RNA–Protein interactions for RNA: ENST00000566136.1

UBFD1-205, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 2,485 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-205ENST00000566136 GTF2H2Q13888 395 aa9.71□□□□□ -0.86
UBFD1-205ENST00000566136 PHKG1Q16816 387 aa9.71□□□□□ -0.86
UBFD1-205ENST00000566136 PNLIPRP3Q17RR3 467 aa9.71□□□□□ -0.86
UBFD1-205ENST00000566136 CNPY1Q3B7I2 92 aa9.71□□□□□ -0.86
UBFD1-205ENST00000566136 PLAC9Q5JTB6 97 aa9.71□□□□□ -0.86
UBFD1-205ENST00000566136 CAPN13Q6MZZ7 669 aaPredicted RBP9.71□□□□□ -0.86
UBFD1-205ENST00000566136 GTF2H2CQ6P1K8 395 aa9.71□□□□□ -0.86
UBFD1-205ENST00000566136 FAM198BQ6UWH4 519 aa9.71□□□□□ -0.86
UBFD1-205ENST00000566136 PLXDC2Q6UX71 529 aa9.71□□□□□ -0.86
UBFD1-205ENST00000566136 MBOAT1Q6ZNC8 495 aa9.71□□□□□ -0.86
UBFD1-205ENST00000566136 PROKR2Q8NFJ6 384 aa9.71□□□□□ -0.86
UBFD1-205ENST00000566136 VANGL1Q8TAA9 524 aaPredicted RBP9.71□□□□□ -0.86
UBFD1-205ENST00000566136 TMEM125Q96AQ2 219 aa9.71□□□□□ -0.86
UBFD1-205ENST00000566136 LSM7Q9UK45 103 aaKnown RBP9.71□□□□□ -0.86
UBFD1-205ENST00000566136 V9GYQ6 96 aa9.71□□□□□ -0.86
UBFD1-205ENST00000566136 ZFC3H1O60293 1989 aaKnown RBP9.7□□□□□ -0.86
UBFD1-205ENST00000566136 PIEZO1Q92508 2521 aa9.7□□□□□ -0.86
UBFD1-205ENST00000566136 PRR19A6NJB7 356 aa9.7□□□□□ -0.86
UBFD1-205ENST00000566136 ARPC2O15144 300 aa9.7□□□□□ -0.86
UBFD1-205ENST00000566136 CD3GP09693 182 aa9.7□□□□□ -0.86
UBFD1-205ENST00000566136 ZNF7P17097 686 aaPredicted RBP9.7□□□□□ -0.86
UBFD1-205ENST00000566136 GSK3BP49841 420 aa9.7□□□□□ -0.86
UBFD1-205ENST00000566136 ERVK-8P63133 956 aa9.7□□□□□ -0.86
UBFD1-205ENST00000566136 ATP6AP1LQ52LC2 224 aa9.7□□□□□ -0.86
UBFD1-205ENST00000566136 PRMT9Q6P2P2 845 aa9.7□□□□□ -0.86
UBFD1-205ENST00000566136 RFLNAQ6ZTI6 216 aa9.7□□□□□ -0.86
UBFD1-205ENST00000566136 DPPA4Q7L190 304 aa9.7□□□□□ -0.86
UBFD1-205ENST00000566136 GJC3Q8NFK1 279 aa9.7□□□□□ -0.86
UBFD1-205ENST00000566136 TRMT10AQ8TBZ6 339 aaKnown RBP9.7□□□□□ -0.86
UBFD1-205ENST00000566136 GPA33Q99795 319 aa9.7□□□□□ -0.86
UBFD1-205ENST00000566136 CCM2Q9BSQ5 444 aa9.7□□□□□ -0.86
UBFD1-205ENST00000566136 POLE4Q9NR33 117 aa9.7□□□□□ -0.86
UBFD1-205ENST00000566136 TMED7Q9Y3B3 224 aa9.7□□□□□ -0.86
UBFD1-205ENST00000566136 POLR3HQ9Y535 204 aaPredicted RBP9.7□□□□□ -0.86
UBFD1-205ENST00000566136 GLYATL1P3A0A0U1RQE8 302 aa9.7□□□□□ -0.86
UBFD1-205ENST00000566136 DHRS12A0PJE2 317 aa9.7□□□□□ -0.86
UBFD1-205ENST00000566136 PDLIM1O00151 329 aa9.7□□□□□ -0.86
UBFD1-205ENST00000566136 CCL24O00175 119 aa9.7□□□□□ -0.86
UBFD1-205ENST00000566136 SOCS2O14508 198 aa9.7□□□□□ -0.86
UBFD1-205ENST00000566136 TOR1AO14656 332 aa9.7□□□□□ -0.86
UBFD1-205ENST00000566136 TAPBPO15533 448 aa9.7□□□□□ -0.86
UBFD1-205ENST00000566136 ZBTB11O95625 1053 aaPredicted RBP9.7□□□□□ -0.86
UBFD1-205ENST00000566136 LATS1O95835 1130 aa9.7□□□□□ -0.86
UBFD1-205ENST00000566136 POLR2CP19387 275 aaPredicted RBP9.7□□□□□ -0.86
UBFD1-205ENST00000566136 CFL1P23528 166 aaKnown RBP9.7□□□□□ -0.86
UBFD1-205ENST00000566136 LAP3P28838 519 aa9.7□□□□□ -0.86
UBFD1-205ENST00000566136 CLRN1P58418 232 aa9.7□□□□□ -0.86
UBFD1-205ENST00000566136 NAE1Q13564 534 aa9.7□□□□□ -0.86
UBFD1-205ENST00000566136 ABRAXAS2Q15018 415 aa9.7□□□□□ -0.86
UBFD1-205ENST00000566136 CPSF6Q16630 551 aaKnown RBP eCLIP9.7□□□□□ -0.86
UBFD1-205ENST00000566136 CDKN3Q16667 212 aa9.7□□□□□ -0.86
UBFD1-205ENST00000566136 NSUN5P2Q63ZY6 315 aa9.7□□□□□ -0.86
UBFD1-205ENST00000566136 DPY19L4Q7Z388 723 aa9.7□□□□□ -0.86
UBFD1-205ENST00000566136 SNX20Q7Z614 316 aa9.7□□□□□ -0.86
UBFD1-205ENST00000566136 CMTM8Q8IZV2 173 aa9.7□□□□□ -0.86
UBFD1-205ENST00000566136 OR14K1Q8NGZ2 314 aa9.7□□□□□ -0.86
UBFD1-205ENST00000566136 MRPS31Q92665 395 aaKnown RBP9.7□□□□□ -0.86
UBFD1-205ENST00000566136 SFXN2Q96NB2 322 aa9.7□□□□□ -0.86
UBFD1-205ENST00000566136 HDHD2Q9H0R4 259 aa9.7□□□□□ -0.86
UBFD1-205ENST00000566136 Q9N2K0 584 aa9.7□□□□□ -0.86
UBFD1-205ENST00000566136 P2RX2Q9UBL9 471 aa9.7□□□□□ -0.86
UBFD1-205ENST00000566136 GNPTGQ9UJJ9 305 aa9.7□□□□□ -0.86
UBFD1-205ENST00000566136 DHDHQ9UQ10 334 aa9.7□□□□□ -0.86
UBFD1-205ENST00000566136 CSDC2Q9Y534 153 aaKnown RBP9.7□□□□□ -0.86
UBFD1-205ENST00000566136 SCN8AQ9UQD0 1980 aa9.69□□□□□ -0.86
UBFD1-205ENST00000566136 INPP4BO15327 924 aa9.69□□□□□ -0.86
UBFD1-205ENST00000566136 HSD17B1P14061 328 aa9.69□□□□□ -0.86
UBFD1-205ENST00000566136 ACRV1P26436 265 aa9.69□□□□□ -0.86
UBFD1-205ENST00000566136 CFHR2P36980 270 aa9.69□□□□□ -0.86
UBFD1-205ENST00000566136 HSPA13P48723 471 aa9.69□□□□□ -0.86
UBFD1-205ENST00000566136 TRAF3Q13114 568 aa9.69□□□□□ -0.86
UBFD1-205ENST00000566136 ZMAT1Q5H9K5 638 aa9.69□□□□□ -0.86
UBFD1-205ENST00000566136 CERS6Q6ZMG9 384 aa9.69□□□□□ -0.86
UBFD1-205ENST00000566136 ZNF517Q6ZMY9 492 aaPredicted RBP9.69□□□□□ -0.86
UBFD1-205ENST00000566136 ZAR1Q86SH2 424 aa9.69□□□□□ -0.86
UBFD1-205ENST00000566136 ITIH5Q86UX2 942 aa9.69□□□□□ -0.86
UBFD1-205ENST00000566136 LRRC56Q8IYG6 542 aaPredicted RBP9.69□□□□□ -0.86
UBFD1-205ENST00000566136 FAM58AQ8N1B3 248 aa9.69□□□□□ -0.86
UBFD1-205ENST00000566136 GPR26Q8NDV2 337 aa9.69□□□□□ -0.86
UBFD1-205ENST00000566136 SRFBP1Q8NEF9 429 aaKnown RBP9.69□□□□□ -0.86
UBFD1-205ENST00000566136 OR1L6Q8NGR2 347 aa9.69□□□□□ -0.86
UBFD1-205ENST00000566136 R3HDM4Q96D70 268 aa9.69□□□□□ -0.86
UBFD1-205ENST00000566136 MTERF1Q99551 399 aaKnown RBP9.69□□□□□ -0.86
UBFD1-205ENST00000566136 KCTD14Q9BQ13 255 aaPredicted RBP9.69□□□□□ -0.86
UBFD1-205ENST00000566136 RBM24Q9BX46 236 aaKnown RBP9.69□□□□□ -0.86
UBFD1-205ENST00000566136 RNF11Q9Y3C5 154 aa9.69□□□□□ -0.86
UBFD1-205ENST00000566136 HCN1O60741 890 aa9.68□□□□□ -0.86
UBFD1-205ENST00000566136 EEDO75530 441 aaKnown RBP9.68□□□□□ -0.86
UBFD1-205ENST00000566136 CCNB2O95067 398 aa9.68□□□□□ -0.86
UBFD1-205ENST00000566136 IGSF6O95976 241 aa9.68□□□□□ -0.86
UBFD1-205ENST00000566136 F10P00742 488 aa9.68□□□□□ -0.86
UBFD1-205ENST00000566136 PRNPP04156 253 aa9.68□□□□□ -0.86
UBFD1-205ENST00000566136 EPXP11678 715 aa9.68□□□□□ -0.86
UBFD1-205ENST00000566136 ETFAP13804 333 aa9.68□□□□□ -0.86
UBFD1-205ENST00000566136 MSH3P20585 1137 aa9.68□□□□□ -0.86
UBFD1-205ENST00000566136 HMOX2P30519 316 aa9.68□□□□□ -0.86
UBFD1-205ENST00000566136 TNFRSF4P43489 277 aa9.68□□□□□ -0.86
UBFD1-205ENST00000566136 MICBQ29980 383 aa9.68□□□□□ -0.86
UBFD1-205ENST00000566136 EXOC3L2Q2M3D2 409 aa9.68□□□□□ -0.86
UBFD1-205ENST00000566136 KHDRBS2Q5VWX1 349 aaKnown RBP9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms