RNA–Protein interactions for RNA: ENST00000566703.1

RNF40-209, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-209ENST00000566703 VPS13CQ709C8 3753 aa13.2□□□□□ -0.3
RNF40-209ENST00000566703 TMED7-TICAM2A0A0A6YYA0 188 aa13.19□□□□□ -0.3
RNF40-209ENST00000566703 PRAMEF27A3QJZ7 478 aa13.19□□□□□ -0.3
RNF40-209ENST00000566703 AGAP5A6NIR3 686 aa13.19□□□□□ -0.3
RNF40-209ENST00000566703 E7EQL1 145 aa13.19□□□□□ -0.3
RNF40-209ENST00000566703 RGS16O15492 202 aaPredicted RBP13.19□□□□□ -0.3
RNF40-209ENST00000566703 ADAM11O75078 769 aa13.19□□□□□ -0.3
RNF40-209ENST00000566703 NDUFS7O75251 213 aa13.19□□□□□ -0.3
RNF40-209ENST00000566703 RAD51DO75771 328 aa13.19□□□□□ -0.3
RNF40-209ENST00000566703 IGHV3-9P01782 118 aa13.19□□□□□ -0.3
RNF40-209ENST00000566703 CD40P25942 277 aa13.19□□□□□ -0.3
RNF40-209ENST00000566703 POLR2HP52434 150 aaKnown RBP13.19□□□□□ -0.3
RNF40-209ENST00000566703 STX3Q13277 289 aa13.19□□□□□ -0.3
RNF40-209ENST00000566703 GSTA3Q16772 222 aa13.19□□□□□ -0.3
RNF40-209ENST00000566703 KRT71Q3SY84 523 aa13.19□□□□□ -0.3
RNF40-209ENST00000566703 FAM174BQ3ZCQ3 159 aa13.19□□□□□ -0.3
RNF40-209ENST00000566703 CXXC5Q7LFL8 322 aaKnown RBP13.19□□□□□ -0.3
RNF40-209ENST00000566703 HIPK1Q86Z02 1210 aa13.19□□□□□ -0.3
RNF40-209ENST00000566703 CCDC103Q8IW40 242 aa13.19□□□□□ -0.3
RNF40-209ENST00000566703 PIAS4Q8N2W9 510 aaPredicted RBP13.19□□□□□ -0.3
RNF40-209ENST00000566703 C17orf78Q8N4C9 275 aa13.19□□□□□ -0.3
RNF40-209ENST00000566703 C1orf162Q8NEQ5 155 aaPredicted RBP13.19□□□□□ -0.3
RNF40-209ENST00000566703 OR10H5Q8NGA6 315 aa13.19□□□□□ -0.3
RNF40-209ENST00000566703 OR52N5Q8NH56 324 aa13.19□□□□□ -0.3
RNF40-209ENST00000566703 CNOT9Q92600 299 aaKnown RBP13.19□□□□□ -0.3
RNF40-209ENST00000566703 DDIT4LQ96D03 193 aa13.19□□□□□ -0.3
RNF40-209ENST00000566703 AMBRA1Q9C0C7 1298 aa13.19□□□□□ -0.3
RNF40-209ENST00000566703 OR11A1Q9GZK7 315 aa13.19□□□□□ -0.3
RNF40-209ENST00000566703 SLC38A1Q9H2H9 487 aa13.19□□□□□ -0.3
RNF40-209ENST00000566703 PIF1Q9H611 641 aa13.19□□□□□ -0.3
RNF40-209ENST00000566703 DCTN4Q9UJW0 460 aa13.19□□□□□ -0.3
RNF40-209ENST00000566703 OSGIN1Q9UJX0 560 aa13.19□□□□□ -0.3
RNF40-209ENST00000566703 GDF2Q9UK05 429 aaPredicted RBP13.19□□□□□ -0.3
RNF40-209ENST00000566703 TMED7Q9Y3B3 224 aa13.19□□□□□ -0.3
RNF40-209ENST00000566703 CCDC154A6NI56 674 aa13.18□□□□□ -0.3
RNF40-209ENST00000566703 PDLIM1O00151 329 aa13.18□□□□□ -0.3
RNF40-209ENST00000566703 IFNA2P01563 188 aa13.18□□□□□ -0.3
RNF40-209ENST00000566703 UQCRBP14927 111 aa13.18□□□□□ -0.3
RNF40-209ENST00000566703 SLC1A3P43003 542 aa13.18□□□□□ -0.3
RNF40-209ENST00000566703 ZNF83P51522 516 aa13.18□□□□□ -0.3
RNF40-209ENST00000566703 TGFBR3Q03167 851 aa13.18□□□□□ -0.3
RNF40-209ENST00000566703 PLAURQ03405 335 aa13.18□□□□□ -0.3
RNF40-209ENST00000566703 SLC17A1Q14916 467 aa13.18□□□□□ -0.3
RNF40-209ENST00000566703 C11orf71Q6IPW1 123 aa13.18□□□□□ -0.3
RNF40-209ENST00000566703 ZNF544Q6NX49 715 aa13.18□□□□□ -0.3
RNF40-209ENST00000566703 SLC22A25Q6T423 547 aa13.18□□□□□ -0.3
RNF40-209ENST00000566703 SPATA19Q7Z5L4 167 aa13.18□□□□□ -0.3
RNF40-209ENST00000566703 ZNF440Q8IYI8 595 aa13.18□□□□□ -0.3
RNF40-209ENST00000566703 FBXL14Q8N1E6 418 aa13.18□□□□□ -0.3
RNF40-209ENST00000566703 PANX1Q96RD7 426 aa13.18□□□□□ -0.3
RNF40-209ENST00000566703 NUF2Q9BZD4 464 aa13.18□□□□□ -0.3
RNF40-209ENST00000566703 ADAM19Q9H013 955 aa13.18□□□□□ -0.3
RNF40-209ENST00000566703 UPB1Q9UBR1 384 aa13.18□□□□□ -0.3
RNF40-209ENST00000566703 POU2F3Q9UKI9 436 aa13.18□□□□□ -0.3
RNF40-209ENST00000566703 SLC9A8Q9Y2E8 581 aa13.18□□□□□ -0.3
RNF40-209ENST00000566703 FLVCR1Q9Y5Y0 555 aa13.18□□□□□ -0.3
RNF40-209ENST00000566703 CLDN24A6NM45 220 aa13.17□□□□□ -0.3
RNF40-209ENST00000566703 SSX4O60224 188 aa13.17□□□□□ -0.3
RNF40-209ENST00000566703 DBIP07108 87 aaKnown RBP13.17□□□□□ -0.3
RNF40-209ENST00000566703 ITGA5P08648 1049 aa13.17□□□□□ -0.3
RNF40-209ENST00000566703 IMPDH2P12268 514 aa13.17□□□□□ -0.3
RNF40-209ENST00000566703 BMP4P12644 408 aa13.17□□□□□ -0.3
RNF40-209ENST00000566703 IL7RP16871 459 aa13.17□□□□□ -0.3
RNF40-209ENST00000566703 CCNA2P20248 432 aa13.17□□□□□ -0.3
RNF40-209ENST00000566703 RPS4Y1P22090 263 aaKnown RBP13.17□□□□□ -0.3
RNF40-209ENST00000566703 PAX7P23759 505 aa13.17□□□□□ -0.3
RNF40-209ENST00000566703 TACR3P29371 465 aa13.17□□□□□ -0.3
RNF40-209ENST00000566703 FABP6P51161 128 aa13.17□□□□□ -0.3
RNF40-209ENST00000566703 NUDT6P53370 316 aa13.17□□□□□ -0.3
RNF40-209ENST00000566703 UFM1P61960 85 aa13.17□□□□□ -0.3
RNF40-209ENST00000566703 IRX1P78414 480 aaPredicted RBP13.17□□□□□ -0.3
RNF40-209ENST00000566703 RAB35Q15286 201 aa13.17□□□□□ -0.3
RNF40-209ENST00000566703 SYPL1Q16563 259 aa13.17□□□□□ -0.3
RNF40-209ENST00000566703 ZSWIM7Q19AV6 140 aa13.17□□□□□ -0.3
RNF40-209ENST00000566703 TNFAIP8L3Q5GJ75 292 aa13.17□□□□□ -0.3
RNF40-209ENST00000566703 PODNL1Q6PEZ8 512 aa13.17□□□□□ -0.3
RNF40-209ENST00000566703 PAQR6Q6TCH4 344 aa13.17□□□□□ -0.3
RNF40-209ENST00000566703 RNF130Q86XS8 419 aa13.17□□□□□ -0.3
RNF40-209ENST00000566703 MUC15Q8N387 334 aa13.17□□□□□ -0.3
RNF40-209ENST00000566703 ANKFN1Q8N957 763 aa13.17□□□□□ -0.3
RNF40-209ENST00000566703 WDR31Q8NA23 367 aa13.17□□□□□ -0.3
RNF40-209ENST00000566703 BOD1Q96IK1 185 aa13.17□□□□□ -0.3
RNF40-209ENST00000566703 INPP5KQ9BT40 448 aa13.17□□□□□ -0.3
RNF40-209ENST00000566703 SF3B5Q9BWJ5 86 aaKnown RBP13.17□□□□□ -0.3
RNF40-209ENST00000566703 CACNG6Q9BXT2 260 aa13.17□□□□□ -0.3
RNF40-209ENST00000566703 FKRPQ9H9S5 495 aa13.17□□□□□ -0.3
RNF40-209ENST00000566703 SLC17A5Q9NRA2 495 aa13.17□□□□□ -0.3
RNF40-209ENST00000566703 YAE1D1Q9NRH1 226 aa13.17□□□□□ -0.3
RNF40-209ENST00000566703 AIG1Q9NVV5 245 aa13.17□□□□□ -0.3
RNF40-209ENST00000566703 AMDHD2Q9Y303 409 aa13.17□□□□□ -0.3
RNF40-209ENST00000566703 CADP27708 2225 aa13.17□□□□□ -0.3
RNF40-209ENST00000566703 TMEM72A0PK05 275 aa13.16□□□□□ -0.3
RNF40-209ENST00000566703 CFAP73A6NFT4 308 aa13.16□□□□□ -0.3
RNF40-209ENST00000566703 ELOA3DA6NLF2 546 aaPredicted RBP13.16□□□□□ -0.3
RNF40-209ENST00000566703 H7C417 338 aa13.16□□□□□ -0.3
RNF40-209ENST00000566703 AP3D1O14617 1153 aa13.16□□□□□ -0.3
RNF40-209ENST00000566703 KRT75O95678 551 aa13.16□□□□□ -0.3
RNF40-209ENST00000566703 PGRP06401 933 aa13.16□□□□□ -0.3
RNF40-209ENST00000566703 CHRM4P08173 479 aa13.16□□□□□ -0.3
RNF40-209ENST00000566703 NR2F1P10589 423 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms