RNA–Protein interactions for RNA: ENST00000569080.1

CDH3-209, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 291 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-209ENST00000569080 ADAM19Q9H013 955 aa6.92□□□□□ -1.3
CDH3-209ENST00000569080 IKZF5Q9H5V7 419 aa6.92□□□□□ -1.3
CDH3-209ENST00000569080 RMND5AQ9H871 391 aa6.92□□□□□ -1.3
CDH3-209ENST00000569080 MTHFD2LQ9H903 347 aaPredicted RBP6.92□□□□□ -1.3
CDH3-209ENST00000569080 UBTD1Q9HAC8 227 aa6.92□□□□□ -1.3
CDH3-209ENST00000569080 BCL2L10Q9HD36 194 aa6.92□□□□□ -1.3
CDH3-209ENST00000569080 A4GALTQ9NPC4 353 aa6.92□□□□□ -1.3
CDH3-209ENST00000569080 SERINC1Q9NRX5 453 aa6.92□□□□□ -1.3
CDH3-209ENST00000569080 MALT1Q9UDY8 824 aa6.92□□□□□ -1.3
CDH3-209ENST00000569080 TRAPPC4Q9Y296 219 aa6.92□□□□□ -1.3
CDH3-209ENST00000569080 TMED7Q9Y3B3 224 aa6.92□□□□□ -1.3
CDH3-209ENST00000569080 SPIN1Q9Y657 262 aaPredicted RBP6.92□□□□□ -1.3
CDH3-209ENST00000569080 ANK3Q12955 4377 aaKnown RBP6.92□□□□□ -1.3
CDH3-209ENST00000569080 HMGB1P1B2RPK0 211 aaPredicted RBP6.91□□□□□ -1.3
CDH3-209ENST00000569080 TMEM229AB2RXF0 380 aa6.91□□□□□ -1.3
CDH3-209ENST00000569080 PDLIM1O00151 329 aa6.91□□□□□ -1.3
CDH3-209ENST00000569080 NR5A2O00482 541 aa6.91□□□□□ -1.3
CDH3-209ENST00000569080 POLR3GO15318 223 aaPredicted RBP6.91□□□□□ -1.3
CDH3-209ENST00000569080 FRS3O43559 492 aa6.91□□□□□ -1.3
CDH3-209ENST00000569080 FZD7O75084 574 aa6.91□□□□□ -1.3
CDH3-209ENST00000569080 NPIPB7O75200 414 aa6.91□□□□□ -1.3
CDH3-209ENST00000569080 LYZL6O75951 148 aa6.91□□□□□ -1.3
CDH3-209ENST00000569080 GKN3PP0CG01 181 aa6.91□□□□□ -1.3
CDH3-209ENST00000569080 TFPIP10646 304 aa6.91□□□□□ -1.3
CDH3-209ENST00000569080 PAX1P15863 534 aa6.91□□□□□ -1.3
CDH3-209ENST00000569080 IL7RP16871 459 aa6.91□□□□□ -1.3
CDH3-209ENST00000569080 IL32P24001 234 aa6.91□□□□□ -1.3
CDH3-209ENST00000569080 FKBP2P26885 142 aaKnown RBP6.91□□□□□ -1.3
CDH3-209ENST00000569080 CRATP43155 626 aa6.91□□□□□ -1.3
CDH3-209ENST00000569080 HTR3AP46098 478 aa6.91□□□□□ -1.3
CDH3-209ENST00000569080 ATP4BP51164 291 aa6.91□□□□□ -1.3
CDH3-209ENST00000569080 P2RY4P51582 365 aa6.91□□□□□ -1.3
CDH3-209ENST00000569080 AQP5P55064 265 aa6.91□□□□□ -1.3
CDH3-209ENST00000569080 FADDQ13158 208 aa6.91□□□□□ -1.3
CDH3-209ENST00000569080 ITGADQ13349 1161 aa6.91□□□□□ -1.3
CDH3-209ENST00000569080 PAGE3Q5JUK9 113 aa6.91□□□□□ -1.3
CDH3-209ENST00000569080 Q5PR19 223 aa6.91□□□□□ -1.3
CDH3-209ENST00000569080 NCMAPQ5T1S8 102 aa6.91□□□□□ -1.3
CDH3-209ENST00000569080 PRAMEF8Q5VWM4 474 aa6.91□□□□□ -1.3
CDH3-209ENST00000569080 PRAMEF7Q5VXH5 474 aa6.91□□□□□ -1.3
CDH3-209ENST00000569080 ADAM5Q6NVV9 412 aa6.91□□□□□ -1.3
CDH3-209ENST00000569080 GALNT5Q7Z7M9 940 aa6.91□□□□□ -1.3
CDH3-209ENST00000569080 SERPINA11Q86U17 422 aa6.91□□□□□ -1.3
CDH3-209ENST00000569080 CCDC103Q8IW40 242 aa6.91□□□□□ -1.3
CDH3-209ENST00000569080 PEX5LQ8IYB4 626 aa6.91□□□□□ -1.3
CDH3-209ENST00000569080 CLIP4Q8N3C7 705 aa6.91□□□□□ -1.3
CDH3-209ENST00000569080 PIGXQ8TBF5 258 aa6.91□□□□□ -1.3
CDH3-209ENST00000569080 C3orf49Q96BT1 292 aa6.91□□□□□ -1.3
CDH3-209ENST00000569080 ZNF775Q96BV0 537 aaPredicted RBP6.91□□□□□ -1.3
CDH3-209ENST00000569080 SPDL1Q96EA4 605 aa6.91□□□□□ -1.3
CDH3-209ENST00000569080 CCL19Q99731 98 aa6.91□□□□□ -1.3
CDH3-209ENST00000569080 HDHD5Q9BXW7 423 aa6.91□□□□□ -1.3
CDH3-209ENST00000569080 VIPAS39Q9H9C1 493 aa6.91□□□□□ -1.3
CDH3-209ENST00000569080 FANCFQ9NPI8 374 aa6.91□□□□□ -1.3
CDH3-209ENST00000569080 TMEM45AQ9NWC5 275 aa6.91□□□□□ -1.3
CDH3-209ENST00000569080 NPAP1Q9NZP6 1156 aa6.91□□□□□ -1.3
CDH3-209ENST00000569080 CALML5Q9NZT1 146 aa6.91□□□□□ -1.3
CDH3-209ENST00000569080 CCDC167Q9P0B6 97 aa6.91□□□□□ -1.3
CDH3-209ENST00000569080 VAPAQ9P0L0 249 aa6.91□□□□□ -1.3
CDH3-209ENST00000569080 TMEM181Q9P2C4 612 aa6.91□□□□□ -1.3
CDH3-209ENST00000569080 FLVCR1Q9Y5Y0 555 aa6.91□□□□□ -1.3
CDH3-209ENST00000569080 USF3Q68DE3 2245 aa6.91□□□□□ -1.3
CDH3-209ENST00000569080 PLCE1Q9P212 2302 aa6.9□□□□□ -1.3
CDH3-209ENST00000569080 A0A0G2JPF8 293 aa6.9□□□□□ -1.3
CDH3-209ENST00000569080 LIPT2A6NK58 231 aa6.9□□□□□ -1.3
CDH3-209ENST00000569080 HNRNPCL2B2RXH8 293 aa6.9□□□□□ -1.3
CDH3-209ENST00000569080 HNRNPCL3B7ZW38 293 aa6.9□□□□□ -1.3
CDH3-209ENST00000569080 CLIC1O00299 241 aa6.9□□□□□ -1.3
CDH3-209ENST00000569080 HS3ST1O14792 307 aa6.9□□□□□ -1.3
CDH3-209ENST00000569080 HNRNPCL1O60812 293 aaKnown RBP6.9□□□□□ -1.3
CDH3-209ENST00000569080 PGM3O95394 542 aa6.9□□□□□ -1.3
CDH3-209ENST00000569080 ANP32DO95626 131 aa6.9□□□□□ -1.3
CDH3-209ENST00000569080 ITGA5P08648 1049 aa6.9□□□□□ -1.3
CDH3-209ENST00000569080 HNRNPCL4P0DMR1 293 aa6.9□□□□□ -1.3
CDH3-209ENST00000569080 ARAFP10398 606 aa6.9□□□□□ -1.3
CDH3-209ENST00000569080 FOSL1P15407 271 aa6.9□□□□□ -1.3
CDH3-209ENST00000569080 CCNA2P20248 432 aa6.9□□□□□ -1.3
CDH3-209ENST00000569080 FPR1P21462 350 aa6.9□□□□□ -1.3
CDH3-209ENST00000569080 ADSLP30566 484 aaPredicted RBP6.9□□□□□ -1.3
CDH3-209ENST00000569080 MAP2K6P52564 334 aa6.9□□□□□ -1.3
CDH3-209ENST00000569080 FOXG1P55316 489 aaPredicted RBP6.9□□□□□ -1.3
CDH3-209ENST00000569080 STX1BP61266 288 aa6.9□□□□□ -1.3
CDH3-209ENST00000569080 PPP2R2AP63151 447 aa6.9□□□□□ -1.3
CDH3-209ENST00000569080 NKX6-1P78426 367 aaPredicted RBP6.9□□□□□ -1.3
CDH3-209ENST00000569080 GNA13Q14344 377 aa6.9□□□□□ -1.3
CDH3-209ENST00000569080 SQLEQ14534 574 aa6.9□□□□□ -1.3
CDH3-209ENST00000569080 SLC17A1Q14916 467 aa6.9□□□□□ -1.3
CDH3-209ENST00000569080 ADRM1Q16186 407 aa6.9□□□□□ -1.3
CDH3-209ENST00000569080 FBXW9Q5XUX1 488 aa6.9□□□□□ -1.3
CDH3-209ENST00000569080 PAQR6Q6TCH4 344 aa6.9□□□□□ -1.3
CDH3-209ENST00000569080 C6orf89Q6UWU4 347 aa6.9□□□□□ -1.3
CDH3-209ENST00000569080 DLEU7Q6UYE1 221 aa6.9□□□□□ -1.3
CDH3-209ENST00000569080 BHLHA15Q7RTS1 189 aaPredicted RBP6.9□□□□□ -1.3
CDH3-209ENST00000569080 ZNF440Q8IYI8 595 aa6.9□□□□□ -1.3
CDH3-209ENST00000569080 ZNF433Q8N7K0 673 aaPredicted RBP6.9□□□□□ -1.3
CDH3-209ENST00000569080 GOLGA6L1Q8N7Z2 621 aa6.9□□□□□ -1.3
CDH3-209ENST00000569080 ZNF611Q8N823 705 aa6.9□□□□□ -1.3
CDH3-209ENST00000569080 ZIC4Q8N9L1 334 aa6.9□□□□□ -1.3
CDH3-209ENST00000569080 BBS10Q8TAM1 723 aa6.9□□□□□ -1.3
CDH3-209ENST00000569080 CKAP2Q8WWK9 683 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms