RNA–Protein interactions for RNA: ENST00000564846.1

CLN6-205, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 1,762 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-205ENST00000564846 NXNL2Q5VZ03 156 aa17.8■□□□□ 0.44
CLN6-205ENST00000564846 DND1Q8IYX4 353 aaKnown RBP17.8■□□□□ 0.44
CLN6-205ENST00000564846 ARMC10Q8N2F6 343 aa17.8■□□□□ 0.44
CLN6-205ENST00000564846 CRELD1Q96HD1 420 aa17.8■□□□□ 0.44
CLN6-205ENST00000564846 CXorf56Q9H5V9 222 aa17.8■□□□□ 0.44
CLN6-205ENST00000564846 METTL7AQ9H8H3 244 aa17.8■□□□□ 0.44
CLN6-205ENST00000564846 GALNT9Q9HCQ5 603 aa17.8■□□□□ 0.44
CLN6-205ENST00000564846 CMC2Q9NRP2 79 aa17.8■□□□□ 0.44
CLN6-205ENST00000564846 NOL3O60936 208 aaKnown RBP17.79■□□□□ 0.44
CLN6-205ENST00000564846 TRMUO75648 421 aaKnown RBP17.79■□□□□ 0.44
CLN6-205ENST00000564846 FTH1P19P0C7X4 201 aa17.79■□□□□ 0.44
CLN6-205ENST00000564846 PSMB9P28065 219 aa17.79■□□□□ 0.44
CLN6-205ENST00000564846 GSTT1P30711 240 aa17.79■□□□□ 0.44
CLN6-205ENST00000564846 SOX3P41225 446 aa17.79■□□□□ 0.44
CLN6-205ENST00000564846 PRPS1P60891 318 aa17.79■□□□□ 0.44
CLN6-205ENST00000564846 EGR4Q05215 589 aa17.79■□□□□ 0.44
CLN6-205ENST00000564846 RNLSQ5VYX0 342 aa17.79■□□□□ 0.44
CLN6-205ENST00000564846 B3GNT6Q6ZMB0 384 aa17.79■□□□□ 0.44
CLN6-205ENST00000564846 LRRC17Q8N6Y2 441 aa17.79■□□□□ 0.44
CLN6-205ENST00000564846 ST8SIA1Q92185 356 aa17.79■□□□□ 0.44
CLN6-205ENST00000564846 DOK1Q99704 481 aa17.79■□□□□ 0.44
CLN6-205ENST00000564846 COL25A1Q9BXS0 654 aaPredicted RBP17.79■□□□□ 0.44
CLN6-205ENST00000564846 PTTG2Q9NZH5 202 aa17.79■□□□□ 0.44
CLN6-205ENST00000564846 EXPH5Q8NEV8 1989 aa17.79■□□□□ 0.44
CLN6-205ENST00000564846 IGLV3-32A0A0A0MS00 114 aa17.79■□□□□ 0.44
CLN6-205ENST00000564846 LRRN3E7EW58 273 aa17.79■□□□□ 0.44
CLN6-205ENST00000564846 M0R3G1 203 aa17.79■□□□□ 0.44
CLN6-205ENST00000564846 SLC25A12O75746 678 aa17.79■□□□□ 0.44
CLN6-205ENST00000564846 SLC2A10O95528 541 aa17.79■□□□□ 0.44
CLN6-205ENST00000564846 PPP1R3DO95685 299 aa17.79■□□□□ 0.44
CLN6-205ENST00000564846 PEPDP12955 493 aa17.79■□□□□ 0.44
CLN6-205ENST00000564846 DLSTP36957 453 aa17.79■□□□□ 0.44
CLN6-205ENST00000564846 CDH11P55287 796 aa17.79■□□□□ 0.44
CLN6-205ENST00000564846 RPS4XP62701 263 aaKnown RBP17.79■□□□□ 0.44
CLN6-205ENST00000564846 RAB40BQ12829 278 aa17.79■□□□□ 0.44
CLN6-205ENST00000564846 SNTA1Q13424 505 aa17.79■□□□□ 0.44
CLN6-205ENST00000564846 ANKDD1AQ495B1 522 aa17.79■□□□□ 0.44
CLN6-205ENST00000564846 OR5M10Q6IEU7 315 aa17.79■□□□□ 0.44
CLN6-205ENST00000564846 ARHGAP11AQ6P4F7 1023 aa17.79■□□□□ 0.44
CLN6-205ENST00000564846 RPS19BP1Q86WX3 136 aaKnown RBP17.79■□□□□ 0.44
CLN6-205ENST00000564846 C10orf53Q8N6V4 93 aa17.79■□□□□ 0.44
CLN6-205ENST00000564846 SECISBP2Q96T21 854 aaKnown RBP17.79■□□□□ 0.44
CLN6-205ENST00000564846 NANSQ9NR45 359 aa17.79■□□□□ 0.44
CLN6-205ENST00000564846 H2AFY2Q9P0M6 372 aaPredicted RBP17.79■□□□□ 0.44
CLN6-205ENST00000564846 PPP4R1LQ9P1A2 415 aa17.79■□□□□ 0.44
CLN6-205ENST00000564846 WIF1Q9Y5W5 379 aa17.79■□□□□ 0.44
CLN6-205ENST00000564846 C2orf72A6NCS6 295 aa17.78■□□□□ 0.44
CLN6-205ENST00000564846 STMND1H3BQB6 276 aa17.78■□□□□ 0.44
CLN6-205ENST00000564846 MAN1A2O60476 641 aa17.78■□□□□ 0.44
CLN6-205ENST00000564846 RAD1O60671 282 aa17.78■□□□□ 0.44
CLN6-205ENST00000564846 LCKP06239 509 aa17.78■□□□□ 0.44
CLN6-205ENST00000564846 PTGDSP41222 190 aa17.78■□□□□ 0.44
CLN6-205ENST00000564846 SSR4P51571 173 aa17.78■□□□□ 0.44
CLN6-205ENST00000564846 DLX5P56178 289 aa17.78■□□□□ 0.44
CLN6-205ENST00000564846 DPY19L2P2Q6ZN68 376 aa17.78■□□□□ 0.44
CLN6-205ENST00000564846 CXXC5Q7LFL8 322 aaKnown RBP17.78■□□□□ 0.44
CLN6-205ENST00000564846 GID4Q8IVV7 300 aa17.78■□□□□ 0.44
CLN6-205ENST00000564846 ASB15Q8WXK1 588 aa17.78■□□□□ 0.44
CLN6-205ENST00000564846 KTI12Q96EK9 354 aaPredicted RBP17.78■□□□□ 0.44
CLN6-205ENST00000564846 TSC22D3Q99576 134 aa17.78■□□□□ 0.44
CLN6-205ENST00000564846 CDCP1Q9H5V8 836 aa17.78■□□□□ 0.44
CLN6-205ENST00000564846 CPNE5Q9HCH3 593 aa17.78■□□□□ 0.44
CLN6-205ENST00000564846 HINT3Q9NQE9 182 aaKnown RBP17.78■□□□□ 0.44
CLN6-205ENST00000564846 FBXL4Q9UKA2 621 aa17.78■□□□□ 0.44
CLN6-205ENST00000564846 HIF3AQ9Y2N7 669 aa17.78■□□□□ 0.44
CLN6-205ENST00000564846 WDFY3Q8IZQ1 3526 aa17.77■□□□□ 0.44
CLN6-205ENST00000564846 PCNX2A6NKB5 2137 aa17.77■□□□□ 0.44
CLN6-205ENST00000564846 TMED7-TICAM2A0A0A6YYA0 188 aa17.77■□□□□ 0.44
CLN6-205ENST00000564846 RIIAD1A6NNX1 92 aa17.77■□□□□ 0.44
CLN6-205ENST00000564846 TERTO14746 1132 aaKnown RBP17.77■□□□□ 0.44
CLN6-205ENST00000564846 ADORA3P0DMS8 318 aa17.77■□□□□ 0.44
CLN6-205ENST00000564846 HK1P19367 917 aa17.77■□□□□ 0.44
CLN6-205ENST00000564846 NOS3P29474 1203 aa17.77■□□□□ 0.44
CLN6-205ENST00000564846 HTR1FP30939 366 aa17.77■□□□□ 0.44
CLN6-205ENST00000564846 CASP3P42574 277 aa17.77■□□□□ 0.44
CLN6-205ENST00000564846 MTNR1AP48039 350 aa17.77■□□□□ 0.44
CLN6-205ENST00000564846 MLF1P58340 268 aa17.77■□□□□ 0.44
CLN6-205ENST00000564846 CHAF1BQ13112 559 aa17.77■□□□□ 0.44
CLN6-205ENST00000564846 SLC35F1Q5T1Q4 408 aa17.77■□□□□ 0.44
CLN6-205ENST00000564846 BICRALQ6AI39 1079 aa17.77■□□□□ 0.44
CLN6-205ENST00000564846 TMEM81Q6P7N7 255 aa17.77■□□□□ 0.44
CLN6-205ENST00000564846 CPOQ8IVL8 374 aa17.77■□□□□ 0.44
CLN6-205ENST00000564846 RAB2BQ8WUD1 216 aa17.77■□□□□ 0.44
CLN6-205ENST00000564846 C12orf43Q96C57 262 aaKnown RBP17.77■□□□□ 0.44
CLN6-205ENST00000564846 RNFT2Q96EX2 444 aa17.77■□□□□ 0.44
CLN6-205ENST00000564846 FUNDC2Q9BWH2 189 aa17.77■□□□□ 0.44
CLN6-205ENST00000564846 ZNF229Q9UJW7 825 aa17.77■□□□□ 0.44
CLN6-205ENST00000564846 DIMT1Q9UNQ2 313 aaKnown RBP17.77■□□□□ 0.44
CLN6-205ENST00000564846 TMED7Q9Y3B3 224 aa17.77■□□□□ 0.44
CLN6-205ENST00000564846 CHCHD2Q9Y6H1 151 aaPredicted RBP17.77■□□□□ 0.44
CLN6-205ENST00000564846 TRAV36DV7A0A075B6V5 113 aa17.76■□□□□ 0.43
CLN6-205ENST00000564846 SPAARA0A1B0GVQ0 90 aa17.76■□□□□ 0.43
CLN6-205ENST00000564846 A8MVM7 634 aa17.76■□□□□ 0.43
CLN6-205ENST00000564846 SUSD5O60279 629 aa17.76■□□□□ 0.43
CLN6-205ENST00000564846 RAB36O95755 333 aa17.76■□□□□ 0.43
CLN6-205ENST00000564846 IFNGP01579 166 aa17.76■□□□□ 0.43
CLN6-205ENST00000564846 ASAH2BP0C7U1 165 aa17.76■□□□□ 0.43
CLN6-205ENST00000564846 PRKCAP17252 672 aa17.76■□□□□ 0.43
CLN6-205ENST00000564846 CCNA2P20248 432 aa17.76■□□□□ 0.43
CLN6-205ENST00000564846 C5orf46Q6UWT4 87 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms