RNA–Protein interactions for RNA: ENST00000580654.5

SMARCE1-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-217ENST00000580654 OTUB1Q96FW1 271 aaPredicted RBP6.56□□□□□ -1.36
SMARCE1-217ENST00000580654 AMDHD1Q96NU7 426 aa6.56□□□□□ -1.36
SMARCE1-217ENST00000580654 MRPL37Q9BZE1 423 aaKnown RBP6.56□□□□□ -1.36
SMARCE1-217ENST00000580654 TRIM5Q9C035 493 aa6.56□□□□□ -1.36
SMARCE1-217ENST00000580654 NELFAQ9H3P2 528 aa6.56□□□□□ -1.36
SMARCE1-217ENST00000580654 ELOVL6Q9H5J4 265 aa6.56□□□□□ -1.36
SMARCE1-217ENST00000580654 BRF2Q9HAW0 419 aa6.56□□□□□ -1.36
SMARCE1-217ENST00000580654 EQTNQ9NQ60 294 aa6.56□□□□□ -1.36
SMARCE1-217ENST00000580654 UPB1Q9UBR1 384 aa6.56□□□□□ -1.36
SMARCE1-217ENST00000580654 ZNF225Q9UK10 706 aa6.56□□□□□ -1.36
SMARCE1-217ENST00000580654 PCTPQ9UKL6 214 aa6.56□□□□□ -1.36
SMARCE1-217ENST00000580654 PLXNB1O43157 2135 aa6.56□□□□□ -1.36
SMARCE1-217ENST00000580654 DYNC2H1Q8NCM8 4307 aaKnown RBP6.55□□□□□ -1.36
SMARCE1-217ENST00000580654 TTC36A6NLP5 189 aa6.55□□□□□ -1.36
SMARCE1-217ENST00000580654 SULT2B1O00204 365 aa6.55□□□□□ -1.36
SMARCE1-217ENST00000580654 GPR171O14626 319 aa6.55□□□□□ -1.36
SMARCE1-217ENST00000580654 IGKV3-15P01624 115 aa6.55□□□□□ -1.36
SMARCE1-217ENST00000580654 IGHV2-5P01817 119 aa6.55□□□□□ -1.36
SMARCE1-217ENST00000580654 HPGDP15428 266 aa6.55□□□□□ -1.36
SMARCE1-217ENST00000580654 SELEP16581 610 aa6.55□□□□□ -1.36
SMARCE1-217ENST00000580654 DDCP20711 480 aa6.55□□□□□ -1.36
SMARCE1-217ENST00000580654 TGFBR3Q03167 851 aa6.55□□□□□ -1.36
SMARCE1-217ENST00000580654 HEPACAMQ14CZ8 416 aa6.55□□□□□ -1.36
SMARCE1-217ENST00000580654 PPP1R7Q15435 360 aa6.55□□□□□ -1.36
SMARCE1-217ENST00000580654 DUSP5Q16690 384 aa6.55□□□□□ -1.36
SMARCE1-217ENST00000580654 C3orf36Q3SXR2 165 aa6.55□□□□□ -1.36
SMARCE1-217ENST00000580654 TIGD2Q4W5G0 525 aa6.55□□□□□ -1.36
SMARCE1-217ENST00000580654 KLHL26Q53HC5 615 aa6.55□□□□□ -1.36
SMARCE1-217ENST00000580654 EXOSC6Q5RKV6 272 aaKnown RBP6.55□□□□□ -1.36
SMARCE1-217ENST00000580654 SAMD5Q5TGI4 173 aa6.55□□□□□ -1.36
SMARCE1-217ENST00000580654 OLFML2AQ68BL7 652 aa6.55□□□□□ -1.36
SMARCE1-217ENST00000580654 METTL2BQ6P1Q9 378 aaKnown RBP6.55□□□□□ -1.36
SMARCE1-217ENST00000580654 ZNF551Q7Z340 670 aaPredicted RBP6.55□□□□□ -1.36
SMARCE1-217ENST00000580654 MTERF4Q7Z6M4 381 aaKnown RBP6.55□□□□□ -1.36
SMARCE1-217ENST00000580654 DEFB108BQ8NET1 73 aa6.55□□□□□ -1.36
SMARCE1-217ENST00000580654 OR1K1Q8NGR3 316 aa6.55□□□□□ -1.36
SMARCE1-217ENST00000580654 OR6Y1Q8NGX8 325 aa6.55□□□□□ -1.36
SMARCE1-217ENST00000580654 FAM110DQ8TAY7 271 aaPredicted RBP6.55□□□□□ -1.36
SMARCE1-217ENST00000580654 APIPQ96GX9 242 aa6.55□□□□□ -1.36
SMARCE1-217ENST00000580654 ARL5BQ96KC2 179 aa6.55□□□□□ -1.36
SMARCE1-217ENST00000580654 ANKRD27Q96NW4 1050 aa6.55□□□□□ -1.36
SMARCE1-217ENST00000580654 GPR78Q96P69 363 aa6.55□□□□□ -1.36
SMARCE1-217ENST00000580654 GPA33Q99795 319 aa6.55□□□□□ -1.36
SMARCE1-217ENST00000580654 CPNE1Q99829 537 aa6.55□□□□□ -1.36
SMARCE1-217ENST00000580654 EBPLQ9BY08 206 aa6.55□□□□□ -1.36
SMARCE1-217ENST00000580654 KRTAP4-2Q9BYR5 136 aa6.55□□□□□ -1.36
SMARCE1-217ENST00000580654 OBP2BQ9NPH6 170 aa6.55□□□□□ -1.36
SMARCE1-217ENST00000580654 PLEK2Q9NYT0 353 aa6.55□□□□□ -1.36
SMARCE1-217ENST00000580654 TAS2R7Q9NYW3 318 aa6.55□□□□□ -1.36
SMARCE1-217ENST00000580654 CPSF2Q9P2I0 782 aaKnown RBP6.55□□□□□ -1.36
SMARCE1-217ENST00000580654 VPS29Q9UBQ0 182 aa6.55□□□□□ -1.36
SMARCE1-217ENST00000580654 REV1Q9UBZ9 1251 aa6.55□□□□□ -1.36
SMARCE1-217ENST00000580654 NUP50Q9UKX7 468 aa6.55□□□□□ -1.36
SMARCE1-217ENST00000580654 TNPO3Q9Y5L0 923 aaKnown RBP6.55□□□□□ -1.36
SMARCE1-217ENST00000580654 FLVCR1Q9Y5Y0 555 aa6.55□□□□□ -1.36
SMARCE1-217ENST00000580654 DNAH9Q9NYC9 4486 aa6.55□□□□□ -1.36
SMARCE1-217ENST00000580654 ARPC4-TTLL3A0A0A6YYG9 625 aa6.54□□□□□ -1.36
SMARCE1-217ENST00000580654 IGHV2OR16-5A0A0B4J2B6 119 aa6.54□□□□□ -1.36
SMARCE1-217ENST00000580654 A0A1B0GUS0 222 aa6.54□□□□□ -1.36
SMARCE1-217ENST00000580654 GNG14A0A1W2PPG7 69 aa6.54□□□□□ -1.36
SMARCE1-217ENST00000580654 ZNF503-AS2A6NEH8 195 aa6.54□□□□□ -1.36
SMARCE1-217ENST00000580654 OR6C65A6NJZ3 312 aa6.54□□□□□ -1.36
SMARCE1-217ENST00000580654 E7ESA3 106 aa6.54□□□□□ -1.36
SMARCE1-217ENST00000580654 M0R233 179 aa6.54□□□□□ -1.36
SMARCE1-217ENST00000580654 SYNGR3O43761 229 aa6.54□□□□□ -1.36
SMARCE1-217ENST00000580654 DNAJA2O60884 412 aa6.54□□□□□ -1.36
SMARCE1-217ENST00000580654 GSNP06396 782 aa6.54□□□□□ -1.36
SMARCE1-217ENST00000580654 IFI6P09912 130 aa6.54□□□□□ -1.36
SMARCE1-217ENST00000580654 PRPS2P11908 318 aa6.54□□□□□ -1.36
SMARCE1-217ENST00000580654 TSPAN8P19075 237 aa6.54□□□□□ -1.36
SMARCE1-217ENST00000580654 GATA3P23771 443 aa6.54□□□□□ -1.36
SMARCE1-217ENST00000580654 SSTR1P30872 391 aa6.54□□□□□ -1.36
SMARCE1-217ENST00000580654 LCN1P31025 176 aa6.54□□□□□ -1.36
SMARCE1-217ENST00000580654 TIA1P31483 386 aaKnown RBP eCLIP6.54□□□□□ -1.36
SMARCE1-217ENST00000580654 ALDH3B1P43353 468 aa6.54□□□□□ -1.36
SMARCE1-217ENST00000580654 FNTAP49354 379 aa6.54□□□□□ -1.36
SMARCE1-217ENST00000580654 RAG2P55895 527 aa6.54□□□□□ -1.36
SMARCE1-217ENST00000580654 CSNK2A1P68400 391 aaPredicted RBP6.54□□□□□ -1.36
SMARCE1-217ENST00000580654 MRPS11P82912 194 aaKnown RBP6.54□□□□□ -1.36
SMARCE1-217ENST00000580654 H3F3AP84243 136 aa6.54□□□□□ -1.36
SMARCE1-217ENST00000580654 MVKQ03426 396 aa6.54□□□□□ -1.36
SMARCE1-217ENST00000580654 ILF2Q12905 390 aaKnown RBP6.54□□□□□ -1.36
SMARCE1-217ENST00000580654 PDIA2Q13087 525 aaKnown RBP6.54□□□□□ -1.36
SMARCE1-217ENST00000580654 MAD2L1BPQ15013 274 aaPredicted RBP6.54□□□□□ -1.36
SMARCE1-217ENST00000580654 FAM189A2Q15884 450 aa6.54□□□□□ -1.36
SMARCE1-217ENST00000580654 TAF9Q16594 264 aa6.54□□□□□ -1.36
SMARCE1-217ENST00000580654 ATP6AP1LQ52LC2 224 aa6.54□□□□□ -1.36
SMARCE1-217ENST00000580654 SYT14P1Q58G82 188 aa6.54□□□□□ -1.36
SMARCE1-217ENST00000580654 FAM71E1Q6IPT2 247 aa6.54□□□□□ -1.36
SMARCE1-217ENST00000580654 C16orf87Q6PH81 154 aa6.54□□□□□ -1.36
SMARCE1-217ENST00000580654 RAPH1Q70E73 1250 aa6.54□□□□□ -1.36
SMARCE1-217ENST00000580654 LINGO2Q7L985 606 aa6.54□□□□□ -1.36
SMARCE1-217ENST00000580654 REC114Q7Z4M0 266 aa6.54□□□□□ -1.36
SMARCE1-217ENST00000580654 LRP11Q86VZ4 500 aa6.54□□□□□ -1.36
SMARCE1-217ENST00000580654 WDFY1Q8IWB7 410 aa6.54□□□□□ -1.36
SMARCE1-217ENST00000580654 PTGR2Q8N8N7 351 aaPredicted RBP6.54□□□□□ -1.36
SMARCE1-217ENST00000580654 ZIC4Q8N9L1 334 aa6.54□□□□□ -1.36
SMARCE1-217ENST00000580654 CDRT4Q8N9R6 151 aa6.54□□□□□ -1.36
SMARCE1-217ENST00000580654 BHLHE22Q8NFJ8 381 aaPredicted RBP6.54□□□□□ -1.36
SMARCE1-217ENST00000580654 RFWD2Q8NHY2 731 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms