RNA–Protein interactions for RNA: ENST00000563492.1

CDH11-208, Transcript of cadherin 11, human

TSL 5

Gene CDH11, Length 468 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDH11-208	ENST00000563492	TMCC2	O75069	709 aa		6.06	□□□□□ -1.44
CDH11-208	ENST00000563492	MRPL33	O75394	65 aa	Known RBP	6.06	□□□□□ -1.44
CDH11-208	ENST00000563492	AKR7A3	O95154	331 aa		6.06	□□□□□ -1.44
CDH11-208	ENST00000563492	PMS2P2	O95744	297 aa		6.06	□□□□□ -1.44
CDH11-208	ENST00000563492	AK1	P00568	194 aa		6.06	□□□□□ -1.44
CDH11-208	ENST00000563492	LBP	P18428	481 aa		6.06	□□□□□ -1.44
CDH11-208	ENST00000563492	CDH2	P19022	906 aa	Predicted RBP	6.06	□□□□□ -1.44
CDH11-208	ENST00000563492	CD40	P25942	277 aa		6.06	□□□□□ -1.44
CDH11-208	ENST00000563492	EPHA3	P29320	983 aa		6.06	□□□□□ -1.44
CDH11-208	ENST00000563492	TTK	P33981	857 aa		6.06	□□□□□ -1.44
CDH11-208	ENST00000563492	KHK	P50053	298 aa		6.06	□□□□□ -1.44
CDH11-208	ENST00000563492	MVD	P53602	400 aa		6.06	□□□□□ -1.44
CDH11-208	ENST00000563492	WDR4	P57081	412 aa	Known RBP	6.06	□□□□□ -1.44
CDH11-208	ENST00000563492	CSNK2A1	P68400	391 aa	Predicted RBP	6.06	□□□□□ -1.44
CDH11-208	ENST00000563492	H3F3A	P84243	136 aa		6.06	□□□□□ -1.44
CDH11-208	ENST00000563492	DMTN	Q08495	405 aa		6.06	□□□□□ -1.44
CDH11-208	ENST00000563492	MAD2L1	Q13257	205 aa	Predicted RBP	6.06	□□□□□ -1.44
CDH11-208	ENST00000563492	STX3	Q13277	289 aa		6.06	□□□□□ -1.44
CDH11-208	ENST00000563492	PDK3	Q15120	406 aa		6.06	□□□□□ -1.44
CDH11-208	ENST00000563492	SMU1	Q2TAY7	513 aa		6.06	□□□□□ -1.44
CDH11-208	ENST00000563492	GTDC1	Q4AE62	458 aa		6.06	□□□□□ -1.44
CDH11-208	ENST00000563492	ATAD3B	Q5T9A4	648 aa		6.06	□□□□□ -1.44
CDH11-208	ENST00000563492	ANXA8L1	Q5VT79	327 aa		6.06	□□□□□ -1.44
CDH11-208	ENST00000563492	C11orf71	Q6IPW1	123 aa		6.06	□□□□□ -1.44
CDH11-208	ENST00000563492	SLC22A25	Q6T423	547 aa		6.06	□□□□□ -1.44
CDH11-208	ENST00000563492	ZNF621	Q6ZSS3	439 aa		6.06	□□□□□ -1.44
CDH11-208	ENST00000563492	CXXC5	Q7LFL8	322 aa	Known RBP	6.06	□□□□□ -1.44
CDH11-208	ENST00000563492	GRINA	Q7Z429	371 aa		6.06	□□□□□ -1.44
CDH11-208	ENST00000563492	VRK2	Q86Y07	508 aa		6.06	□□□□□ -1.44
CDH11-208	ENST00000563492	ARFGAP2	Q8N6H7	521 aa		6.06	□□□□□ -1.44
CDH11-208	ENST00000563492	ZNF525	Q8N782	197 aa		6.06	□□□□□ -1.44
CDH11-208	ENST00000563492	TMEM99	Q8N816	258 aa		6.06	□□□□□ -1.44
CDH11-208	ENST00000563492	ANKRD42	Q8N9B4	389 aa		6.06	□□□□□ -1.44
CDH11-208	ENST00000563492	TESC	Q96BS2	214 aa		6.06	□□□□□ -1.44
CDH11-208	ENST00000563492	HS6ST2	Q96MM7	605 aa		6.06	□□□□□ -1.44
CDH11-208	ENST00000563492	CCDC115	Q96NT0	180 aa		6.06	□□□□□ -1.44
CDH11-208	ENST00000563492	ZNF385A	Q96PM9	386 aa	Known RBP	6.06	□□□□□ -1.44
CDH11-208	ENST00000563492	PAIP2	Q9BPZ3	127 aa	Known RBP	6.06	□□□□□ -1.44
CDH11-208	ENST00000563492	RSPO3	Q9BXY4	272 aa	Predicted RBP	6.06	□□□□□ -1.44
CDH11-208	ENST00000563492	PARD6B	Q9BYG5	372 aa		6.06	□□□□□ -1.44
CDH11-208	ENST00000563492	CENPH	Q9H3R5	247 aa		6.06	□□□□□ -1.44
CDH11-208	ENST00000563492	MEAF6	Q9HAF1	191 aa		6.06	□□□□□ -1.44
CDH11-208	ENST00000563492	KCNK9	Q9NPC2	374 aa		6.06	□□□□□ -1.44
CDH11-208	ENST00000563492	ST6GALNAC1	Q9NSC7	600 aa	Predicted RBP	6.06	□□□□□ -1.44
CDH11-208	ENST00000563492	AIG1	Q9NVV5	245 aa		6.06	□□□□□ -1.44
CDH11-208	ENST00000563492	ASB6	Q9NWX5	421 aa		6.06	□□□□□ -1.44
CDH11-208	ENST00000563492	TMEM181	Q9P2C4	612 aa		6.06	□□□□□ -1.44
CDH11-208	ENST00000563492	HAO1	Q9UJM8	370 aa		6.06	□□□□□ -1.44
CDH11-208	ENST00000563492	SLC35A3	Q9Y2D2	325 aa		6.06	□□□□□ -1.44
CDH11-208	ENST00000563492	EPB41L3	Q9Y2J2	1087 aa	Predicted RBP	6.06	□□□□□ -1.44
CDH11-208	ENST00000563492	CHST2	Q9Y4C5	530 aa		6.06	□□□□□ -1.44
CDH11-208	ENST00000563492	FLVCR1	Q9Y5Y0	555 aa		6.06	□□□□□ -1.44
CDH11-208	ENST00000563492	GPR45	Q9Y5Y3	372 aa		6.06	□□□□□ -1.44
CDH11-208	ENST00000563492	RTTN	Q86VV8	2226 aa		6.06	□□□□□ -1.44
CDH11-208	ENST00000563492	CD5L	O43866	347 aa		6.05	□□□□□ -1.44
CDH11-208	ENST00000563492	GUSB	P08236	651 aa		6.05	□□□□□ -1.44
CDH11-208	ENST00000563492	KIT	P10721	976 aa		6.05	□□□□□ -1.44
CDH11-208	ENST00000563492	ETFA	P13804	333 aa		6.05	□□□□□ -1.44
CDH11-208	ENST00000563492	ACAA2	P42765	397 aa	Known RBP	6.05	□□□□□ -1.44
CDH11-208	ENST00000563492	FABP6	P51161	128 aa		6.05	□□□□□ -1.44
CDH11-208	ENST00000563492	SLC16A1	P53985	500 aa		6.05	□□□□□ -1.44
CDH11-208	ENST00000563492	TUBA1B	P68363	451 aa		6.05	□□□□□ -1.44
CDH11-208	ENST00000563492	TUBA4A	P68366	448 aa		6.05	□□□□□ -1.44
CDH11-208	ENST00000563492	HOXC5	Q00444	222 aa		6.05	□□□□□ -1.44
CDH11-208	ENST00000563492	SRSF2	Q01130	221 aa	Known RBP	6.05	□□□□□ -1.44
CDH11-208	ENST00000563492	CEACAM7	Q14002	265 aa		6.05	□□□□□ -1.44
CDH11-208	ENST00000563492	SLC17A1	Q14916	467 aa		6.05	□□□□□ -1.44
CDH11-208	ENST00000563492	MST1L	Q2TV78	715 aa		6.05	□□□□□ -1.44
CDH11-208	ENST00000563492	HIKESHI	Q53FT3	197 aa		6.05	□□□□□ -1.44
CDH11-208	ENST00000563492	TNFAIP8L3	Q5GJ75	292 aa		6.05	□□□□□ -1.44
CDH11-208	ENST00000563492	RPS26P11	Q5JNZ5	115 aa	Predicted RBP	6.05	□□□□□ -1.44
CDH11-208	ENST00000563492	CEP85L	Q5SZL2	805 aa		6.05	□□□□□ -1.44
CDH11-208	ENST00000563492	MRPL2	Q5T653	305 aa	Known RBP	6.05	□□□□□ -1.44
CDH11-208	ENST00000563492	AGAP6	Q5VW22	663 aa		6.05	□□□□□ -1.44
CDH11-208	ENST00000563492	HMBOX1	Q6NT76	420 aa		6.05	□□□□□ -1.44
CDH11-208	ENST00000563492	WDR93	Q6P2C0	686 aa		6.05	□□□□□ -1.44
CDH11-208	ENST00000563492	CASP12	Q6UXS9	341 aa		6.05	□□□□□ -1.44
CDH11-208	ENST00000563492	TUBA1A	Q71U36	451 aa		6.05	□□□□□ -1.44
CDH11-208	ENST00000563492	LINGO2	Q7L985	606 aa		6.05	□□□□□ -1.44
CDH11-208	ENST00000563492	MAVS	Q7Z434	540 aa		6.05	□□□□□ -1.44
CDH11-208	ENST00000563492	P2RY8	Q86VZ1	359 aa		6.05	□□□□□ -1.44
CDH11-208	ENST00000563492	CLIP4	Q8N3C7	705 aa		6.05	□□□□□ -1.44
CDH11-208	ENST00000563492	MREG	Q8N565	214 aa		6.05	□□□□□ -1.44
CDH11-208	ENST00000563492	OR10H5	Q8NGA6	315 aa		6.05	□□□□□ -1.44
CDH11-208	ENST00000563492	MGARP	Q8TDB4	240 aa		6.05	□□□□□ -1.44
CDH11-208	ENST00000563492	SLC25A43	Q8WUT9	341 aa	Predicted RBP	6.05	□□□□□ -1.44
CDH11-208	ENST00000563492	VPS33A	Q96AX1	596 aa		6.05	□□□□□ -1.44
CDH11-208	ENST00000563492	ARL8A	Q96BM9	186 aa		6.05	□□□□□ -1.44
CDH11-208	ENST00000563492	AURKB	Q96GD4	344 aa	Predicted RBP	6.05	□□□□□ -1.44
CDH11-208	ENST00000563492	RADIL	Q96JH8	1075 aa		6.05	□□□□□ -1.44
CDH11-208	ENST00000563492	TRNT1	Q96Q11	434 aa	Known RBP	6.05	□□□□□ -1.44
CDH11-208	ENST00000563492	OR52E6	Q96RD3	313 aa		6.05	□□□□□ -1.44
CDH11-208	ENST00000563492	PANX1	Q96RD7	426 aa		6.05	□□□□□ -1.44
CDH11-208	ENST00000563492	DHRS9	Q9BPW9	319 aa		6.05	□□□□□ -1.44
CDH11-208	ENST00000563492	USB1	Q9BQ65	265 aa	Known RBP	6.05	□□□□□ -1.44
CDH11-208	ENST00000563492	ADAM19	Q9H013	955 aa		6.05	□□□□□ -1.44
CDH11-208	ENST00000563492	ALG2	Q9H553	416 aa		6.05	□□□□□ -1.44
CDH11-208	ENST00000563492	MANSC1	Q9H8J5	431 aa		6.05	□□□□□ -1.44
CDH11-208	ENST00000563492	MTHFD2L	Q9H903	347 aa	Predicted RBP	6.05	□□□□□ -1.44
CDH11-208	ENST00000563492	EXOSC3	Q9NQT5	275 aa	Known RBP	6.05	□□□□□ -1.44

Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms