RNA–Protein interactions for RNA: ENST00000575176.5

SMG6-216, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-216ENST00000575176 UGT2B10P36537 528 aa7.7□□□□□ -1.18
SMG6-216ENST00000575176 CD79BP40259 229 aa7.7□□□□□ -1.18
SMG6-216ENST00000575176 POLR2HP52434 150 aaKnown RBP7.7□□□□□ -1.18
SMG6-216ENST00000575176 CARD18P57730 90 aa7.7□□□□□ -1.18
SMG6-216ENST00000575176 BNIP2Q12982 314 aa7.7□□□□□ -1.18
SMG6-216ENST00000575176 NFYCQ13952 458 aa7.7□□□□□ -1.18
SMG6-216ENST00000575176 DUSP7Q16829 419 aa7.7□□□□□ -1.18
SMG6-216ENST00000575176 REEP3Q6NUK4 255 aa7.7□□□□□ -1.18
SMG6-216ENST00000575176 NHLRC1Q6VVB1 395 aa7.7□□□□□ -1.18
SMG6-216ENST00000575176 CCDC80Q76M96 950 aa7.7□□□□□ -1.18
SMG6-216ENST00000575176 WDFY1Q8IWB7 410 aa7.7□□□□□ -1.18
SMG6-216ENST00000575176 TUSC5Q8IXB3 177 aa7.7□□□□□ -1.18
SMG6-216ENST00000575176 POU5F2Q8N7G0 328 aa7.7□□□□□ -1.18
SMG6-216ENST00000575176 LSMEM1Q8N8F7 131 aa7.7□□□□□ -1.18
SMG6-216ENST00000575176 ZIC4Q8N9L1 334 aa7.7□□□□□ -1.18
SMG6-216ENST00000575176 HIPK4Q8NE63 616 aa7.7□□□□□ -1.18
SMG6-216ENST00000575176 OR8J3Q8NGG0 315 aa7.7□□□□□ -1.18
SMG6-216ENST00000575176 LINC01560Q8TB33 94 aa7.7□□□□□ -1.18
SMG6-216ENST00000575176 FAM222BQ8WU58 562 aa7.7□□□□□ -1.18
SMG6-216ENST00000575176 IGFBPL1Q8WX77 278 aa7.7□□□□□ -1.18
SMG6-216ENST00000575176 TMEM234Q8WY98 164 aa7.7□□□□□ -1.18
SMG6-216ENST00000575176 LRRC58Q96CX6 371 aa7.7□□□□□ -1.18
SMG6-216ENST00000575176 ZNF583Q96ND8 569 aa7.7□□□□□ -1.18
SMG6-216ENST00000575176 HS3ST6Q96QI5 342 aa7.7□□□□□ -1.18
SMG6-216ENST00000575176 OR5B2Q96R09 309 aa7.7□□□□□ -1.18
SMG6-216ENST00000575176 ZNF426Q9BUY5 554 aa7.7□□□□□ -1.18
SMG6-216ENST00000575176 PRR14Q9BWN1 585 aa7.7□□□□□ -1.18
SMG6-216ENST00000575176 PCDHAC1Q9H158 963 aa7.7□□□□□ -1.18
SMG6-216ENST00000575176 LIME1Q9H400 295 aa7.7□□□□□ -1.18
SMG6-216ENST00000575176 PLEKHF2Q9H8W4 249 aa7.7□□□□□ -1.18
SMG6-216ENST00000575176 RASSF1Q9NS23 344 aa7.7□□□□□ -1.18
SMG6-216ENST00000575176 CMTM6Q9NX76 183 aa7.7□□□□□ -1.18
SMG6-216ENST00000575176 B3GAT1Q9P2W7 334 aa7.7□□□□□ -1.18
SMG6-216ENST00000575176 SEC14L4Q9UDX3 406 aa7.7□□□□□ -1.18
SMG6-216ENST00000575176 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.7□□□□□ -1.18
SMG6-216ENST00000575176 MCTS1Q9ULC4 181 aaKnown RBP7.7□□□□□ -1.18
SMG6-216ENST00000575176 ACANP16112 2415 aa7.7□□□□□ -1.18
SMG6-216ENST00000575176 ANK3Q12955 4377 aaKnown RBP7.69□□□□□ -1.18
SMG6-216ENST00000575176 ALPK2Q86TB3 2170 aa7.69□□□□□ -1.18
SMG6-216ENST00000575176 A0A1B0GWA3 101 aa7.69□□□□□ -1.18
SMG6-216ENST00000575176 SH3D21A4FU49 640 aa7.69□□□□□ -1.18
SMG6-216ENST00000575176 LIPT2A6NK58 231 aa7.69□□□□□ -1.18
SMG6-216ENST00000575176 GJE1A6NN92 205 aa7.69□□□□□ -1.18
SMG6-216ENST00000575176 ZNF724A8MTY0 619 aa7.69□□□□□ -1.18
SMG6-216ENST00000575176 BBIP1A8MTZ0 92 aa7.69□□□□□ -1.18
SMG6-216ENST00000575176 MRASO14807 208 aa7.69□□□□□ -1.18
SMG6-216ENST00000575176 ANGPT2O15123 496 aa7.69□□□□□ -1.18
SMG6-216ENST00000575176 SNX3O60493 162 aa7.69□□□□□ -1.18
SMG6-216ENST00000575176 OPN1SWP03999 348 aa7.69□□□□□ -1.18
SMG6-216ENST00000575176 VIMP08670 466 aaKnown RBP7.69□□□□□ -1.18
SMG6-216ENST00000575176 ADSLP30566 484 aaPredicted RBP7.69□□□□□ -1.18
SMG6-216ENST00000575176 CPOXP36551 454 aa7.69□□□□□ -1.18
SMG6-216ENST00000575176 KIR2DL3P43628 341 aa7.69□□□□□ -1.18
SMG6-216ENST00000575176 OR3A2P47893 321 aa7.69□□□□□ -1.18
SMG6-216ENST00000575176 CLK1P49759 484 aaKnown RBP7.69□□□□□ -1.18
SMG6-216ENST00000575176 FOXG1P55316 489 aaPredicted RBP7.69□□□□□ -1.18
SMG6-216ENST00000575176 RBBP4Q09028 425 aa7.69□□□□□ -1.18
SMG6-216ENST00000575176 PDK3Q15120 406 aa7.69□□□□□ -1.18
SMG6-216ENST00000575176 RNPS1Q15287 305 aaKnown RBP7.69□□□□□ -1.18
SMG6-216ENST00000575176 ZNF311Q5JNZ3 666 aa7.69□□□□□ -1.18
SMG6-216ENST00000575176 WBP2NLQ6ICG8 309 aa7.69□□□□□ -1.18
SMG6-216ENST00000575176 LINC00114Q6XXX2 140 aa7.69□□□□□ -1.18
SMG6-216ENST00000575176 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.69□□□□□ -1.18
SMG6-216ENST00000575176 ZNF550Q7Z398 422 aa7.69□□□□□ -1.18
SMG6-216ENST00000575176 P4HA3Q7Z4N8 544 aa7.69□□□□□ -1.18
SMG6-216ENST00000575176 RBM45Q8IUH3 476 aaKnown RBP7.69□□□□□ -1.18
SMG6-216ENST00000575176 CCDC103Q8IW40 242 aa7.69□□□□□ -1.18
SMG6-216ENST00000575176 ZNF440Q8IYI8 595 aa7.69□□□□□ -1.18
SMG6-216ENST00000575176 ATP6V1C2Q8NEY4 427 aa7.69□□□□□ -1.18
SMG6-216ENST00000575176 OR10A6Q8NH74 314 aa7.69□□□□□ -1.18
SMG6-216ENST00000575176 RCN3Q96D15 328 aa7.69□□□□□ -1.18
SMG6-216ENST00000575176 WFIKKN1Q96NZ8 548 aa7.69□□□□□ -1.18
SMG6-216ENST00000575176 GLRX2Q9NS18 164 aa7.69□□□□□ -1.18
SMG6-216ENST00000575176 ABCD2Q9UBJ2 740 aa7.69□□□□□ -1.18
SMG6-216ENST00000575176 PRSS50Q9UI38 385 aa7.69□□□□□ -1.18
SMG6-216ENST00000575176 CORO2BQ9UQ03 480 aa7.69□□□□□ -1.18
SMG6-216ENST00000575176 TRAPPC4Q9Y296 219 aa7.69□□□□□ -1.18
SMG6-216ENST00000575176 IFT52Q9Y366 437 aa7.69□□□□□ -1.18
SMG6-216ENST00000575176 HDGFL3Q9Y3E1 203 aa7.69□□□□□ -1.18
SMG6-216ENST00000575176 CAPN7Q9Y6W3 813 aa7.69□□□□□ -1.18
SMG6-216ENST00000575176 DSCAMO60469 2012 aa7.68□□□□□ -1.18
SMG6-216ENST00000575176 AQP7P3A6NL99 342 aa7.68□□□□□ -1.18
SMG6-216ENST00000575176 M0R3H8 397 aa7.68□□□□□ -1.18
SMG6-216ENST00000575176 NME4O00746 187 aa7.68□□□□□ -1.18
SMG6-216ENST00000575176 SMNDC1O75940 238 aaKnown RBP eCLIP7.68□□□□□ -1.18
SMG6-216ENST00000575176 LGI1O95970 557 aa7.68□□□□□ -1.18
SMG6-216ENST00000575176 EPXP11678 715 aa7.68□□□□□ -1.18
SMG6-216ENST00000575176 PSMB1P20618 241 aaKnown RBP7.68□□□□□ -1.18
SMG6-216ENST00000575176 CRYGSP22914 178 aa7.68□□□□□ -1.18
SMG6-216ENST00000575176 SLC7A1P30825 629 aa7.68□□□□□ -1.18
SMG6-216ENST00000575176 HTR3AP46098 478 aa7.68□□□□□ -1.18
SMG6-216ENST00000575176 KCNJ5P48544 419 aa7.68□□□□□ -1.18
SMG6-216ENST00000575176 LTBQ06643 244 aa7.68□□□□□ -1.18
SMG6-216ENST00000575176 SLC17A1Q14916 467 aa7.68□□□□□ -1.18
SMG6-216ENST00000575176 LARS2Q15031 903 aaKnown RBP7.68□□□□□ -1.18
SMG6-216ENST00000575176 SGCBQ16585 318 aa7.68□□□□□ -1.18
SMG6-216ENST00000575176 FXNQ16595 210 aa7.68□□□□□ -1.18
SMG6-216ENST00000575176 ZSWIM7Q19AV6 140 aa7.68□□□□□ -1.18
SMG6-216ENST00000575176 VMACQ2NL98 169 aa7.68□□□□□ -1.18
SMG6-216ENST00000575176 HSP90B2PQ58FF3 399 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms