RNA–Protein interactions for RNA: ENST00000577246.5

COPS3-214, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 639 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-214ENST00000577246 COMPP49747 757 aaPredicted RBP11.64□□□□□ -0.55
COPS3-214ENST00000577246 DVL1P1P54792 670 aaPredicted RBP11.64□□□□□ -0.55
COPS3-214ENST00000577246 CDH15P55291 814 aa11.64□□□□□ -0.55
COPS3-214ENST00000577246 FOXG1P55316 489 aaPredicted RBP11.64□□□□□ -0.55
COPS3-214ENST00000577246 ETF1P62495 437 aaKnown RBP11.64□□□□□ -0.55
COPS3-214ENST00000577246 SLC25A3Q00325 362 aa11.64□□□□□ -0.55
COPS3-214ENST00000577246 LIPMQ5VYY2 423 aa11.64□□□□□ -0.55
COPS3-214ENST00000577246 C16orf62Q7Z3J2 963 aa11.64□□□□□ -0.55
COPS3-214ENST00000577246 CCDC103Q8IW40 242 aa11.64□□□□□ -0.55
COPS3-214ENST00000577246 C3orf56Q8N813 242 aa11.64□□□□□ -0.55
COPS3-214ENST00000577246 CCDC63Q8NA47 563 aa11.64□□□□□ -0.55
COPS3-214ENST00000577246 OR7A2PQ8NGA2 310 aa11.64□□□□□ -0.55
COPS3-214ENST00000577246 OR4F15Q8NGB8 312 aa11.64□□□□□ -0.55
COPS3-214ENST00000577246 OR2T11Q8NH01 316 aa11.64□□□□□ -0.55
COPS3-214ENST00000577246 PMM1Q92871 262 aa11.64□□□□□ -0.55
COPS3-214ENST00000577246 DDIT4LQ96D03 193 aa11.64□□□□□ -0.55
COPS3-214ENST00000577246 ARL5BQ96KC2 179 aa11.64□□□□□ -0.55
COPS3-214ENST00000577246 ZNF317Q96PQ6 595 aaPredicted RBP11.64□□□□□ -0.55
COPS3-214ENST00000577246 SOX7Q9BT81 388 aa11.64□□□□□ -0.55
COPS3-214ENST00000577246 PLK3Q9H4B4 646 aa11.64□□□□□ -0.55
COPS3-214ENST00000577246 TNFRSF12AQ9NP84 129 aa11.64□□□□□ -0.55
COPS3-214ENST00000577246 EXD2Q9NVH0 621 aa11.64□□□□□ -0.55
COPS3-214ENST00000577246 EMCNQ9ULC0 261 aa11.64□□□□□ -0.55
COPS3-214ENST00000577246 PYCARDQ9ULZ3 195 aa11.64□□□□□ -0.55
COPS3-214ENST00000577246 PCDHGB4Q9UN71 923 aa11.64□□□□□ -0.55
COPS3-214ENST00000577246 FIS1Q9Y3D6 152 aa11.64□□□□□ -0.55
COPS3-214ENST00000577246 FLVCR1Q9Y5Y0 555 aa11.64□□□□□ -0.55
COPS3-214ENST00000577246 YLPM1P49750 1951 aaKnown RBP11.64□□□□□ -0.55
COPS3-214ENST00000577246 PLCE1Q9P212 2302 aa11.64□□□□□ -0.55
COPS3-214ENST00000577246 IGHV1-18A0A0C4DH31 117 aa11.63□□□□□ -0.55
COPS3-214ENST00000577246 UGT2B17O75795 530 aa11.63□□□□□ -0.55
COPS3-214ENST00000577246 KRT33AO76009 404 aa11.63□□□□□ -0.55
COPS3-214ENST00000577246 C6orf47O95873 294 aa11.63□□□□□ -0.55
COPS3-214ENST00000577246 AGR2O95994 175 aa11.63□□□□□ -0.55
COPS3-214ENST00000577246 PROCP04070 461 aa11.63□□□□□ -0.55
COPS3-214ENST00000577246 LAMP1P11279 417 aa11.63□□□□□ -0.55
COPS3-214ENST00000577246 SOAT1P35610 550 aa11.63□□□□□ -0.55
COPS3-214ENST00000577246 CCT5P48643 541 aa11.63□□□□□ -0.55
COPS3-214ENST00000577246 MAP2K6P52564 334 aa11.63□□□□□ -0.55
COPS3-214ENST00000577246 UBE2NP61088 152 aaKnown RBP11.63□□□□□ -0.55
COPS3-214ENST00000577246 H3F3AP84243 136 aa11.63□□□□□ -0.55
COPS3-214ENST00000577246 ADIPOQQ15848 244 aa11.63□□□□□ -0.55
COPS3-214ENST00000577246 ARHGAP11BQ3KRB8 267 aa11.63□□□□□ -0.55
COPS3-214ENST00000577246 C3orf36Q3SXR2 165 aa11.63□□□□□ -0.55
COPS3-214ENST00000577246 FAM153CQ494X1 144 aa11.63□□□□□ -0.55
COPS3-214ENST00000577246 ATAD3BQ5T9A4 648 aa11.63□□□□□ -0.55
COPS3-214ENST00000577246 TSPO2Q5TGU0 170 aa11.63□□□□□ -0.55
COPS3-214ENST00000577246 SYT10Q6XYQ8 523 aa11.63□□□□□ -0.55
COPS3-214ENST00000577246 DEF8Q6ZN54 512 aa11.63□□□□□ -0.55
COPS3-214ENST00000577246 RINLQ6ZS11 566 aa11.63□□□□□ -0.55
COPS3-214ENST00000577246 TRMT10CQ7L0Y3 403 aaKnown RBP11.63□□□□□ -0.55
COPS3-214ENST00000577246 DDIASQ8IXT1 998 aa11.63□□□□□ -0.55
COPS3-214ENST00000577246 TEX29Q8N6K0 151 aa11.63□□□□□ -0.55
COPS3-214ENST00000577246 OR5D16Q8NGK9 328 aa11.63□□□□□ -0.55
COPS3-214ENST00000577246 ZNF418Q8TF45 676 aaPredicted RBP11.63□□□□□ -0.55
COPS3-214ENST00000577246 ANP32BQ92688 251 aaKnown RBP11.63□□□□□ -0.55
COPS3-214ENST00000577246 TMEM45BQ96B21 275 aa11.63□□□□□ -0.55
COPS3-214ENST00000577246 PPP3R2Q96LZ3 170 aa11.63□□□□□ -0.55
COPS3-214ENST00000577246 SNX18Q96RF0 628 aa11.63□□□□□ -0.55
COPS3-214ENST00000577246 ZNF350Q9GZX5 532 aa11.63□□□□□ -0.55
COPS3-214ENST00000577246 GRPEL1Q9HAV7 217 aa11.63□□□□□ -0.55
COPS3-214ENST00000577246 POLE3Q9NRF9 147 aa11.63□□□□□ -0.55
COPS3-214ENST00000577246 TMEM45AQ9NWC5 275 aa11.63□□□□□ -0.55
COPS3-214ENST00000577246 OXSMQ9NWU1 459 aa11.63□□□□□ -0.55
COPS3-214ENST00000577246 MID2Q9UJV3 735 aa11.63□□□□□ -0.55
COPS3-214ENST00000577246 MKLN1Q9UL63 735 aa11.63□□□□□ -0.55
COPS3-214ENST00000577246 MALRD1Q5VYJ5 2156 aa11.62□□□□□ -0.55
COPS3-214ENST00000577246 B4DSR2 109 aa11.62□□□□□ -0.55
COPS3-214ENST00000577246 KLF11O14901 512 aa11.62□□□□□ -0.55
COPS3-214ENST00000577246 ZNF208O43345 1280 aa11.62□□□□□ -0.55
COPS3-214ENST00000577246 GUSBP08236 651 aa11.62□□□□□ -0.55
COPS3-214ENST00000577246 CPA3P15088 417 aa11.62□□□□□ -0.55
COPS3-214ENST00000577246 CDH2P19022 906 aaPredicted RBP11.62□□□□□ -0.55
COPS3-214ENST00000577246 PRPS1L1P21108 318 aa11.62□□□□□ -0.55
COPS3-214ENST00000577246 MATN1P21941 496 aa11.62□□□□□ -0.55
COPS3-214ENST00000577246 RYKP34925 604 aa11.62□□□□□ -0.55
COPS3-214ENST00000577246 PGM1P36871 562 aa11.62□□□□□ -0.55
COPS3-214ENST00000577246 SLC17A1Q14916 467 aa11.62□□□□□ -0.55
COPS3-214ENST00000577246 FAM174BQ3ZCQ3 159 aa11.62□□□□□ -0.55
COPS3-214ENST00000577246 HIKESHIQ53FT3 197 aa11.62□□□□□ -0.55
COPS3-214ENST00000577246 KANK2Q63ZY3 851 aa11.62□□□□□ -0.55
COPS3-214ENST00000577246 SHQ1Q6PI26 577 aaKnown RBP11.62□□□□□ -0.55
COPS3-214ENST00000577246 VHLLQ6RSH7 139 aa11.62□□□□□ -0.55
COPS3-214ENST00000577246 PAQR6Q6TCH4 344 aa11.62□□□□□ -0.55
COPS3-214ENST00000577246 GLCCI1Q86VQ1 547 aa11.62□□□□□ -0.55
COPS3-214ENST00000577246 ZNF786Q8N393 782 aa11.62□□□□□ -0.55
COPS3-214ENST00000577246 ARFGAP2Q8N6H7 521 aa11.62□□□□□ -0.55
COPS3-214ENST00000577246 FAM71CQ8NEG0 241 aa11.62□□□□□ -0.55
COPS3-214ENST00000577246 SEMA6DQ8NFY4 1073 aa11.62□□□□□ -0.55
COPS3-214ENST00000577246 OR5AK3PQ8NH89 298 aa11.62□□□□□ -0.55
COPS3-214ENST00000577246 WDR60Q8WVS4 1066 aa11.62□□□□□ -0.55
COPS3-214ENST00000577246 GCDHQ92947 438 aaPredicted RBP11.62□□□□□ -0.55
COPS3-214ENST00000577246 ANKRD27Q96NW4 1050 aa11.62□□□□□ -0.55
COPS3-214ENST00000577246 SF3B5Q9BWJ5 86 aaKnown RBP11.62□□□□□ -0.55
COPS3-214ENST00000577246 OR11A1Q9GZK7 315 aa11.62□□□□□ -0.55
COPS3-214ENST00000577246 PIF1Q9H611 641 aa11.62□□□□□ -0.55
COPS3-214ENST00000577246 METTL17Q9H7H0 456 aaPredicted RBP11.62□□□□□ -0.55
COPS3-214ENST00000577246 ZNF442Q9H7R0 627 aa11.62□□□□□ -0.55
COPS3-214ENST00000577246 EXOSC3Q9NQT5 275 aaKnown RBP11.62□□□□□ -0.55
COPS3-214ENST00000577246 DNAJC15Q9Y5T4 150 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms