RNA–Protein interactions for RNA: ENST00000568848.5

USB1-214, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 548 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-214ENST00000568848 CELA3BP08861 270 aa12.93□□□□□ -0.34
USB1-214ENST00000568848 CSF3P09919 207 aa12.93□□□□□ -0.34
USB1-214ENST00000568848 ZNF23P17027 643 aa12.93□□□□□ -0.34
USB1-214ENST00000568848 KRT4P19013 534 aa12.93□□□□□ -0.34
USB1-214ENST00000568848 MATN1P21941 496 aa12.93□□□□□ -0.34
USB1-214ENST00000568848 CALCRP30988 508 aa12.93□□□□□ -0.34
USB1-214ENST00000568848 THBS2P35442 1172 aa12.93□□□□□ -0.34
USB1-214ENST00000568848 PGM1P36871 562 aa12.93□□□□□ -0.34
USB1-214ENST00000568848 CCT5P48643 541 aa12.93□□□□□ -0.34
USB1-214ENST00000568848 CSNK2A1P68400 391 aaPredicted RBP12.93□□□□□ -0.34
USB1-214ENST00000568848 ZNF141Q15928 474 aa12.93□□□□□ -0.34
USB1-214ENST00000568848 TNFAIP8L2Q6P589 184 aaPredicted RBP12.93□□□□□ -0.34
USB1-214ENST00000568848 EMBQ6PCB8 327 aa12.93□□□□□ -0.34
USB1-214ENST00000568848 LINGO2Q7L985 606 aa12.93□□□□□ -0.34
USB1-214ENST00000568848 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.93□□□□□ -0.34
USB1-214ENST00000568848 ST8SIA1Q92185 356 aa12.93□□□□□ -0.34
USB1-214ENST00000568848 CNOT9Q92600 299 aaKnown RBP12.93□□□□□ -0.34
USB1-214ENST00000568848 IQCGQ9H095 443 aaKnown RBP12.93□□□□□ -0.34
USB1-214ENST00000568848 OR51I1Q9H343 314 aa12.93□□□□□ -0.34
USB1-214ENST00000568848 FKRPQ9H9S5 495 aa12.93□□□□□ -0.34
USB1-214ENST00000568848 HHATLQ9HCP6 504 aa12.93□□□□□ -0.34
USB1-214ENST00000568848 SERINC1Q9NRX5 453 aa12.93□□□□□ -0.34
USB1-214ENST00000568848 UPB1Q9UBR1 384 aa12.93□□□□□ -0.34
USB1-214ENST00000568848 CHRNA9Q9UGM1 479 aa12.93□□□□□ -0.34
USB1-214ENST00000568848 FKBP7Q9Y680 259 aa12.93□□□□□ -0.34
USB1-214ENST00000568848 A0A096LPE4 126 aa12.92□□□□□ -0.34
USB1-214ENST00000568848 A0A1W2PPZ6 126 aa12.92□□□□□ -0.34
USB1-214ENST00000568848 PRAMEF27A3QJZ7 478 aa12.92□□□□□ -0.34
USB1-214ENST00000568848 SPRY1O43609 319 aaPredicted RBP12.92□□□□□ -0.34
USB1-214ENST00000568848 TCF21O43680 179 aa12.92□□□□□ -0.34
USB1-214ENST00000568848 IGFBP1P08833 259 aaPredicted RBP12.92□□□□□ -0.34
USB1-214ENST00000568848 OR4A8P0C604 315 aa12.92□□□□□ -0.34
USB1-214ENST00000568848 OR12D1P0DN82 309 aa12.92□□□□□ -0.34
USB1-214ENST00000568848 HNF1AP20823 631 aa12.92□□□□□ -0.34
USB1-214ENST00000568848 SRP14P37108 136 aaKnown RBP12.92□□□□□ -0.34
USB1-214ENST00000568848 SNRPD2P62316 118 aaKnown RBP12.92□□□□□ -0.34
USB1-214ENST00000568848 PDK3Q15120 406 aa12.92□□□□□ -0.34
USB1-214ENST00000568848 ADIPOQQ15848 244 aa12.92□□□□□ -0.34
USB1-214ENST00000568848 PGS1Q32NB8 556 aa12.92□□□□□ -0.34
USB1-214ENST00000568848 FAM174BQ3ZCQ3 159 aa12.92□□□□□ -0.34
USB1-214ENST00000568848 CCDC153Q494R4 210 aa12.92□□□□□ -0.34
USB1-214ENST00000568848 IL23RQ5VWK5 629 aa12.92□□□□□ -0.34
USB1-214ENST00000568848 LIPNQ5VXI9 398 aa12.92□□□□□ -0.34
USB1-214ENST00000568848 OR4F3Q6IEY1 312 aa12.92□□□□□ -0.34
USB1-214ENST00000568848 TYW3Q6IPR3 259 aaKnown RBP12.92□□□□□ -0.34
USB1-214ENST00000568848 C12orf54Q6X4T0 127 aa12.92□□□□□ -0.34
USB1-214ENST00000568848 C6orf120Q7Z4R8 191 aa12.92□□□□□ -0.34
USB1-214ENST00000568848 R3HCC1LQ7Z5L2 792 aaKnown RBP12.92□□□□□ -0.34
USB1-214ENST00000568848 ANKRD46Q86W74 232 aa12.92□□□□□ -0.34
USB1-214ENST00000568848 CARM1Q86X55 608 aa12.92□□□□□ -0.34
USB1-214ENST00000568848 MEX3DQ86XN8 651 aaKnown RBP12.92□□□□□ -0.34
USB1-214ENST00000568848 ZIC4Q8N9L1 334 aa12.92□□□□□ -0.34
USB1-214ENST00000568848 PSMA8Q8TAA3 256 aa12.92□□□□□ -0.34
USB1-214ENST00000568848 CCDC126Q96EE4 140 aa12.92□□□□□ -0.34
USB1-214ENST00000568848 SLC35G5Q96KT7 338 aa12.92□□□□□ -0.34
USB1-214ENST00000568848 ADAM19Q9H013 955 aa12.92□□□□□ -0.34
USB1-214ENST00000568848 NARFLQ9H6Q4 476 aa12.92□□□□□ -0.34
USB1-214ENST00000568848 PPCSQ9HAB8 311 aa12.92□□□□□ -0.34
USB1-214ENST00000568848 LPAR2Q9HBW0 351 aa12.92□□□□□ -0.34
USB1-214ENST00000568848 RNF103-CHMP3A0A140T963 221 aa12.91□□□□□ -0.34
USB1-214ENST00000568848 SH3PXD2BA1X283 911 aa12.91□□□□□ -0.34
USB1-214ENST00000568848 LILRA1O75019 489 aa12.91□□□□□ -0.34
USB1-214ENST00000568848 STAMBPO95630 424 aa12.91□□□□□ -0.34
USB1-214ENST00000568848 PMS2P2O95744 297 aa12.91□□□□□ -0.34
USB1-214ENST00000568848 NEFHP12036 1026 aa12.91□□□□□ -0.34
USB1-214ENST00000568848 PGCP20142 388 aa12.91□□□□□ -0.34
USB1-214ENST00000568848 APEX1P27695 318 aaKnown RBP12.91□□□□□ -0.34
USB1-214ENST00000568848 SERPINF1P36955 418 aa12.91□□□□□ -0.34
USB1-214ENST00000568848 IDH2P48735 452 aaKnown RBP12.91□□□□□ -0.34
USB1-214ENST00000568848 SLC16A1P53985 500 aa12.91□□□□□ -0.34
USB1-214ENST00000568848 THSD4Q6ZMP0 1018 aa12.91□□□□□ -0.34
USB1-214ENST00000568848 CNPY4Q8N129 248 aa12.91□□□□□ -0.34
USB1-214ENST00000568848 SVOPLQ8N434 492 aa12.91□□□□□ -0.34
USB1-214ENST00000568848 TMEM99Q8N816 258 aa12.91□□□□□ -0.34
USB1-214ENST00000568848 FAM71CQ8NEG0 241 aa12.91□□□□□ -0.34
USB1-214ENST00000568848 PIGXQ8TBF5 258 aa12.91□□□□□ -0.34
USB1-214ENST00000568848 SFXN5Q8TD22 340 aa12.91□□□□□ -0.34
USB1-214ENST00000568848 MTERF3Q96E29 417 aa12.91□□□□□ -0.34
USB1-214ENST00000568848 METTL2AQ96IZ6 378 aaKnown RBP12.91□□□□□ -0.34
USB1-214ENST00000568848 PPP1R36Q96LQ0 422 aa12.91□□□□□ -0.34
USB1-214ENST00000568848 ALKBH3Q96Q83 286 aaPredicted RBP12.91□□□□□ -0.34
USB1-214ENST00000568848 NMUR2Q9GZQ4 415 aa12.91□□□□□ -0.34
USB1-214ENST00000568848 ZNF350Q9GZX5 532 aa12.91□□□□□ -0.34
USB1-214ENST00000568848 OCEL1Q9H607 264 aa12.91□□□□□ -0.34
USB1-214ENST00000568848 CA10Q9NS85 328 aa12.91□□□□□ -0.34
USB1-214ENST00000568848 AMDHD2Q9Y303 409 aa12.91□□□□□ -0.34
USB1-214ENST00000568848 TMED7-TICAM2A0A0A6YYA0 188 aa12.9□□□□□ -0.34
USB1-214ENST00000568848 LOC390937A0A1W2PQ73 354 aa12.9□□□□□ -0.34
USB1-214ENST00000568848 ZNF503-AS2A6NEH8 195 aa12.9□□□□□ -0.34
USB1-214ENST00000568848 AKR7A3O95154 331 aa12.9□□□□□ -0.34
USB1-214ENST00000568848 CECR9P0C854 216 aa12.9□□□□□ -0.34
USB1-214ENST00000568848 G6PDP11413 515 aa12.9□□□□□ -0.34
USB1-214ENST00000568848 ALDH3A1P30838 453 aa12.9□□□□□ -0.34
USB1-214ENST00000568848 MAGEA8P43361 318 aa12.9□□□□□ -0.34
USB1-214ENST00000568848 H3F3AP84243 136 aa12.9□□□□□ -0.34
USB1-214ENST00000568848 BNIP2Q12982 314 aa12.9□□□□□ -0.34
USB1-214ENST00000568848 SQLEQ14534 574 aa12.9□□□□□ -0.34
USB1-214ENST00000568848 ZSWIM7Q19AV6 140 aa12.9□□□□□ -0.34
USB1-214ENST00000568848 TBRG1Q3YBR2 411 aa12.9□□□□□ -0.34
USB1-214ENST00000568848 XKR7Q5GH72 579 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms