RNA–Protein interactions for RNA: ENST00000561976.5

VPS9D1-202, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-202ENST00000561976 ZCCHC4Q9H5U6 513 aa12.88□□□□□ -0.35
VPS9D1-202ENST00000561976 NOX4Q9NPH5 578 aa12.88□□□□□ -0.35
VPS9D1-202ENST00000561976 C12orf4Q9NQ89 552 aa12.88□□□□□ -0.35
VPS9D1-202ENST00000561976 PHPT1Q9NRX4 125 aaPredicted RBP12.88□□□□□ -0.35
VPS9D1-202ENST00000561976 CREBZFQ9NS37 354 aa12.88□□□□□ -0.35
VPS9D1-202ENST00000561976 KLHL9Q9P2J3 617 aa12.88□□□□□ -0.35
VPS9D1-202ENST00000561976 KLK11Q9UBX7 282 aa12.88□□□□□ -0.35
VPS9D1-202ENST00000561976 KCNE5Q9UJ90 142 aa12.88□□□□□ -0.35
VPS9D1-202ENST00000561976 hCG_1807616A0A1W2PRN6 198 aa12.88□□□□□ -0.35
VPS9D1-202ENST00000561976 ZNF879B4DU55 563 aa12.88□□□□□ -0.35
VPS9D1-202ENST00000561976 PRICKLE3O43900 615 aaPredicted RBP12.88□□□□□ -0.35
VPS9D1-202ENST00000561976 GATBO75879 557 aaKnown RBP12.88□□□□□ -0.35
VPS9D1-202ENST00000561976 KRT33AO76009 404 aa12.88□□□□□ -0.35
VPS9D1-202ENST00000561976 CSF2RAP15509 400 aa12.88□□□□□ -0.35
VPS9D1-202ENST00000561976 SLC6A6P31641 620 aa12.88□□□□□ -0.35
VPS9D1-202ENST00000561976 PSMA6P60900 246 aaKnown RBP12.88□□□□□ -0.35
VPS9D1-202ENST00000561976 SNRPNP63162 240 aaKnown RBP12.88□□□□□ -0.35
VPS9D1-202ENST00000561976 ARHGAP11AQ6P4F7 1023 aa12.88□□□□□ -0.35
VPS9D1-202ENST00000561976 FCRLAQ7L513 359 aa12.88□□□□□ -0.35
VPS9D1-202ENST00000561976 GRAMD2AQ8IUY3 354 aa12.88□□□□□ -0.35
VPS9D1-202ENST00000561976 UXS1Q8NBZ7 420 aa12.88□□□□□ -0.35
VPS9D1-202ENST00000561976 OR4E2Q8NGC2 313 aa12.88□□□□□ -0.35
VPS9D1-202ENST00000561976 FCAMRQ8WWV6 532 aa12.88□□□□□ -0.35
VPS9D1-202ENST00000561976 RSPRY1Q96DX4 576 aa12.88□□□□□ -0.35
VPS9D1-202ENST00000561976 CNN2Q99439 309 aaKnown RBP12.88□□□□□ -0.35
VPS9D1-202ENST00000561976 NOX3Q9HBY0 568 aa12.88□□□□□ -0.35
VPS9D1-202ENST00000561976 PRSS16Q9NQE7 514 aa12.88□□□□□ -0.35
VPS9D1-202ENST00000561976 ZNF275Q9NSD4 429 aaPredicted RBP12.88□□□□□ -0.35
VPS9D1-202ENST00000561976 NTMQ9P121 344 aa12.88□□□□□ -0.35
VPS9D1-202ENST00000561976 SCML1Q9UN30 329 aa12.88□□□□□ -0.35
VPS9D1-202ENST00000561976 A0A1B0GUH1 482 aa12.87□□□□□ -0.35
VPS9D1-202ENST00000561976 LRRC72A6NJI9 287 aa12.87□□□□□ -0.35
VPS9D1-202ENST00000561976 PTP4A3O75365 173 aa12.87□□□□□ -0.35
VPS9D1-202ENST00000561976 RGS11O94810 467 aa12.87□□□□□ -0.35
VPS9D1-202ENST00000561976 EPCAMP16422 314 aa12.87□□□□□ -0.35
VPS9D1-202ENST00000561976 SRMP19623 302 aa12.87□□□□□ -0.35
VPS9D1-202ENST00000561976 CLDN12P56749 244 aa12.87□□□□□ -0.35
VPS9D1-202ENST00000561976 STX4Q12846 297 aa12.87□□□□□ -0.35
VPS9D1-202ENST00000561976 NOGQ13253 232 aa12.87□□□□□ -0.35
VPS9D1-202ENST00000561976 FAAP20Q6NZ36 180 aa12.87□□□□□ -0.35
VPS9D1-202ENST00000561976 FAM198BQ6UWH4 519 aa12.87□□□□□ -0.35
VPS9D1-202ENST00000561976 SLC35F2Q8IXU6 374 aa12.87□□□□□ -0.35
VPS9D1-202ENST00000561976 SAMD14Q8IZD0 417 aaPredicted RBP12.87□□□□□ -0.35
VPS9D1-202ENST00000561976 POT1Q9NUX5 634 aa12.87□□□□□ -0.35
VPS9D1-202ENST00000561976 KIF25Q9UIL4 384 aa12.87□□□□□ -0.35
VPS9D1-202ENST00000561976 BAIAP2Q9UQB8 552 aa12.87□□□□□ -0.35
VPS9D1-202ENST00000561976 INSL6Q9Y581 213 aa12.87□□□□□ -0.35
VPS9D1-202ENST00000561976 NAP1L6A6NFF2 107 aa12.87□□□□□ -0.35
VPS9D1-202ENST00000561976 ACOD1A6NK06 481 aa12.87□□□□□ -0.35
VPS9D1-202ENST00000561976 GABARAPH6UMI1 98 aa12.87□□□□□ -0.35
VPS9D1-202ENST00000561976 ITGA10O75578 1167 aa12.87□□□□□ -0.35
VPS9D1-202ENST00000561976 TSPAN9O75954 239 aa12.87□□□□□ -0.35
VPS9D1-202ENST00000561976 OR2T7P0C7T2 308 aa12.87□□□□□ -0.35
VPS9D1-202ENST00000561976 TLX1P31314 330 aaPredicted RBP12.87□□□□□ -0.35
VPS9D1-202ENST00000561976 WASP42768 502 aa12.87□□□□□ -0.35
VPS9D1-202ENST00000561976 MAP2K6P52564 334 aa12.87□□□□□ -0.35
VPS9D1-202ENST00000561976 RPS11P62280 158 aaKnown RBP eCLIP12.87□□□□□ -0.35
VPS9D1-202ENST00000561976 RPL22L1Q6P5R6 122 aaKnown RBP12.87□□□□□ -0.35
VPS9D1-202ENST00000561976 VN1R4Q7Z5H5 301 aa12.87□□□□□ -0.35
VPS9D1-202ENST00000561976 MRPL43Q8N983 215 aaKnown RBP12.87□□□□□ -0.35
VPS9D1-202ENST00000561976 OR2T27Q8NH04 317 aa12.87□□□□□ -0.35
VPS9D1-202ENST00000561976 C1orf216Q8TAB5 229 aa12.87□□□□□ -0.35
VPS9D1-202ENST00000561976 NANSQ9NR45 359 aa12.87□□□□□ -0.35
VPS9D1-202ENST00000561976 CA10Q9NS85 328 aa12.87□□□□□ -0.35
VPS9D1-202ENST00000561976 SDHAF2Q9NX18 166 aa12.87□□□□□ -0.35
VPS9D1-202ENST00000561976 SESN1Q9Y6P5 492 aa12.87□□□□□ -0.35
VPS9D1-202ENST00000561976 GNB5O14775 395 aa12.86□□□□□ -0.35
VPS9D1-202ENST00000561976 DNAJB6O75190 326 aa12.86□□□□□ -0.35
VPS9D1-202ENST00000561976 PTHLHP12272 177 aa12.86□□□□□ -0.35
VPS9D1-202ENST00000561976 CPMP14384 443 aa12.86□□□□□ -0.35
VPS9D1-202ENST00000561976 CXCL2P19875 107 aa12.86□□□□□ -0.35
VPS9D1-202ENST00000561976 ANXA7P20073 488 aaKnown RBP12.86□□□□□ -0.35
VPS9D1-202ENST00000561976 EPHA4P54764 986 aa12.86□□□□□ -0.35
VPS9D1-202ENST00000561976 HTR4Q13639 388 aa12.86□□□□□ -0.35
VPS9D1-202ENST00000561976 ZNF425Q6IV72 752 aa12.86□□□□□ -0.35
VPS9D1-202ENST00000561976 FAM199XQ6PEV8 388 aaPredicted RBP12.86□□□□□ -0.35
VPS9D1-202ENST00000561976 OR6V1Q8N148 313 aa12.86□□□□□ -0.35
VPS9D1-202ENST00000561976 SYS1Q8N2H4 156 aa12.86□□□□□ -0.35
VPS9D1-202ENST00000561976 FAM71CQ8NEG0 241 aa12.86□□□□□ -0.35
VPS9D1-202ENST00000561976 RIT1Q92963 219 aa12.86□□□□□ -0.35
VPS9D1-202ENST00000561976 PTCHD1Q96NR3 888 aa12.86□□□□□ -0.35
VPS9D1-202ENST00000561976 NPDC1Q9NQX5 325 aaPredicted RBP12.86□□□□□ -0.35
VPS9D1-202ENST00000561976 TAS2R10Q9NYW0 307 aa12.86□□□□□ -0.35
VPS9D1-202ENST00000561976 SCN2AQ99250 2005 aa12.86□□□□□ -0.35
VPS9D1-202ENST00000561976 ZNF860A6NHJ4 632 aa12.86□□□□□ -0.35
VPS9D1-202ENST00000561976 GPR89AB7ZAQ6 455 aa12.86□□□□□ -0.35
VPS9D1-202ENST00000561976 SLC35G6P0C7Q6 338 aa12.86□□□□□ -0.35
VPS9D1-202ENST00000561976 GPR89BP0CG08 455 aa12.86□□□□□ -0.35
VPS9D1-202ENST00000561976 HIST1H1CP16403 213 aaKnown RBP12.86□□□□□ -0.35
VPS9D1-202ENST00000561976 TYRP1P17643 537 aa12.86□□□□□ -0.35
VPS9D1-202ENST00000561976 DRD3P35462 400 aa12.86□□□□□ -0.35
VPS9D1-202ENST00000561976 BTN1A1Q13410 526 aa12.86□□□□□ -0.35
VPS9D1-202ENST00000561976 GLDNQ6ZMI3 551 aaPredicted RBP12.86□□□□□ -0.35
VPS9D1-202ENST00000561976 KCTD20Q7Z5Y7 419 aa12.86□□□□□ -0.35
VPS9D1-202ENST00000561976 LINC00052Q96N35 136 aa12.86□□□□□ -0.35
VPS9D1-202ENST00000561976 TIMM29Q9BSF4 260 aa12.86□□□□□ -0.35
VPS9D1-202ENST00000561976 SARGQ9BW04 601 aa12.86□□□□□ -0.35
VPS9D1-202ENST00000561976 WSB2Q9NYS7 404 aaPredicted RBP12.86□□□□□ -0.35
VPS9D1-202ENST00000561976 CXXC1Q9P0U4 656 aaPredicted RBP12.86□□□□□ -0.35
VPS9D1-202ENST00000561976 KLF15Q9UIH9 416 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms