 CXorf56Q9H5V9 222 aa9.84□□□□□ -0.83
CCDC47-206ENST00000584112 WDR55Q9H6Y2 383 aaPredicted RBP9.84□□□□□ -0.83
CCDC47-206ENST00000584112 ZNF696Q9H7X3 374 aa9.84□□□□□ -0.83
CCDC47-206ENST00000584112 MANSC1Q9H8J5 431 aa9.84□□□□□ -0.83
CCDC47-206ENST00000584112 CTPS2Q9NRF8 586 aa9.84□□□□□ -0.83
CCDC47-206ENST00000584112 PRDM4Q9UKN5 801 aa9.84□□□□□ -0.83
CCDC47-206ENST00000584112 PRAMEF27A3QJZ7 478 aa9.83□□□□□ -0.84
CCDC47-206ENST00000584112 AGAP5A6NIR3 686 aa9.83□□□□□ -0.84
CCDC47-206ENST00000584112 ZNF814B7Z6K7 855 aa9.83□□□□□ -0.84
CCDC47-206ENST00000584112 RFXANKO14593 260 aa9.83□□□□□ -0.84
CCDC47-206ENST00000584112 GPR171O14626 319 aa9.83□□□□□ -0.84
CCDC47-206ENST00000584112 TMPRSS2O15393 492 aa9.83□□□□□ -0.84
CCDC47-206ENST00000584112 SLC22A3O75751 556 aa9.83□□□□□ -0.84
CCDC47-206ENST00000584112 DBIP07108 87 aaKnown RBP9.83□□□□□ -0.84
CCDC47-206ENST00000584112 CD3EP07766 207 aa9.83□□□□□ -0.84
CCDC47-206ENST00000584112 NR2F1P10589 423 aa9.83□□□□□ -0.84
CCDC47-206ENST00000584112 IL7RP16871 459 aa9.83□□□□□ -0.84
CCDC47-206ENST00000584112 IL12AP29459 219 aa9.83□□□□□ -0.84
CCDC47-206ENST00000584112 CDKN2CP42773 168 aa9.83□□□□□ -0.84
CCDC47-206ENST00000584112 MAP2K6P52564 334 aa9.83□□□□□ -0.84
CCDC47-206ENST00000584112 MAGOHP61326 146 aaKnown RBP9.83□□□□□ -0.84
CCDC47-206ENST00000584112 PDK3Q15120 406 aa9.83□□□□□ -0.84
CCDC47-206ENST00000584112 TSC22D1Q15714 1073 aa9.83□□□□□ -0.84
CCDC47-206ENST00000584112 TAB1Q15750 504 aa9.83□□□□□ -0.84
CCDC47-206ENST00000584112 SYPL1Q16563 259 aa9.83□□□□□ -0.84
CCDC47-206ENST00000584112 ABLIM2Q6H8Q1 611 aa9.83□□□□□ -0.84
CCDC47-206ENST00000584112 ALKBH2Q6NS38 261 aa9.83□□□□□ -0.84
CCDC47-206ENST00000584112 TREML4Q6UXN2 200 aa9.83□□□□□ -0.84
CCDC47-206ENST00000584112 MSANTD1Q6ZTZ1 278 aa9.83□□□□□ -0.84
CCDC47-206ENST00000584112 MTDHQ86UE4 582 aaKnown RBP9.83□□□□□ -0.84
CCDC47-206ENST00000584112 PEX5LQ8IYB4 626 aa9.83□□□□□ -0.84
CCDC47-206ENST00000584112 ZNF100Q8IYN0 542 aa9.83□□□□□ -0.84
CCDC47-206ENST00000584112 LRRC17Q8N6Y2 441 aa9.83□□□□□ -0.84
CCDC47-206ENST00000584112 ANKFN1Q8N957 763 aa9.83□□□□□ -0.84
CCDC47-206ENST00000584112 PIGXQ8TBF5 258 aa9.83□□□□□ -0.84
CCDC47-206ENST00000584112 PIWIL2Q8TC59 973 aaKnown RBP9.83□□□□□ -0.84
CCDC47-206ENST00000584112 IGFBPL1Q8WX77 278 aa9.83□□□□□ -0.84
CCDC47-206ENST00000584112 DDIT4LQ96D03 193 aa9.83□□□□□ -0.84
CCDC47-206ENST00000584112 ZG16BQ96DA0 208 aa9.83□□□□□ -0.84
CCDC47-206ENST00000584112 MAELQ96JY0 434 aaKnown RBP9.83□□□□□ -0.84
CCDC47-206ENST00000584112 ZNF300Q96RE9 604 aaPredicted RBP9.83□□□□□ -0.84
CCDC47-206ENST00000584112 RMND5AQ9H871 391 aa9.83□□□□□ -0.84
CCDC47-206ENST00000584112 MTHFD2LQ9H903 347 aaPredicted RBP9.83□□□□□ -0.84
CCDC47-206ENST00000584112 ZNF701Q9NV72 531 aaPredicted RBP9.83□□□□□ -0.84
CCDC47-206ENST00000584112 TMEM160Q9NX00 188 aa9.83□□□□□ -0.84
CCDC47-206ENST00000584112 CALML5Q9NZT1 146 aa9.83□□□□□ -0.84
CCDC47-206ENST00000584112 ZIM2Q9NZV7 527 aa9.83□□□□□ -0.84
CCDC47-206ENST00000584112 P2RX2Q9UBL9 471 aa9.83□□□□□ -0.84
CCDC47-206ENST00000584112 ING1Q9UK53 422 aaPredicted RBP9.83□□□□□ -0.84
CCDC47-206ENST00000584112 RNF115Q9Y4L5 304 aa9.83□□□□□ -0.84
CCDC47-206ENST00000584112 IGKV3D-15A0A087WSY6 115 aa9.82□□□□□ -0.84
CCDC47-206ENST00000584112 CFAP73A6NFT4 308 aa9.82□□□□□ -0.84
CCDC47-206ENST00000584112 CLDN24A6NM45 220 aa9.82□□□□□ -0.84
CCDC47-206ENST00000584112 C9JVG2 144 aa9.82□□□□□ -0.84
CCDC47-206ENST00000584112 FAAHO00519 579 aa9.82□□□□□ -0.84
CCDC47-206ENST00000584112 KLF11O14901 512 aa9.82□□□□□ -0.84
CCDC47-206ENST00000584112 BCAS1O75363 584 aaPredicted RBP9.82□□□□□ -0.84
CCDC47-206ENST00000584112 ANP32DO95626 131 aa9.82□□□□□ -0.84
CCDC47-206ENST00000584112 PLAUP00749 431 aa9.82□□□□□ -0.84
CCDC47-206ENST00000584112 GSNP06396 782 aa9.82□□□□□ -0.84
CCDC47-206ENST00000584112 CHRM4P08173 479 aa9.82□□□□□ -0.84
CCDC47-206ENST00000584112 PAX1P15863 534 aa9.82□□□□□ -0.84
CCDC47-206ENST00000584112 RPS4Y1P22090 263 aaKnown RBP9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms