RNA–Protein interactions for RNA: ENST00000569422.1

LINC00558-201, long intergenic non-protein coding RNA 558, humanhuman

TSL 1 (best) BASIC

Gene LINC00558, Length 3,163 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00558-201ENST00000569422 GALEQ14376 348 aa8.07□□□□□ -1.12
LINC00558-201ENST00000569422 EOGTQ5NDL2 527 aa8.07□□□□□ -1.12
LINC00558-201ENST00000569422 SNAP47Q5SQN1 464 aa8.07□□□□□ -1.12
LINC00558-201ENST00000569422 ATAD3CQ5T2N8 411 aa8.07□□□□□ -1.12
LINC00558-201ENST00000569422 RNLSQ5VYX0 342 aa8.07□□□□□ -1.12
LINC00558-201ENST00000569422 XKRXQ6PP77 449 aa8.07□□□□□ -1.12
LINC00558-201ENST00000569422 MCATQ8IVS2 390 aaKnown RBP8.07□□□□□ -1.12
LINC00558-201ENST00000569422 ZBTB44Q8NCP5 570 aa8.07□□□□□ -1.12
LINC00558-201ENST00000569422 C17orf47Q8NEP4 570 aa8.07□□□□□ -1.12
LINC00558-201ENST00000569422 OR5W2Q8NH69 310 aa8.07□□□□□ -1.12
LINC00558-201ENST00000569422 NR4A3Q92570 626 aa8.07□□□□□ -1.12
LINC00558-201ENST00000569422 FAM131CQ96AQ9 280 aa8.07□□□□□ -1.12
LINC00558-201ENST00000569422 ORAI1Q96D31 301 aa8.07□□□□□ -1.12
LINC00558-201ENST00000569422 DEPDC7Q96QD5 511 aa8.07□□□□□ -1.12
LINC00558-201ENST00000569422 FYTTD1Q96QD9 318 aaKnown RBP8.07□□□□□ -1.12
LINC00558-201ENST00000569422 ATF6BQ99941 703 aa8.07□□□□□ -1.12
LINC00558-201ENST00000569422 HOXD1Q9GZZ0 328 aa8.07□□□□□ -1.12
LINC00558-201ENST00000569422 TP63Q9H3D4 680 aaPredicted RBP8.07□□□□□ -1.12
LINC00558-201ENST00000569422 UCK1Q9HA47 277 aa8.07□□□□□ -1.12
LINC00558-201ENST00000569422 LYRM4Q9HD34 91 aa8.07□□□□□ -1.12
LINC00558-201ENST00000569422 POT1Q9NUX5 634 aa8.07□□□□□ -1.12
LINC00558-201ENST00000569422 MRPS18AQ9NVS2 196 aaKnown RBP8.07□□□□□ -1.12
LINC00558-201ENST00000569422 SIGLEC7Q9Y286 467 aa8.07□□□□□ -1.12
LINC00558-201ENST00000569422 SESN1Q9Y6P5 492 aa8.07□□□□□ -1.12
LINC00558-201ENST00000569422 ALPK2Q86TB3 2170 aa8.07□□□□□ -1.12
LINC00558-201ENST00000569422 OR5K3A6NET4 321 aa8.07□□□□□ -1.12
LINC00558-201ENST00000569422 C2CD4DB7Z1M9 353 aa8.07□□□□□ -1.12
LINC00558-201ENST00000569422 PRAMEF26H0Y7S4 382 aa8.07□□□□□ -1.12
LINC00558-201ENST00000569422 TGFBR3LH3BV60 316 aa8.07□□□□□ -1.12
LINC00558-201ENST00000569422 SOX30O94993 753 aa8.07□□□□□ -1.12
LINC00558-201ENST00000569422 THBS1P07996 1170 aa8.07□□□□□ -1.12
LINC00558-201ENST00000569422 TCEA1P23193 301 aaKnown RBP8.07□□□□□ -1.12
LINC00558-201ENST00000569422 HOXA6P31267 233 aa8.07□□□□□ -1.12
LINC00558-201ENST00000569422 RABIFP47224 123 aa8.07□□□□□ -1.12
LINC00558-201ENST00000569422 DIO1P49895 249 aa8.07□□□□□ -1.12
LINC00558-201ENST00000569422 FZD2Q14332 565 aa8.07□□□□□ -1.12
LINC00558-201ENST00000569422 VASNQ6EMK4 673 aa8.07□□□□□ -1.12
LINC00558-201ENST00000569422 RAB12Q6IQ22 244 aa8.07□□□□□ -1.12
LINC00558-201ENST00000569422 ZNF544Q6NX49 715 aa8.07□□□□□ -1.12
LINC00558-201ENST00000569422 MTFR2Q6P444 385 aa8.07□□□□□ -1.12
LINC00558-201ENST00000569422 LYPD4Q6UWN0 246 aa8.07□□□□□ -1.12
LINC00558-201ENST00000569422 BEND4Q6ZU67 534 aa8.07□□□□□ -1.12
LINC00558-201ENST00000569422 RFPL4BQ6ZWI9 263 aa8.07□□□□□ -1.12
LINC00558-201ENST00000569422 SSX6Q7RTT6 188 aa8.07□□□□□ -1.12
LINC00558-201ENST00000569422 GALNTL5Q7Z4T8 443 aa8.07□□□□□ -1.12
LINC00558-201ENST00000569422 CEACAM19Q7Z692 300 aa8.07□□□□□ -1.12
LINC00558-201ENST00000569422 UBQLNLQ8IYU4 475 aa8.07□□□□□ -1.12
LINC00558-201ENST00000569422 SLC44A3Q8N4M1 653 aa8.07□□□□□ -1.12
LINC00558-201ENST00000569422 ZNF485Q8NCK3 441 aa8.07□□□□□ -1.12
LINC00558-201ENST00000569422 RCBTB1Q8NDN9 531 aa8.07□□□□□ -1.12
LINC00558-201ENST00000569422 OR4C3Q8NH37 302 aa8.07□□□□□ -1.12
LINC00558-201ENST00000569422 MSLNLQ96KJ4 702 aa8.07□□□□□ -1.12
LINC00558-201ENST00000569422 ZNF649Q9BS31 505 aa8.07□□□□□ -1.12
LINC00558-201ENST00000569422 SLC22A4Q9H015 551 aa8.07□□□□□ -1.12
LINC00558-201ENST00000569422 FOLH1BQ9HBA9 442 aa8.07□□□□□ -1.12
LINC00558-201ENST00000569422 MBD2Q9UBB5 411 aa8.07□□□□□ -1.12
LINC00558-201ENST00000569422 EXTL2Q9UBQ6 330 aa8.07□□□□□ -1.12
LINC00558-201ENST00000569422 ZNF223Q9UK11 482 aaPredicted RBP8.07□□□□□ -1.12
LINC00558-201ENST00000569422 TRAPPC4Q9Y296 219 aa8.07□□□□□ -1.12
LINC00558-201ENST00000569422 PLA2G10O15496 165 aa8.06□□□□□ -1.12
LINC00558-201ENST00000569422 IDH3BO43837 385 aa8.06□□□□□ -1.12
LINC00558-201ENST00000569422 IL9P15248 144 aa8.06□□□□□ -1.12
LINC00558-201ENST00000569422 LTBRP36941 435 aa8.06□□□□□ -1.12
LINC00558-201ENST00000569422 KIR2DL3P43628 341 aa8.06□□□□□ -1.12
LINC00558-201ENST00000569422 PCP4P48539 62 aa8.06□□□□□ -1.12
LINC00558-201ENST00000569422 YPEL5P62699 121 aa8.06□□□□□ -1.12
LINC00558-201ENST00000569422 MRPS21P82921 87 aaKnown RBP8.06□□□□□ -1.12
LINC00558-201ENST00000569422 GPR50Q13585 617 aa8.06□□□□□ -1.12
LINC00558-201ENST00000569422 LCN1P1Q5VSP4 162 aa8.06□□□□□ -1.12
LINC00558-201ENST00000569422 PRAMEF17Q5VTA0 474 aa8.06□□□□□ -1.12
LINC00558-201ENST00000569422 NKAIN2Q5VXU1 208 aa8.06□□□□□ -1.12
LINC00558-201ENST00000569422 SHEQ5VZ18 495 aa8.06□□□□□ -1.12
LINC00558-201ENST00000569422 TMEM184AQ6ZMB5 413 aa8.06□□□□□ -1.12
LINC00558-201ENST00000569422 NR2C2APQ86WQ0 139 aa8.06□□□□□ -1.12
LINC00558-201ENST00000569422 OR5M3Q8NGP4 307 aa8.06□□□□□ -1.12
LINC00558-201ENST00000569422 OR6K6Q8NGW6 343 aa8.06□□□□□ -1.12
LINC00558-201ENST00000569422 GPBAR1Q8TDU6 330 aa8.06□□□□□ -1.12
LINC00558-201ENST00000569422 SMPDL3BQ92485 455 aa8.06□□□□□ -1.12
LINC00558-201ENST00000569422 NECTIN4Q96NY8 510 aa8.06□□□□□ -1.12
LINC00558-201ENST00000569422 TGM7Q96PF1 710 aa8.06□□□□□ -1.12
LINC00558-201ENST00000569422 RNF32Q9H0A6 362 aa8.06□□□□□ -1.12
LINC00558-201ENST00000569422 RANGRFQ9HD47 186 aaPredicted RBP8.06□□□□□ -1.12
LINC00558-201ENST00000569422 B3GAT2Q9NPZ5 323 aa8.06□□□□□ -1.12
LINC00558-201ENST00000569422 NTMQ9P121 344 aa8.06□□□□□ -1.12
LINC00558-201ENST00000569422 ZNF346Q9UL40 294 aaKnown RBP8.06□□□□□ -1.12
LINC00558-201ENST00000569422 PCDHGB2Q9Y5G2 931 aa8.06□□□□□ -1.12
LINC00558-201ENST00000569422 IER3IP1Q9Y5U9 82 aa8.06□□□□□ -1.12
LINC00558-201ENST00000569422 A0A1B0GVT2 93 aa8.06□□□□□ -1.12
LINC00558-201ENST00000569422 C4orf47A7E2U8 309 aa8.06□□□□□ -1.12
LINC00558-201ENST00000569422 NOTOA8MTQ0 251 aa8.06□□□□□ -1.12
LINC00558-201ENST00000569422 BLOC1S5-TXNDC5H3BN57 136 aa8.06□□□□□ -1.12
LINC00558-201ENST00000569422 UBE2IP63279 158 aaKnown RBP8.06□□□□□ -1.12
LINC00558-201ENST00000569422 FZD5Q13467 585 aa8.06□□□□□ -1.12
LINC00558-201ENST00000569422 KCNAB1Q14722 419 aa8.06□□□□□ -1.12
LINC00558-201ENST00000569422 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.06□□□□□ -1.12
LINC00558-201ENST00000569422 GFOD2Q3B7J2 385 aa8.06□□□□□ -1.12
LINC00558-201ENST00000569422 ZFP69Q49AA0 526 aa8.06□□□□□ -1.12
LINC00558-201ENST00000569422 OTPQ5XKR4 325 aa8.06□□□□□ -1.12
LINC00558-201ENST00000569422 PLET1Q6UQ28 207 aa8.06□□□□□ -1.12
LINC00558-201ENST00000569422 GID4Q8IVV7 300 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms