RNA–Protein interactions for RNA: ENST00000583649.1

CASC3-208, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-208ENST00000583649 GPR160Q9UJ42 338 aa9.6□□□□□ -0.87
CASC3-208ENST00000583649 FAF1Q9UNN5 650 aaPredicted RBP9.6□□□□□ -0.87
CASC3-208ENST00000583649 TRAPPC4Q9Y296 219 aa9.6□□□□□ -0.87
CASC3-208ENST00000583649 ARPC4-TTLL3A0A0A6YYG9 625 aa9.59□□□□□ -0.87
CASC3-208ENST00000583649 SUPT7LO94864 414 aa9.59□□□□□ -0.87
CASC3-208ENST00000583649 CRYBA1P05813 215 aa9.59□□□□□ -0.87
CASC3-208ENST00000583649 GSNP06396 782 aa9.59□□□□□ -0.87
CASC3-208ENST00000583649 RNASE1P07998 156 aaKnown RBP9.59□□□□□ -0.87
CASC3-208ENST00000583649 TAC1P20366 129 aa9.59□□□□□ -0.87
CASC3-208ENST00000583649 HSD17B3P37058 310 aa9.59□□□□□ -0.87
CASC3-208ENST00000583649 FOXG1P55316 489 aaPredicted RBP9.59□□□□□ -0.87
CASC3-208ENST00000583649 SH3BGRP55822 239 aaPredicted RBP9.59□□□□□ -0.87
CASC3-208ENST00000583649 SESN3P58005 492 aa9.59□□□□□ -0.87
CASC3-208ENST00000583649 TP53BP2Q13625 1128 aa9.59□□□□□ -0.87
CASC3-208ENST00000583649 DAG1Q14118 895 aa9.59□□□□□ -0.87
CASC3-208ENST00000583649 UAP1Q16222 522 aaPredicted RBP9.59□□□□□ -0.87
CASC3-208ENST00000583649 ARMCX4Q5H9R4 360 aa9.59□□□□□ -0.87
CASC3-208ENST00000583649 ZNF362Q5T0B9 420 aaPredicted RBP9.59□□□□□ -0.87
CASC3-208ENST00000583649 CDC73Q6P1J9 531 aa9.59□□□□□ -0.87
CASC3-208ENST00000583649 C1orf229Q6ZS94 237 aaPredicted RBP9.59□□□□□ -0.87
CASC3-208ENST00000583649 AAED1Q7RTV5 226 aa9.59□□□□□ -0.87
CASC3-208ENST00000583649 ZAR1Q86SH2 424 aa9.59□□□□□ -0.87
CASC3-208ENST00000583649 SIGLECL1Q8N7X8 197 aa9.59□□□□□ -0.87
CASC3-208ENST00000583649 MAGEE2Q8TD90 523 aaPredicted RBP9.59□□□□□ -0.87
CASC3-208ENST00000583649 ADAMTS15Q8TE58 950 aa9.59□□□□□ -0.87
CASC3-208ENST00000583649 C22orf15Q8WYQ4 148 aa9.59□□□□□ -0.87
CASC3-208ENST00000583649 PMM1Q92871 262 aa9.59□□□□□ -0.87
CASC3-208ENST00000583649 TMEM45BQ96B21 275 aa9.59□□□□□ -0.87
CASC3-208ENST00000583649 PPCDCQ96CD2 204 aa9.59□□□□□ -0.87
CASC3-208ENST00000583649 DDIT4LQ96D03 193 aa9.59□□□□□ -0.87
CASC3-208ENST00000583649 TIMD4Q96H15 378 aa9.59□□□□□ -0.87
CASC3-208ENST00000583649 GPR78Q96P69 363 aa9.59□□□□□ -0.87
CASC3-208ENST00000583649 ZNF382Q96SR6 550 aa9.59□□□□□ -0.87
CASC3-208ENST00000583649 MRPL57Q9BQC6 102 aaKnown RBP9.59□□□□□ -0.87
CASC3-208ENST00000583649 THUMPD3Q9BV44 507 aaKnown RBP9.59□□□□□ -0.87
CASC3-208ENST00000583649 C1QTNF3Q9BXJ4 246 aa9.59□□□□□ -0.87
CASC3-208ENST00000583649 LAT2Q9GZY6 243 aa9.59□□□□□ -0.87
CASC3-208ENST00000583649 QRSL1Q9H0R6 528 aaKnown RBP9.59□□□□□ -0.87
CASC3-208ENST00000583649 MRPL46Q9H2W6 279 aaKnown RBP9.59□□□□□ -0.87
CASC3-208ENST00000583649 PIF1Q9H611 641 aa9.59□□□□□ -0.87
CASC3-208ENST00000583649 ACSS1Q9NUB1 689 aaPredicted RBP9.59□□□□□ -0.87
CASC3-208ENST00000583649 ACER3Q9NUN7 267 aa9.59□□□□□ -0.87
CASC3-208ENST00000583649 ZNF346Q9UL40 294 aaKnown RBP9.59□□□□□ -0.87
CASC3-208ENST00000583649 FLVCR1Q9Y5Y0 555 aa9.59□□□□□ -0.87
CASC3-208ENST00000583649 DNAJC9-AS1A6NH13 148 aa9.58□□□□□ -0.88
CASC3-208ENST00000583649 C3orf80F5H4A9 247 aa9.58□□□□□ -0.88
CASC3-208ENST00000583649 CLDN34H7C241 214 aa9.58□□□□□ -0.88
CASC3-208ENST00000583649 PLPP2O43688 288 aa9.58□□□□□ -0.88
CASC3-208ENST00000583649 IGLV1-44P01699 117 aa9.58□□□□□ -0.88
CASC3-208ENST00000583649 CHN1P15882 459 aa9.58□□□□□ -0.88
CASC3-208ENST00000583649 TCP1P17987 556 aaKnown RBP9.58□□□□□ -0.88
CASC3-208ENST00000583649 ARR3P36575 388 aa9.58□□□□□ -0.88
CASC3-208ENST00000583649 RAD52P43351 418 aa9.58□□□□□ -0.88
CASC3-208ENST00000583649 HTR3AP46098 478 aa9.58□□□□□ -0.88
CASC3-208ENST00000583649 MTNR1AP48039 350 aa9.58□□□□□ -0.88
CASC3-208ENST00000583649 ATP4BP51164 291 aa9.58□□□□□ -0.88
CASC3-208ENST00000583649 SELENOVP59797 346 aa9.58□□□□□ -0.88
CASC3-208ENST00000583649 LMO4P61968 165 aa9.58□□□□□ -0.88
CASC3-208ENST00000583649 RPS23P62266 143 aaKnown RBP9.58□□□□□ -0.88
CASC3-208ENST00000583649 SNTB2Q13425 540 aaKnown RBP9.58□□□□□ -0.88
CASC3-208ENST00000583649 ELFN2Q5R3F8 820 aa9.58□□□□□ -0.88
CASC3-208ENST00000583649 DCST2Q5T1A1 773 aa9.58□□□□□ -0.88
CASC3-208ENST00000583649 BRICD5Q6PL45 260 aa9.58□□□□□ -0.88
CASC3-208ENST00000583649 GRINAQ7Z429 371 aa9.58□□□□□ -0.88
CASC3-208ENST00000583649 CCDC103Q8IW40 242 aa9.58□□□□□ -0.88
CASC3-208ENST00000583649 CCDC36Q8IYA8 594 aa9.58□□□□□ -0.88
CASC3-208ENST00000583649 CDK20Q8IZL9 346 aa9.58□□□□□ -0.88
CASC3-208ENST00000583649 OR1K1Q8NGR3 316 aa9.58□□□□□ -0.88
CASC3-208ENST00000583649 RNF217Q8TC41 542 aa9.58□□□□□ -0.88
CASC3-208ENST00000583649 CDS1Q92903 461 aa9.58□□□□□ -0.88
CASC3-208ENST00000583649 POP5Q969H6 163 aaKnown RBP9.58□□□□□ -0.88
CASC3-208ENST00000583649 METTL2AQ96IZ6 378 aaKnown RBP9.58□□□□□ -0.88
CASC3-208ENST00000583649 KLHDC3Q9BQ90 382 aa9.58□□□□□ -0.88
CASC3-208ENST00000583649 SF3B5Q9BWJ5 86 aaKnown RBP9.58□□□□□ -0.88
CASC3-208ENST00000583649 ZNF385DQ9H6B1 395 aa9.58□□□□□ -0.88
CASC3-208ENST00000583649 BEX1Q9HBH7 125 aa9.58□□□□□ -0.88
CASC3-208ENST00000583649 RRAGDQ9NQL2 400 aaPredicted RBP9.58□□□□□ -0.88
CASC3-208ENST00000583649 ZNF275Q9NSD4 429 aaPredicted RBP9.58□□□□□ -0.88
CASC3-208ENST00000583649 ZCCHC3Q9NUD5 404 aaKnown RBP9.58□□□□□ -0.88
CASC3-208ENST00000583649 SH3BP4Q9P0V3 963 aa9.58□□□□□ -0.88
CASC3-208ENST00000583649 RNF14Q9UBS8 474 aa9.58□□□□□ -0.88
CASC3-208ENST00000583649 NUP50Q9UKX7 468 aa9.58□□□□□ -0.88
CASC3-208ENST00000583649 SNX12Q9UMY4 172 aa9.58□□□□□ -0.88
CASC3-208ENST00000583649 SNX24Q9Y343 169 aa9.58□□□□□ -0.88
CASC3-208ENST00000583649 MMP24Q9Y5R2 645 aa9.58□□□□□ -0.88
CASC3-208ENST00000583649 GIMAP1-GIMAP5A0A087WTJ2 511 aa9.57□□□□□ -0.88
CASC3-208ENST00000583649 SERTM1A2A2V5 107 aa9.57□□□□□ -0.88
CASC3-208ENST00000583649 CCDC188H7C350 402 aa9.57□□□□□ -0.88
CASC3-208ENST00000583649 SKAP2O75563 359 aaPredicted RBP9.57□□□□□ -0.88
CASC3-208ENST00000583649 CRCPO75575 148 aa9.57□□□□□ -0.88
CASC3-208ENST00000583649 CSTAP01040 98 aa9.57□□□□□ -0.88
CASC3-208ENST00000583649 AVPP01185 164 aa9.57□□□□□ -0.88
CASC3-208ENST00000583649 IGKV3-15P01624 115 aa9.57□□□□□ -0.88
CASC3-208ENST00000583649 CBR1P16152 277 aa9.57□□□□□ -0.88
CASC3-208ENST00000583649 COL8A2P25067 703 aa9.57□□□□□ -0.88
CASC3-208ENST00000583649 NTF4P34130 210 aa9.57□□□□□ -0.88
CASC3-208ENST00000583649 MAP2K6P52564 334 aa9.57□□□□□ -0.88
CASC3-208ENST00000583649 PKNOX1P55347 436 aa9.57□□□□□ -0.88
CASC3-208ENST00000583649 LASP1Q14847 261 aaKnown RBP9.57□□□□□ -0.88
CASC3-208ENST00000583649 SYT10Q6XYQ8 523 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms