RNA–Protein interactions for RNA: ENST00000569046.1

HMGB1P6-201, Transcript of high mobility group box 1 pseudogene 6, humanhuman

BASIC

Gene HMGB1P6, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P6-201ENST00000569046 Q6ZSR6 202 aa2.83□□□□□ -1.96
HMGB1P6-201ENST00000569046 CDHR3Q6ZTQ4 885 aa2.83□□□□□ -1.96
HMGB1P6-201ENST00000569046 COX8CQ7Z4L0 72 aa2.83□□□□□ -1.96
HMGB1P6-201ENST00000569046 PTAR1Q7Z6K3 402 aaPredicted RBP2.83□□□□□ -1.96
HMGB1P6-201ENST00000569046 SLC22A18ASQ8N1D0 253 aa2.83□□□□□ -1.96
HMGB1P6-201ENST00000569046 SLC43A2Q8N370 569 aa2.83□□□□□ -1.96
HMGB1P6-201ENST00000569046 PRSS35Q8N3Z0 413 aa2.83□□□□□ -1.96
HMGB1P6-201ENST00000569046 ARL14Q8N4G2 192 aa2.83□□□□□ -1.96
HMGB1P6-201ENST00000569046 TMEM99Q8N816 258 aa2.83□□□□□ -1.96
HMGB1P6-201ENST00000569046 Q8N9G6 341 aaPredicted RBP2.83□□□□□ -1.96
HMGB1P6-201ENST00000569046 OR4L1Q8NH43 312 aa2.83□□□□□ -1.96
HMGB1P6-201ENST00000569046 WDR36Q8NI36 951 aaKnown RBP2.83□□□□□ -1.96
HMGB1P6-201ENST00000569046 PNPT1Q8TCS8 783 aaKnown RBP2.83□□□□□ -1.96
HMGB1P6-201ENST00000569046 P3H4Q92791 437 aa2.83□□□□□ -1.96
HMGB1P6-201ENST00000569046 NT5C3BQ969T7 300 aa2.83□□□□□ -1.96
HMGB1P6-201ENST00000569046 SLC41A3Q96GZ6 507 aa2.83□□□□□ -1.96
HMGB1P6-201ENST00000569046 BMFQ96LC9 184 aa2.83□□□□□ -1.96
HMGB1P6-201ENST00000569046 LINC00479Q96M42 142 aa2.83□□□□□ -1.96
HMGB1P6-201ENST00000569046 PRICKLE1Q96MT3 831 aaPredicted RBP2.83□□□□□ -1.96
HMGB1P6-201ENST00000569046 URM1Q9BTM9 101 aaKnown RBP2.83□□□□□ -1.96
HMGB1P6-201ENST00000569046 FUCA2Q9BTY2 467 aa2.83□□□□□ -1.96
HMGB1P6-201ENST00000569046 ULBP1Q9BZM6 244 aa2.83□□□□□ -1.96
HMGB1P6-201ENST00000569046 MIS12Q9H081 205 aa2.83□□□□□ -1.96
HMGB1P6-201ENST00000569046 SHARPINQ9H0F6 387 aa2.83□□□□□ -1.96
HMGB1P6-201ENST00000569046 WWP1Q9H0M0 922 aa2.83□□□□□ -1.96
HMGB1P6-201ENST00000569046 THAP2Q9H0W7 228 aa2.83□□□□□ -1.96
HMGB1P6-201ENST00000569046 BLZF1Q9H2G9 400 aa2.83□□□□□ -1.96
HMGB1P6-201ENST00000569046 RNF121Q9H920 327 aa2.83□□□□□ -1.96
HMGB1P6-201ENST00000569046 ZDHHC18Q9NUE0 388 aa2.83□□□□□ -1.96
HMGB1P6-201ENST00000569046 ETNK2Q9NVF9 386 aa2.83□□□□□ -1.96
HMGB1P6-201ENST00000569046 PCSK1NQ9UHG2 260 aa2.83□□□□□ -1.96
HMGB1P6-201ENST00000569046 PILRAQ9UKJ1 303 aa2.83□□□□□ -1.96
HMGB1P6-201ENST00000569046 CFAP45Q9UL16 551 aa2.83□□□□□ -1.96
HMGB1P6-201ENST00000569046 MRPS33Q9Y291 106 aaKnown RBP2.83□□□□□ -1.96
HMGB1P6-201ENST00000569046 ETV7Q9Y603 341 aa2.83□□□□□ -1.96
HMGB1P6-201ENST00000569046 CRYBG3Q68DQ2 2970 aa2.82□□□□□ -1.96
HMGB1P6-201ENST00000569046 BSNQ9UPA5 3926 aa2.82□□□□□ -1.96
HMGB1P6-201ENST00000569046 CROCCQ5TZA2 2017 aa2.82□□□□□ -1.96
HMGB1P6-201ENST00000569046 SERTM2A0A1B0GWG4 89 aa2.82□□□□□ -1.96
HMGB1P6-201ENST00000569046 ATP6AP2A0A1C7CYW4 349 aa2.82□□□□□ -1.96
HMGB1P6-201ENST00000569046 HELTA6NFD8 242 aa2.82□□□□□ -1.96
HMGB1P6-201ENST00000569046 ZNF716A6NP11 495 aa2.82□□□□□ -1.96
HMGB1P6-201ENST00000569046 SRRM4A7MD48 611 aaKnown RBP2.82□□□□□ -1.96
HMGB1P6-201ENST00000569046 ZNF732B4DXR9 585 aa2.82□□□□□ -1.96
HMGB1P6-201ENST00000569046 SLCO1B7G3V0H7 640 aa2.82□□□□□ -1.96
HMGB1P6-201ENST00000569046 PRAMEF26H0Y7S4 382 aa2.82□□□□□ -1.96
HMGB1P6-201ENST00000569046 H0Y8G0 127 aa2.82□□□□□ -1.96
HMGB1P6-201ENST00000569046 K7ERQ8 282 aa2.82□□□□□ -1.96
HMGB1P6-201ENST00000569046 KPNA3O00505 521 aaPredicted RBP2.82□□□□□ -1.96
HMGB1P6-201ENST00000569046 FPGTO14772 594 aa2.82□□□□□ -1.96
HMGB1P6-201ENST00000569046 YKT6O15498 198 aa2.82□□□□□ -1.96
HMGB1P6-201ENST00000569046 ARHGEF9O43307 516 aa2.82□□□□□ -1.96
HMGB1P6-201ENST00000569046 LATO43561 262 aa2.82□□□□□ -1.96
HMGB1P6-201ENST00000569046 DUX1O43812 170 aa2.82□□□□□ -1.96
HMGB1P6-201ENST00000569046 KIF5CO60282 957 aa2.82□□□□□ -1.96
HMGB1P6-201ENST00000569046 DNAJB6O75190 326 aa2.82□□□□□ -1.96
HMGB1P6-201ENST00000569046 RHBDL1O75783 438 aa2.82□□□□□ -1.96
HMGB1P6-201ENST00000569046 GOT2P00505 430 aaKnown RBP2.82□□□□□ -1.96
HMGB1P6-201ENST00000569046 HLA-DRAP01903 254 aa2.82□□□□□ -1.96
HMGB1P6-201ENST00000569046 MT-ND1P03886 318 aa2.82□□□□□ -1.96
HMGB1P6-201ENST00000569046 RPLP0P05388 317 aaKnown RBP2.82□□□□□ -1.96
HMGB1P6-201ENST00000569046 CTSLP07711 333 aa2.82□□□□□ -1.96
HMGB1P6-201ENST00000569046 YES1P07947 543 aa2.82□□□□□ -1.96
HMGB1P6-201ENST00000569046 ZNF735P0CB33 412 aa2.82□□□□□ -1.96
HMGB1P6-201ENST00000569046 TRIM49P0CI25 452 aa2.82□□□□□ -1.96
HMGB1P6-201ENST00000569046 TRIM49CP0CI26 452 aa2.82□□□□□ -1.96
HMGB1P6-201ENST00000569046 CT45A8P0DMV1 189 aa2.82□□□□□ -1.96
HMGB1P6-201ENST00000569046 CT45A9P0DMV2 189 aa2.82□□□□□ -1.96
HMGB1P6-201ENST00000569046 IGHV4-31P0DP07 118 aa2.82□□□□□ -1.96
HMGB1P6-201ENST00000569046 CCL4P13236 92 aa2.82□□□□□ -1.96
HMGB1P6-201ENST00000569046 ANPEPP15144 967 aa2.82□□□□□ -1.96
HMGB1P6-201ENST00000569046 NCF2P19878 526 aaPredicted RBP2.82□□□□□ -1.96
HMGB1P6-201ENST00000569046 HNF1AP20823 631 aa2.82□□□□□ -1.96
HMGB1P6-201ENST00000569046 PCMT1P22061 227 aa2.82□□□□□ -1.96
HMGB1P6-201ENST00000569046 CDH3P22223 829 aa2.82□□□□□ -1.96
HMGB1P6-201ENST00000569046 DPP4P27487 766 aa2.82□□□□□ -1.96
HMGB1P6-201ENST00000569046 ADIGQ0VDE8 80 aa2.82□□□□□ -1.96
HMGB1P6-201ENST00000569046 SELPLGQ14242 412 aa2.82□□□□□ -1.96
HMGB1P6-201ENST00000569046 FZD2Q14332 565 aa2.82□□□□□ -1.96
HMGB1P6-201ENST00000569046 SQLEQ14534 574 aa2.82□□□□□ -1.96
HMGB1P6-201ENST00000569046 EXOSC7Q15024 291 aaKnown RBP2.82□□□□□ -1.96
HMGB1P6-201ENST00000569046 HERC3Q15034 1050 aa2.82□□□□□ -1.96
HMGB1P6-201ENST00000569046 TAF13Q15543 124 aa2.82□□□□□ -1.96
HMGB1P6-201ENST00000569046 HADHQ16836 314 aaKnown RBP2.82□□□□□ -1.96
HMGB1P6-201ENST00000569046 CT45A2Q5DJT8 189 aa2.82□□□□□ -1.96
HMGB1P6-201ENST00000569046 XKR6Q5GH73 641 aa2.82□□□□□ -1.96
HMGB1P6-201ENST00000569046 BSPRYQ5W0U4 402 aa2.82□□□□□ -1.96
HMGB1P6-201ENST00000569046 PYHIN1Q6K0P9 492 aa2.82□□□□□ -1.96
HMGB1P6-201ENST00000569046 NIPAL3Q6P499 406 aa2.82□□□□□ -1.96
HMGB1P6-201ENST00000569046 LRRC8BQ6P9F7 803 aa2.82□□□□□ -1.96
HMGB1P6-201ENST00000569046 DHRS11Q6UWP2 260 aa2.82□□□□□ -1.96
HMGB1P6-201ENST00000569046 CLEC18BQ6UXF7 455 aa2.82□□□□□ -1.96
HMGB1P6-201ENST00000569046 GCNT7Q6ZNI0 430 aa2.82□□□□□ -1.96
HMGB1P6-201ENST00000569046 C17orf107Q6ZR85 190 aa2.82□□□□□ -1.96
HMGB1P6-201ENST00000569046 NANOGNBQ7Z5D8 188 aa2.82□□□□□ -1.96
HMGB1P6-201ENST00000569046 LHFPL4Q7Z7J7 247 aa2.82□□□□□ -1.96
HMGB1P6-201ENST00000569046 FAM131BQ86XD5 332 aa2.82□□□□□ -1.96
HMGB1P6-201ENST00000569046 EID3Q8N140 333 aa2.82□□□□□ -1.96
HMGB1P6-201ENST00000569046 BHLHE23Q8NDY6 225 aa2.82□□□□□ -1.96
HMGB1P6-201ENST00000569046 ZNF564Q8TBZ8 553 aaPredicted RBP2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms