RNA–Protein interactions for RNA: ENST00000563220.1

COMMD4-208, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 1,897 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-208ENST00000563220 GTF2IRD2BQ6EKJ0 949 aa16.4■□□□□ 0.22
COMMD4-208ENST00000563220 RPL13AP3Q6NVV1 102 aa16.4■□□□□ 0.22
COMMD4-208ENST00000563220 OPN5Q6U736 354 aa16.4■□□□□ 0.22
COMMD4-208ENST00000563220 GTF2IRD2Q86UP8 949 aa16.4■□□□□ 0.22
COMMD4-208ENST00000563220 FAR1Q8WVX9 515 aa16.4■□□□□ 0.22
COMMD4-208ENST00000563220 NKD1Q969G9 470 aa16.4■□□□□ 0.22
COMMD4-208ENST00000563220 KTI12Q96EK9 354 aaPredicted RBP16.4■□□□□ 0.22
COMMD4-208ENST00000563220 ZNF582Q96NG8 517 aaPredicted RBP16.4■□□□□ 0.22
COMMD4-208ENST00000563220 NPAS1Q99742 590 aa16.4■□□□□ 0.22
COMMD4-208ENST00000563220 TUBA1CQ9BQE3 449 aa16.4■□□□□ 0.22
COMMD4-208ENST00000563220 PROB1E7EW31 1015 aa16.39■□□□□ 0.22
COMMD4-208ENST00000563220 IGF2P01344 180 aa16.39■□□□□ 0.22
COMMD4-208ENST00000563220 HMGN1P05114 100 aa16.39■□□□□ 0.22
COMMD4-208ENST00000563220 CXCR1P25024 350 aa16.39■□□□□ 0.22
COMMD4-208ENST00000563220 SSR4P51571 173 aa16.39■□□□□ 0.22
COMMD4-208ENST00000563220 ST3GAL4Q11206 333 aa16.39■□□□□ 0.22
COMMD4-208ENST00000563220 CHAF1BQ13112 559 aa16.39■□□□□ 0.22
COMMD4-208ENST00000563220 RTL4Q6ZR62 310 aa16.39■□□□□ 0.22
COMMD4-208ENST00000563220 ADGRG3Q86Y34 549 aa16.39■□□□□ 0.22
COMMD4-208ENST00000563220 LNX2Q8N448 690 aa16.39■□□□□ 0.22
COMMD4-208ENST00000563220 ASB15Q8WXK1 588 aa16.39■□□□□ 0.22
COMMD4-208ENST00000563220 MYDGFQ969H8 173 aa16.39■□□□□ 0.22
COMMD4-208ENST00000563220 DOK1Q99704 481 aa16.39■□□□□ 0.22
COMMD4-208ENST00000563220 IFT27Q9BW83 186 aa16.39■□□□□ 0.22
COMMD4-208ENST00000563220 LHPPQ9H008 270 aa16.39■□□□□ 0.22
COMMD4-208ENST00000563220 WIF1Q9Y5W5 379 aa16.39■□□□□ 0.22
COMMD4-208ENST00000563220 EXPH5Q8NEV8 1989 aa16.39■□□□□ 0.21
COMMD4-208ENST00000563220 PCNX3Q9H6A9 2034 aa16.39■□□□□ 0.21
COMMD4-208ENST00000563220 INMTO95050 263 aa16.39■□□□□ 0.21
COMMD4-208ENST00000563220 FADS2O95864 444 aaKnown RBP16.39■□□□□ 0.21
COMMD4-208ENST00000563220 POLR2HP52434 150 aaKnown RBP16.39■□□□□ 0.21
COMMD4-208ENST00000563220 ZNF74Q16587 644 aa16.39■□□□□ 0.21
COMMD4-208ENST00000563220 SLC35F1Q5T1Q4 408 aa16.39■□□□□ 0.21
COMMD4-208ENST00000563220 ZNF468Q5VIY5 522 aaPredicted RBP16.39■□□□□ 0.21
COMMD4-208ENST00000563220 C1QL3Q5VWW1 255 aa16.39■□□□□ 0.21
COMMD4-208ENST00000563220 MEDAGQ5VYS4 303 aa16.39■□□□□ 0.21
COMMD4-208ENST00000563220 B3GNTL1Q67FW5 361 aaPredicted RBP16.39■□□□□ 0.21
COMMD4-208ENST00000563220 ARSKQ6UWY0 536 aa16.39■□□□□ 0.21
COMMD4-208ENST00000563220 GRINAQ7Z429 371 aa16.39■□□□□ 0.21
COMMD4-208ENST00000563220 MUL1Q969V5 352 aa16.39■□□□□ 0.21
COMMD4-208ENST00000563220 ISOC1Q96CN7 298 aa16.39■□□□□ 0.21
COMMD4-208ENST00000563220 MOGAT1Q96PD6 335 aa16.39■□□□□ 0.21
COMMD4-208ENST00000563220 TEX12Q9BXU0 123 aa16.39■□□□□ 0.21
COMMD4-208ENST00000563220 PRRG3Q9BZD7 231 aa16.39■□□□□ 0.21
COMMD4-208ENST00000563220 CNOT2Q9NZN8 540 aaKnown RBP16.39■□□□□ 0.21
COMMD4-208ENST00000563220 PPP4R1LQ9P1A2 415 aa16.39■□□□□ 0.21
COMMD4-208ENST00000563220 IGLV3-32A0A0A0MS00 114 aa16.38■□□□□ 0.21
COMMD4-208ENST00000563220 TMED7-TICAM2A0A0A6YYA0 188 aa16.38■□□□□ 0.21
COMMD4-208ENST00000563220 TMEM72A0PK05 275 aa16.38■□□□□ 0.21
COMMD4-208ENST00000563220 ZC3H12DA2A288 527 aaKnown RBP16.38■□□□□ 0.21
COMMD4-208ENST00000563220 EFCAB10A6NFE3 127 aa16.38■□□□□ 0.21
COMMD4-208ENST00000563220 CDRT15L2A8MXV6 281 aa16.38■□□□□ 0.21
COMMD4-208ENST00000563220 TP53I11O14683 189 aa16.38■□□□□ 0.21
COMMD4-208ENST00000563220 SERPINA7P05543 415 aa16.38■□□□□ 0.21
COMMD4-208ENST00000563220 CEACAM1P13688 526 aa16.38■□□□□ 0.21
COMMD4-208ENST00000563220 GRK5P34947 590 aa16.38■□□□□ 0.21
COMMD4-208ENST00000563220 SLC9A3P48764 834 aa16.38■□□□□ 0.21
COMMD4-208ENST00000563220 SUMO3P55854 103 aaPredicted RBP16.38■□□□□ 0.21
COMMD4-208ENST00000563220 FOXK2Q01167 660 aa16.38■□□□□ 0.21
COMMD4-208ENST00000563220 ZNF91Q05481 1191 aa16.38■□□□□ 0.21
COMMD4-208ENST00000563220 ATP1A4Q13733 1029 aa16.38■□□□□ 0.21
COMMD4-208ENST00000563220 GXYLT1Q4G148 440 aa16.38■□□□□ 0.21
COMMD4-208ENST00000563220 PRAMEF20Q5VT98 475 aa16.38■□□□□ 0.21
COMMD4-208ENST00000563220 H3F3CQ6NXT2 135 aa16.38■□□□□ 0.21
COMMD4-208ENST00000563220 STX19Q8N4C7 294 aa16.38■□□□□ 0.21
COMMD4-208ENST00000563220 ANKK1Q8NFD2 765 aa16.38■□□□□ 0.21
COMMD4-208ENST00000563220 OR13F1Q8NGS4 319 aa16.38■□□□□ 0.21
COMMD4-208ENST00000563220 ADAMTS17Q8TE56 1095 aa16.38■□□□□ 0.21
COMMD4-208ENST00000563220 LIPHQ8WWY8 451 aa16.38■□□□□ 0.21
COMMD4-208ENST00000563220 TAAR8Q969N4 342 aa16.38■□□□□ 0.21
COMMD4-208ENST00000563220 ACOT13Q9NPJ3 140 aa16.38■□□□□ 0.21
COMMD4-208ENST00000563220 MED17Q9NVC6 651 aa16.38■□□□□ 0.21
COMMD4-208ENST00000563220 TMED7Q9Y3B3 224 aa16.38■□□□□ 0.21
COMMD4-208ENST00000563220 ZNF337Q9Y3M9 751 aa16.38■□□□□ 0.21
COMMD4-208ENST00000563220 RPL36Q9Y3U8 105 aaKnown RBP16.38■□□□□ 0.21
COMMD4-208ENST00000563220 HTR3EA5X5Y0 456 aa16.37■□□□□ 0.21
COMMD4-208ENST00000563220 TRIM64BA6NI03 449 aa16.37■□□□□ 0.21
COMMD4-208ENST00000563220 PPP1R3DO95685 299 aa16.37■□□□□ 0.21
COMMD4-208ENST00000563220 DBTP11182 482 aaKnown RBP16.37■□□□□ 0.21
COMMD4-208ENST00000563220 PRKCAP17252 672 aa16.37■□□□□ 0.21
COMMD4-208ENST00000563220 DCKP27707 260 aa16.37■□□□□ 0.21
COMMD4-208ENST00000563220 NOVA1P51513 510 aaKnown RBP16.37■□□□□ 0.21
COMMD4-208ENST00000563220 AADACL4Q5VUY2 407 aa16.37■□□□□ 0.21
COMMD4-208ENST00000563220 CCDC81Q6ZN84 652 aa16.37■□□□□ 0.21
COMMD4-208ENST00000563220 DTX1Q86Y01 620 aa16.37■□□□□ 0.21
COMMD4-208ENST00000563220 CLVS1Q8IUQ0 354 aaPredicted RBP16.37■□□□□ 0.21
COMMD4-208ENST00000563220 TMEM156Q8N614 296 aa16.37■□□□□ 0.21
COMMD4-208ENST00000563220 SIRT6Q8N6T7 355 aa16.37■□□□□ 0.21
COMMD4-208ENST00000563220 PLEKHA8Q96JA3 519 aa16.37■□□□□ 0.21
COMMD4-208ENST00000563220 FAM117AQ9C073 453 aa16.37■□□□□ 0.21
COMMD4-208ENST00000563220 SH2D2AQ9NP31 389 aa16.37■□□□□ 0.21
COMMD4-208ENST00000563220 SDHAF3Q9NRP4 125 aa16.37■□□□□ 0.21
COMMD4-208ENST00000563220 DMXL1Q9Y485 3027 aa16.37■□□□□ 0.21
COMMD4-208ENST00000563220 CUL9Q8IWT3 2517 aa16.37■□□□□ 0.21
COMMD4-208ENST00000563220 TNFSF12-TNFSF13A0A0A6YY99 330 aa16.37■□□□□ 0.21
COMMD4-208ENST00000563220 A0A1B0GVG6 124 aa16.37■□□□□ 0.21
COMMD4-208ENST00000563220 KDM4EB2RXH2 506 aaPredicted RBP16.37■□□□□ 0.21
COMMD4-208ENST00000563220 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.37■□□□□ 0.21
COMMD4-208ENST00000563220 SUSD5O60279 629 aa16.37■□□□□ 0.21
COMMD4-208ENST00000563220 SEC14L2O76054 403 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 154.4 ms