RNA–Protein interactions for RNA: ENST00000584083.5

SS18-224, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 663 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-224ENST00000584083 ADAP00813 363 aa18.13■□□□□ 0.49
SS18-224ENST00000584083 THBDP07204 575 aa18.13■□□□□ 0.49
SS18-224ENST00000584083 TROVE2P10155 538 aaKnown RBP eCLIP18.13■□□□□ 0.49
SS18-224ENST00000584083 IL32P24001 234 aa18.13■□□□□ 0.49
SS18-224ENST00000584083 OR3A2P47893 321 aa18.13■□□□□ 0.49
SS18-224ENST00000584083 SLC35A1P78382 337 aa18.13■□□□□ 0.49
SS18-224ENST00000584083 CDK6Q00534 326 aa18.13■□□□□ 0.49
SS18-224ENST00000584083 METTL21CQ5VZV1 264 aa18.13■□□□□ 0.49
SS18-224ENST00000584083 ABLIM2Q6H8Q1 611 aa18.13■□□□□ 0.49
SS18-224ENST00000584083 ALKBH2Q6NS38 261 aa18.13■□□□□ 0.49
SS18-224ENST00000584083 REEP3Q6NUK4 255 aa18.13■□□□□ 0.49
SS18-224ENST00000584083 DLEU7Q6UYE1 221 aa18.13■□□□□ 0.49
SS18-224ENST00000584083 SPNS3Q6ZMD2 512 aa18.13■□□□□ 0.49
SS18-224ENST00000584083 GALNT5Q7Z7M9 940 aa18.13■□□□□ 0.49
SS18-224ENST00000584083 SERPINA11Q86U17 422 aa18.13■□□□□ 0.49
SS18-224ENST00000584083 LSRQ86X29 649 aaPredicted RBP18.13■□□□□ 0.49
SS18-224ENST00000584083 KRT73Q86Y46 540 aa18.13■□□□□ 0.49
SS18-224ENST00000584083 WFDC8Q8IUA0 241 aa18.13■□□□□ 0.49
SS18-224ENST00000584083 ZNF100Q8IYN0 542 aa18.13■□□□□ 0.49
SS18-224ENST00000584083 C10orf111Q8N326 155 aa18.13■□□□□ 0.49
SS18-224ENST00000584083 PIGXQ8TBF5 258 aa18.13■□□□□ 0.49
SS18-224ENST00000584083 TMEM120AQ9BXJ8 343 aa18.13■□□□□ 0.49
SS18-224ENST00000584083 IKZF5Q9H5V7 419 aa18.13■□□□□ 0.49
SS18-224ENST00000584083 PRDM4Q9UKN5 801 aa18.13■□□□□ 0.49
SS18-224ENST00000584083 CHST2Q9Y4C5 530 aa18.13■□□□□ 0.49
SS18-224ENST00000584083 GMEB1Q9Y692 573 aa18.13■□□□□ 0.49
SS18-224ENST00000584083 F8P00451 2351 aa18.13■□□□□ 0.49
SS18-224ENST00000584083 PRR14LQ5THK1 2151 aa18.13■□□□□ 0.49
SS18-224ENST00000584083 ZC3H12DA2A288 527 aaKnown RBP18.12■□□□□ 0.49
SS18-224ENST00000584083 GCM2O75603 506 aaPredicted RBP18.12■□□□□ 0.49
SS18-224ENST00000584083 ETS2P15036 469 aa18.12■□□□□ 0.49
SS18-224ENST00000584083 GPX2P18283 190 aa18.12■□□□□ 0.49
SS18-224ENST00000584083 FPR1P21462 350 aa18.12■□□□□ 0.49
SS18-224ENST00000584083 PDK3Q15120 406 aa18.12■□□□□ 0.49
SS18-224ENST00000584083 TSC22D1Q15714 1073 aa18.12■□□□□ 0.49
SS18-224ENST00000584083 HSP90B2PQ58FF3 399 aa18.12■□□□□ 0.49
SS18-224ENST00000584083 SFRP5Q5T4F7 317 aa18.12■□□□□ 0.49
SS18-224ENST00000584083 ZC3HAV1Q7Z2W4 902 aaKnown RBP18.12■□□□□ 0.49
SS18-224ENST00000584083 DHDDSQ86SQ9 333 aa18.12■□□□□ 0.49
SS18-224ENST00000584083 CCDC103Q8IW40 242 aa18.12■□□□□ 0.49
SS18-224ENST00000584083 S100PBPQ96BU1 408 aa18.12■□□□□ 0.49
SS18-224ENST00000584083 FOXC2Q99958 501 aa18.12■□□□□ 0.49
SS18-224ENST00000584083 CPPED1Q9BRF8 314 aaPredicted RBP18.12■□□□□ 0.49
SS18-224ENST00000584083 NAA11Q9BSU3 229 aaPredicted RBP18.12■□□□□ 0.49
SS18-224ENST00000584083 OR10A4Q9H209 315 aa18.12■□□□□ 0.49
SS18-224ENST00000584083 PRSS50Q9UI38 385 aa18.12■□□□□ 0.49
SS18-224ENST00000584083 CELSR1Q9NYQ6 3014 aa18.12■□□□□ 0.49
SS18-224ENST00000584083 PRRC2AP48634 2157 aaKnown RBP18.11■□□□□ 0.49
SS18-224ENST00000584083 MED13LQ71F56 2210 aa18.11■□□□□ 0.49
SS18-224ENST00000584083 ZNF814B7Z6K7 855 aa18.11■□□□□ 0.49
SS18-224ENST00000584083 FRS3O43559 492 aa18.11■□□□□ 0.49
SS18-224ENST00000584083 VIMP08670 466 aaKnown RBP18.11■□□□□ 0.49
SS18-224ENST00000584083 IMPDH2P12268 514 aa18.11■□□□□ 0.49
SS18-224ENST00000584083 SLC6A2P23975 617 aa18.11■□□□□ 0.49
SS18-224ENST00000584083 IDUAP35475 653 aa18.11■□□□□ 0.49
SS18-224ENST00000584083 SF3A3Q12874 501 aaKnown RBP eCLIP18.11■□□□□ 0.49
SS18-224ENST00000584083 SCARB2Q14108 478 aa18.11■□□□□ 0.49
SS18-224ENST00000584083 P2RY6Q15077 328 aa18.11■□□□□ 0.49
SS18-224ENST00000584083 RUNDC3AQ59EK9 446 aa18.11■□□□□ 0.49
SS18-224ENST00000584083 KISS1RQ969F8 398 aaPredicted RBP18.11■□□□□ 0.49
SS18-224ENST00000584083 SPATA5L1Q9BVQ7 753 aa18.11■□□□□ 0.49
SS18-224ENST00000584083 FGFR1OP2Q9NVK5 253 aa18.11■□□□□ 0.49
SS18-224ENST00000584083 NOSIPQ9Y314 301 aaKnown RBP18.11■□□□□ 0.49
SS18-224ENST00000584083 IGKV3D-15A0A087WSY6 115 aa18.1■□□□□ 0.49
SS18-224ENST00000584083 ZNF716A6NP11 495 aa18.1■□□□□ 0.49
SS18-224ENST00000584083 GPR171O14626 319 aa18.1■□□□□ 0.49
SS18-224ENST00000584083 EIF1BO60739 113 aaKnown RBP18.1■□□□□ 0.49
SS18-224ENST00000584083 ATE1O95260 518 aa18.1■□□□□ 0.49
SS18-224ENST00000584083 HOXC5Q00444 222 aa18.1■□□□□ 0.49
SS18-224ENST00000584083 BNIP2Q12982 314 aa18.1■□□□□ 0.49
SS18-224ENST00000584083 ITGADQ13349 1161 aa18.1■□□□□ 0.49
SS18-224ENST00000584083 NFYCQ13952 458 aa18.1■□□□□ 0.49
SS18-224ENST00000584083 CEACAM7Q14002 265 aa18.1■□□□□ 0.49
SS18-224ENST00000584083 BEX5Q5H9J7 111 aa18.1■□□□□ 0.49
SS18-224ENST00000584083 Q6ZT83 130 aa18.1■□□□□ 0.49
SS18-224ENST00000584083 DPP10Q8N608 796 aa18.1■□□□□ 0.49
SS18-224ENST00000584083 TSPEARQ8WU66 669 aa18.1■□□□□ 0.49
SS18-224ENST00000584083 MBD6Q96DN6 1003 aa18.1■□□□□ 0.49
SS18-224ENST00000584083 HS3ST6Q96QI5 342 aa18.1■□□□□ 0.49
SS18-224ENST00000584083 POTEKPQ9BYX7 375 aa18.1■□□□□ 0.49
SS18-224ENST00000584083 TMEM38AQ9H6F2 299 aa18.1■□□□□ 0.49
SS18-224ENST00000584083 TEP1Q99973 2627 aaKnown RBP18.1■□□□□ 0.49
SS18-224ENST00000584083 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP18.09■□□□□ 0.49
SS18-224ENST00000584083 KLF4O43474 513 aa18.09■□□□□ 0.49
SS18-224ENST00000584083 RAMP1O60894 148 aa18.09■□□□□ 0.49
SS18-224ENST00000584083 GPIP06744 558 aa18.09■□□□□ 0.49
SS18-224ENST00000584083 EDNRAP25101 427 aa18.09■□□□□ 0.49
SS18-224ENST00000584083 AQP1P29972 269 aa18.09■□□□□ 0.49
SS18-224ENST00000584083 PRKAR1BP31321 381 aa18.09■□□□□ 0.49
SS18-224ENST00000584083 ARFIP2P53365 341 aa18.09■□□□□ 0.49
SS18-224ENST00000584083 H3F3AP84243 136 aa18.09■□□□□ 0.49
SS18-224ENST00000584083 OR7A5Q15622 319 aa18.09■□□□□ 0.49
SS18-224ENST00000584083 CYP51A1Q16850 503 aa18.09■□□□□ 0.49
SS18-224ENST00000584083 BHLHA15Q7RTS1 189 aaPredicted RBP18.09■□□□□ 0.49
SS18-224ENST00000584083 RETREG3Q86VR2 466 aa18.09■□□□□ 0.49
SS18-224ENST00000584083 UBE2J2Q8N2K1 259 aa18.09■□□□□ 0.49
SS18-224ENST00000584083 SLC35B4Q969S0 331 aa18.09■□□□□ 0.49
SS18-224ENST00000584083 APH1AQ96BI3 265 aa18.09■□□□□ 0.49
SS18-224ENST00000584083 ANKRD27Q96NW4 1050 aa18.09■□□□□ 0.49
SS18-224ENST00000584083 ZNF607Q96SK3 696 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms