RNA–Protein interactions for RNA: ENST00000580972.1

RNU4ATAC-201, Transcript of RNA, U4atac small nuclear (U12-dependent splicing), humanhuman

BASIC

Gene RNU4ATAC, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4ATAC-201ENST00000580972 FAM20BO75063 409 aa5.56□□□□□ -1.52
RNU4ATAC-201ENST00000580972 NPIPB7O75200 414 aa5.56□□□□□ -1.52
RNU4ATAC-201ENST00000580972 TRIM3O75382 744 aaPredicted RBP5.56□□□□□ -1.52
RNU4ATAC-201ENST00000580972 SERPINI2O75830 405 aa5.56□□□□□ -1.52
RNU4ATAC-201ENST00000580972 MT-ND2P03891 347 aa5.56□□□□□ -1.52
RNU4ATAC-201ENST00000580972 IMPDH2P12268 514 aa5.56□□□□□ -1.52
RNU4ATAC-201ENST00000580972 ICAM2P13598 275 aa5.56□□□□□ -1.52
RNU4ATAC-201ENST00000580972 HK1P19367 917 aa5.56□□□□□ -1.52
RNU4ATAC-201ENST00000580972 GSTM3P21266 225 aa5.56□□□□□ -1.52
RNU4ATAC-201ENST00000580972 CRHBPP24387 322 aa5.56□□□□□ -1.52
RNU4ATAC-201ENST00000580972 CXCR1P25024 350 aa5.56□□□□□ -1.52
RNU4ATAC-201ENST00000580972 NOS3P29474 1203 aa5.56□□□□□ -1.52
RNU4ATAC-201ENST00000580972 GRPRP30550 384 aa5.56□□□□□ -1.52
RNU4ATAC-201ENST00000580972 IFNGR2P38484 337 aa5.56□□□□□ -1.52
RNU4ATAC-201ENST00000580972 EIF2S3P41091 472 aaKnown RBP5.56□□□□□ -1.52
RNU4ATAC-201ENST00000580972 GIPRP48546 466 aa5.56□□□□□ -1.52
RNU4ATAC-201ENST00000580972 MASP1P48740 699 aa5.56□□□□□ -1.52
RNU4ATAC-201ENST00000580972 CD97P48960 835 aa5.56□□□□□ -1.52
RNU4ATAC-201ENST00000580972 PCYT1AP49585 367 aa5.56□□□□□ -1.52
RNU4ATAC-201ENST00000580972 NUP107P57740 925 aa5.56□□□□□ -1.52
RNU4ATAC-201ENST00000580972 LCN6P62502 163 aa5.56□□□□□ -1.52
RNU4ATAC-201ENST00000580972 ERVK-25P63136 954 aa5.56□□□□□ -1.52
RNU4ATAC-201ENST00000580972 PSPHP78330 225 aa5.56□□□□□ -1.52
RNU4ATAC-201ENST00000580972 CDK5Q00535 292 aa5.56□□□□□ -1.52
RNU4ATAC-201ENST00000580972 PMP22Q01453 160 aa5.56□□□□□ -1.52
RNU4ATAC-201ENST00000580972 C17orf67Q0P5P2 114 aa5.56□□□□□ -1.52
RNU4ATAC-201ENST00000580972 FOXO1Q12778 655 aa5.56□□□□□ -1.52
RNU4ATAC-201ENST00000580972 AIMP2Q13155 320 aaKnown RBP5.56□□□□□ -1.52
RNU4ATAC-201ENST00000580972 TOP3AQ13472 1001 aaPredicted RBP5.56□□□□□ -1.52
RNU4ATAC-201ENST00000580972 BLMHQ13867 455 aa5.56□□□□□ -1.52
RNU4ATAC-201ENST00000580972 OR1C1Q15619 314 aa5.56□□□□□ -1.52
RNU4ATAC-201ENST00000580972 ABHD17BQ5VST6 288 aa5.56□□□□□ -1.52
RNU4ATAC-201ENST00000580972 C1orf140Q5VVS0 124 aa5.56□□□□□ -1.52
RNU4ATAC-201ENST00000580972 FOXB2Q5VYV0 432 aa5.56□□□□□ -1.52
RNU4ATAC-201ENST00000580972 OTPQ5XKR4 325 aa5.56□□□□□ -1.52
RNU4ATAC-201ENST00000580972 SLC22A10Q63ZE4 541 aa5.56□□□□□ -1.52
RNU4ATAC-201ENST00000580972 SMARCD3Q6STE5 483 aa5.56□□□□□ -1.52
RNU4ATAC-201ENST00000580972 PTCHD4Q6ZW05 846 aa5.56□□□□□ -1.52
RNU4ATAC-201ENST00000580972 TMPRSS11FQ6ZWK6 438 aa5.56□□□□□ -1.52
RNU4ATAC-201ENST00000580972 SHFQ7M4L6 423 aa5.56□□□□□ -1.52
RNU4ATAC-201ENST00000580972 GRINAQ7Z429 371 aa5.56□□□□□ -1.52
RNU4ATAC-201ENST00000580972 PLCZ1Q86YW0 608 aa5.56□□□□□ -1.52
RNU4ATAC-201ENST00000580972 MISPQ8IVT2 679 aa5.56□□□□□ -1.52
RNU4ATAC-201ENST00000580972 LRRC75AQ8NAA5 344 aa5.56□□□□□ -1.52
RNU4ATAC-201ENST00000580972 CYB561A3Q8NBI2 242 aa5.56□□□□□ -1.52
RNU4ATAC-201ENST00000580972 CLEC1AQ8NC01 280 aa5.56□□□□□ -1.52
RNU4ATAC-201ENST00000580972 PSD4Q8NDX1 1056 aa5.56□□□□□ -1.52
RNU4ATAC-201ENST00000580972 TSPAN14Q8NG11 270 aa5.56□□□□□ -1.52
RNU4ATAC-201ENST00000580972 TEX47Q8TBZ9 253 aa5.56□□□□□ -1.52
RNU4ATAC-201ENST00000580972 OIT3Q8WWZ8 545 aa5.56□□□□□ -1.52
RNU4ATAC-201ENST00000580972 SMPDL3BQ92485 455 aa5.56□□□□□ -1.52
RNU4ATAC-201ENST00000580972 HDAC2Q92769 488 aaKnown RBP5.56□□□□□ -1.52
RNU4ATAC-201ENST00000580972 TMIGD2Q96BF3 282 aa5.56□□□□□ -1.52
RNU4ATAC-201ENST00000580972 RASD2Q96D21 266 aa5.56□□□□□ -1.52
RNU4ATAC-201ENST00000580972 ZNF582Q96NG8 517 aaPredicted RBP5.56□□□□□ -1.52
RNU4ATAC-201ENST00000580972 APOL4Q9BPW4 351 aa5.56□□□□□ -1.52
RNU4ATAC-201ENST00000580972 TAPBPLQ9BX59 468 aa5.56□□□□□ -1.52
RNU4ATAC-201ENST00000580972 FN3KQ9H479 309 aa5.56□□□□□ -1.52
RNU4ATAC-201ENST00000580972 EVA1AQ9H8M9 152 aa5.56□□□□□ -1.52
RNU4ATAC-201ENST00000580972 HINT3Q9NQE9 182 aaKnown RBP5.56□□□□□ -1.52
RNU4ATAC-201ENST00000580972 IMPAD1Q9NX62 359 aa5.56□□□□□ -1.52
RNU4ATAC-201ENST00000580972 LRFN1Q9P244 771 aa5.56□□□□□ -1.52
RNU4ATAC-201ENST00000580972 ZNF346Q9UL40 294 aaKnown RBP5.56□□□□□ -1.52
RNU4ATAC-201ENST00000580972 MYRFQ9Y2G1 1151 aa5.56□□□□□ -1.52
RNU4ATAC-201ENST00000580972 NUP214P35658 2090 aaPredicted RBP5.55□□□□□ -1.52
RNU4ATAC-201ENST00000580972 CUL9Q8IWT3 2517 aa5.55□□□□□ -1.52
RNU4ATAC-201ENST00000580972 TRAV36DV7A0A075B6V5 113 aa5.55□□□□□ -1.52
RNU4ATAC-201ENST00000580972 DPPA5A6NC42 116 aa5.55□□□□□ -1.52
RNU4ATAC-201ENST00000580972 TRIM64A6NGJ6 449 aa5.55□□□□□ -1.52
RNU4ATAC-201ENST00000580972 PTGES3LE9PB15 166 aa5.55□□□□□ -1.52
RNU4ATAC-201ENST00000580972 C11orf98E9PRG8 122 aa5.55□□□□□ -1.52
RNU4ATAC-201ENST00000580972 BLOC1S5-TXNDC5H3BN57 136 aa5.55□□□□□ -1.52
RNU4ATAC-201ENST00000580972 M0R082 166 aa5.55□□□□□ -1.52
RNU4ATAC-201ENST00000580972 ETV2O00321 342 aaPredicted RBP5.55□□□□□ -1.52
RNU4ATAC-201ENST00000580972 SURF4O15260 269 aa5.55□□□□□ -1.52
RNU4ATAC-201ENST00000580972 HCN1O60741 890 aa5.55□□□□□ -1.52
RNU4ATAC-201ENST00000580972 RAMP1O60894 148 aa5.55□□□□□ -1.52
RNU4ATAC-201ENST00000580972 SLC25A12O75746 678 aa5.55□□□□□ -1.52
RNU4ATAC-201ENST00000580972 TNFAIP8O95379 198 aa5.55□□□□□ -1.52
RNU4ATAC-201ENST00000580972 PLGP00747 810 aaPredicted RBP5.55□□□□□ -1.52
RNU4ATAC-201ENST00000580972 PDGFAP04085 211 aa5.55□□□□□ -1.52
RNU4ATAC-201ENST00000580972 P04436 131 aa5.55□□□□□ -1.52
RNU4ATAC-201ENST00000580972 ITGB2P05107 769 aa5.55□□□□□ -1.52
RNU4ATAC-201ENST00000580972 F13BP05160 661 aa5.55□□□□□ -1.52
RNU4ATAC-201ENST00000580972 TFAP2AP05549 437 aa5.55□□□□□ -1.52
RNU4ATAC-201ENST00000580972 STSP08842 583 aa5.55□□□□□ -1.52
RNU4ATAC-201ENST00000580972 TFPIP10646 304 aa5.55□□□□□ -1.52
RNU4ATAC-201ENST00000580972 CLUP10909 449 aa5.55□□□□□ -1.52
RNU4ATAC-201ENST00000580972 PNMTP11086 282 aa5.55□□□□□ -1.52
RNU4ATAC-201ENST00000580972 DPP4P27487 766 aa5.55□□□□□ -1.52
RNU4ATAC-201ENST00000580972 SFTPDP35247 375 aa5.55□□□□□ -1.52
RNU4ATAC-201ENST00000580972 CYB561P49447 251 aa5.55□□□□□ -1.52
RNU4ATAC-201ENST00000580972 ZNF41P51814 821 aaPredicted RBP5.55□□□□□ -1.52
RNU4ATAC-201ENST00000580972 SUMO3P55854 103 aaPredicted RBP5.55□□□□□ -1.52
RNU4ATAC-201ENST00000580972 B3GALT5-AS1P59052 145 aa5.55□□□□□ -1.52
RNU4ATAC-201ENST00000580972 CDC42P60953 191 aa5.55□□□□□ -1.52
RNU4ATAC-201ENST00000580972 ZNF91Q05481 1191 aa5.55□□□□□ -1.52
RNU4ATAC-201ENST00000580972 COX10Q12887 443 aa5.55□□□□□ -1.52
RNU4ATAC-201ENST00000580972 SNTA1Q13424 505 aa5.55□□□□□ -1.52
RNU4ATAC-201ENST00000580972 IL18R1Q13478 541 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms