RNA–Protein interactions for RNA: ENST00000568676.5

HERPUD1-215, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, human

TSL 2

Gene HERPUD1, Length 571 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HERPUD1-215	ENST00000568676	ABHD12B	Q7Z5M8	362 aa	Predicted RBP	13.78	□□□□□ -0.2
HERPUD1-215	ENST00000568676	RIMKLA	Q8IXN7	391 aa		13.78	□□□□□ -0.2
HERPUD1-215	ENST00000568676	RFLNB	Q8N5W9	214 aa		13.78	□□□□□ -0.2
HERPUD1-215	ENST00000568676	FNDC5	Q8NAU1	212 aa		13.78	□□□□□ -0.2
HERPUD1-215	ENST00000568676	OR5AK3P	Q8NH89	298 aa		13.78	□□□□□ -0.2
HERPUD1-215	ENST00000568676	DDIT4L	Q96D03	193 aa		13.78	□□□□□ -0.2
HERPUD1-215	ENST00000568676	ARL5B	Q96KC2	179 aa		13.78	□□□□□ -0.2
HERPUD1-215	ENST00000568676	PRR14	Q9BWN1	585 aa		13.78	□□□□□ -0.2
HERPUD1-215	ENST00000568676	PIF1	Q9H611	641 aa		13.78	□□□□□ -0.2
HERPUD1-215	ENST00000568676	PRDM4	Q9UKN5	801 aa		13.78	□□□□□ -0.2
HERPUD1-215	ENST00000568676	WDR45	Q9Y484	360 aa		13.78	□□□□□ -0.2
HERPUD1-215	ENST00000568676	FLVCR1	Q9Y5Y0	555 aa		13.78	□□□□□ -0.2
HERPUD1-215	ENST00000568676	ANK2	Q01484	3957 aa		13.78	□□□□□ -0.2
HERPUD1-215	ENST00000568676	ZNF208	O43345	1280 aa		13.77	□□□□□ -0.21
HERPUD1-215	ENST00000568676	ZNF23	P17027	643 aa		13.77	□□□□□ -0.21
HERPUD1-215	ENST00000568676	NTF4	P34130	210 aa		13.77	□□□□□ -0.21
HERPUD1-215	ENST00000568676	OR2B6	P58173	313 aa		13.77	□□□□□ -0.21
HERPUD1-215	ENST00000568676	MST1L	Q2TV78	715 aa		13.77	□□□□□ -0.21
HERPUD1-215	ENST00000568676	IL23R	Q5VWK5	629 aa		13.77	□□□□□ -0.21
HERPUD1-215	ENST00000568676	ADGRG3	Q86Y34	549 aa		13.77	□□□□□ -0.21
HERPUD1-215	ENST00000568676	POMGNT2	Q8NAT1	580 aa		13.77	□□□□□ -0.21
HERPUD1-215	ENST00000568676	OR52E4	Q8NGH9	312 aa		13.77	□□□□□ -0.21
HERPUD1-215	ENST00000568676	TMEM45B	Q96B21	275 aa		13.77	□□□□□ -0.21
HERPUD1-215	ENST00000568676	FBXO17	Q96EF6	278 aa		13.77	□□□□□ -0.21
HERPUD1-215	ENST00000568676	SLC35G5	Q96KT7	338 aa		13.77	□□□□□ -0.21
HERPUD1-215	ENST00000568676	ZNF317	Q96PQ6	595 aa	Predicted RBP	13.77	□□□□□ -0.21
HERPUD1-215	ENST00000568676	KCNS3	Q9BQ31	491 aa		13.77	□□□□□ -0.21
HERPUD1-215	ENST00000568676	C1QTNF6	Q9BXI9	259 aa		13.77	□□□□□ -0.21
HERPUD1-215	ENST00000568676	SAP130	Q9H0E3	1048 aa		13.77	□□□□□ -0.21
HERPUD1-215	ENST00000568676	SLC7A10	Q9NS82	523 aa		13.77	□□□□□ -0.21
HERPUD1-215	ENST00000568676	SLC35F4	A4IF30	521 aa		13.76	□□□□□ -0.21
HERPUD1-215	ENST00000568676	TMEM233	B4DJY2	109 aa		13.76	□□□□□ -0.21
HERPUD1-215	ENST00000568676		B9A039	149 aa		13.76	□□□□□ -0.21
HERPUD1-215	ENST00000568676	ATP6V1G2-DDX39B	F2Z307	99 aa		13.76	□□□□□ -0.21
HERPUD1-215	ENST00000568676	RNASET2	O00584	256 aa	Known RBP	13.76	□□□□□ -0.21
HERPUD1-215	ENST00000568676	TGFA	P01135	160 aa		13.76	□□□□□ -0.21
HERPUD1-215	ENST00000568676	CHRNG	P07510	517 aa		13.76	□□□□□ -0.21
HERPUD1-215	ENST00000568676	SERPINF1	P36955	418 aa		13.76	□□□□□ -0.21
HERPUD1-215	ENST00000568676	FOXG1	P55316	489 aa	Predicted RBP	13.76	□□□□□ -0.21
HERPUD1-215	ENST00000568676	RPS26	P62854	115 aa	Known RBP	13.76	□□□□□ -0.21
HERPUD1-215	ENST00000568676	SLC17A1	Q14916	467 aa		13.76	□□□□□ -0.21
HERPUD1-215	ENST00000568676	SMU1	Q2TAY7	513 aa		13.76	□□□□□ -0.21
HERPUD1-215	ENST00000568676	IQCC	Q4KMZ1	466 aa		13.76	□□□□□ -0.21
HERPUD1-215	ENST00000568676	EMB	Q6PCB8	327 aa		13.76	□□□□□ -0.21
HERPUD1-215	ENST00000568676	PAQR6	Q6TCH4	344 aa		13.76	□□□□□ -0.21
HERPUD1-215	ENST00000568676	UGT2A3	Q6UWM9	527 aa		13.76	□□□□□ -0.21
HERPUD1-215	ENST00000568676	CCDC103	Q8IW40	242 aa		13.76	□□□□□ -0.21
HERPUD1-215	ENST00000568676	CMIP	Q8IY22	773 aa		13.76	□□□□□ -0.21
HERPUD1-215	ENST00000568676	ARFGAP2	Q8N6H7	521 aa		13.76	□□□□□ -0.21
HERPUD1-215	ENST00000568676	KRTCAP2	Q8N6L1	136 aa		13.76	□□□□□ -0.21
HERPUD1-215	ENST00000568676	SORCS2	Q96PQ0	1159 aa		13.76	□□□□□ -0.21
HERPUD1-215	ENST00000568676	C1orf50	Q9BV19	199 aa		13.76	□□□□□ -0.21
HERPUD1-215	ENST00000568676	KATNB1	Q9BVA0	655 aa		13.76	□□□□□ -0.21
HERPUD1-215	ENST00000568676	SF3B5	Q9BWJ5	86 aa	Known RBP	13.76	□□□□□ -0.21
HERPUD1-215	ENST00000568676	SERHL2	Q9H4I8	314 aa		13.76	□□□□□ -0.21
HERPUD1-215	ENST00000568676	ST6GALNAC1	Q9NSC7	600 aa	Predicted RBP	13.76	□□□□□ -0.21
HERPUD1-215	ENST00000568676	MKS1	Q9NXB0	559 aa		13.76	□□□□□ -0.21
HERPUD1-215	ENST00000568676	MOK	Q9UQ07	419 aa		13.76	□□□□□ -0.21
HERPUD1-215	ENST00000568676	PRPF8	Q6P2Q9	2335 aa	Known RBP eCLIP	13.76	□□□□□ -0.21	5e-7	■■■□□ 19
HERPUD1-215	ENST00000568676	CENPVL1	A0A0U1RR11	272 aa		13.75	□□□□□ -0.21
HERPUD1-215	ENST00000568676	RNF103-CHMP3	A0A140T963	221 aa		13.75	□□□□□ -0.21
HERPUD1-215	ENST00000568676	TCF21	O43680	179 aa		13.75	□□□□□ -0.21
HERPUD1-215	ENST00000568676	LY6H	O94772	140 aa		13.75	□□□□□ -0.21
HERPUD1-215	ENST00000568676	CRYAA	P02489	173 aa		13.75	□□□□□ -0.21
HERPUD1-215	ENST00000568676	ERCC1	P07992	297 aa	Predicted RBP	13.75	□□□□□ -0.21
HERPUD1-215	ENST00000568676	FAM153B	P0C7A2	387 aa		13.75	□□□□□ -0.21
HERPUD1-215	ENST00000568676	UQCRB	P14927	111 aa		13.75	□□□□□ -0.21
HERPUD1-215	ENST00000568676	RYK	P34925	604 aa		13.75	□□□□□ -0.21
HERPUD1-215	ENST00000568676	POLR2H	P52434	150 aa	Known RBP	13.75	□□□□□ -0.21
HERPUD1-215	ENST00000568676	CLDN8	P56748	225 aa		13.75	□□□□□ -0.21
HERPUD1-215	ENST00000568676	KCNJ10	P78508	379 aa		13.75	□□□□□ -0.21
HERPUD1-215	ENST00000568676	EFNB3	Q15768	340 aa		13.75	□□□□□ -0.21
HERPUD1-215	ENST00000568676	MAPK14	Q16539	360 aa		13.75	□□□□□ -0.21
HERPUD1-215	ENST00000568676	C3orf36	Q3SXR2	165 aa		13.75	□□□□□ -0.21
HERPUD1-215	ENST00000568676	TSPO2	Q5TGU0	170 aa		13.75	□□□□□ -0.21
HERPUD1-215	ENST00000568676	TYW3	Q6IPR3	259 aa	Known RBP	13.75	□□□□□ -0.21
HERPUD1-215	ENST00000568676	SLC46A3	Q7Z3Q1	461 aa		13.75	□□□□□ -0.21
HERPUD1-215	ENST00000568676	EIF1AD	Q8N9N8	165 aa	Known RBP	13.75	□□□□□ -0.21
HERPUD1-215	ENST00000568676	HPS1	Q92902	700 aa		13.75	□□□□□ -0.21
HERPUD1-215	ENST00000568676	ZIM3	Q96PE6	472 aa		13.75	□□□□□ -0.21
HERPUD1-215	ENST00000568676	OR51I1	Q9H343	314 aa		13.75	□□□□□ -0.21
HERPUD1-215	ENST00000568676	C12orf65	Q9H3J6	166 aa	Known RBP	13.75	□□□□□ -0.21
HERPUD1-215	ENST00000568676	CA10	Q9NS85	328 aa		13.75	□□□□□ -0.21
HERPUD1-215	ENST00000568676	ASIC5	Q9NY37	505 aa		13.75	□□□□□ -0.21
HERPUD1-215	ENST00000568676	SVEP1	Q4LDE5	3571 aa		13.75	□□□□□ -0.21
HERPUD1-215	ENST00000568676	IGHV4-61	A0A0C4DH41	118 aa		13.74	□□□□□ -0.21
HERPUD1-215	ENST00000568676	OR6C65	A6NJZ3	312 aa		13.74	□□□□□ -0.21
HERPUD1-215	ENST00000568676	VSTM5	A8MXK1	200 aa		13.74	□□□□□ -0.21
HERPUD1-215	ENST00000568676	FAAH	O00519	579 aa		13.74	□□□□□ -0.21
HERPUD1-215	ENST00000568676	SLU7	O95391	586 aa	Known RBP	13.74	□□□□□ -0.21
HERPUD1-215	ENST00000568676	PCMT1	P22061	227 aa		13.74	□□□□□ -0.21
HERPUD1-215	ENST00000568676	PPOX	P50336	477 aa		13.74	□□□□□ -0.21
HERPUD1-215	ENST00000568676	HPCA	P84074	193 aa		13.74	□□□□□ -0.21
HERPUD1-215	ENST00000568676	SLC25A3	Q00325	362 aa		13.74	□□□□□ -0.21
HERPUD1-215	ENST00000568676	CR1L	Q2VPA4	569 aa		13.74	□□□□□ -0.21
HERPUD1-215	ENST00000568676	PGS1	Q32NB8	556 aa		13.74	□□□□□ -0.21
HERPUD1-215	ENST00000568676	C9orf135	Q5VTT2	229 aa		13.74	□□□□□ -0.21
HERPUD1-215	ENST00000568676	IL17REL	Q6ZVW7	336 aa		13.74	□□□□□ -0.21
HERPUD1-215	ENST00000568676	C4orf33	Q8N1A6	199 aa		13.74	□□□□□ -0.21
HERPUD1-215	ENST00000568676	VPS37A	Q8NEZ2	397 aa		13.74	□□□□□ -0.21

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