RNA–Protein interactions for RNA: ENST00000561817.5

CAPN3-210, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-210ENST00000561817 IGF2P01344 180 aa5.96□□□□□ -1.46
CAPN3-210ENST00000561817 PIPP12273 146 aaPredicted RBP5.96□□□□□ -1.46
CAPN3-210ENST00000561817 FUT1P19526 365 aa5.96□□□□□ -1.46
CAPN3-210ENST00000561817 EEF1B2P24534 225 aaKnown RBP5.96□□□□□ -1.46
CAPN3-210ENST00000561817 IFNA8P32881 189 aa5.96□□□□□ -1.46
CAPN3-210ENST00000561817 TTKP33981 857 aa5.96□□□□□ -1.46
CAPN3-210ENST00000561817 PCYT1AP49585 367 aa5.96□□□□□ -1.46
CAPN3-210ENST00000561817 NUDT6P53370 316 aa5.96□□□□□ -1.46
CAPN3-210ENST00000561817 LIMK1P53667 647 aa5.96□□□□□ -1.46
CAPN3-210ENST00000561817 PNLIPRP2P54317 469 aa5.96□□□□□ -1.46
CAPN3-210ENST00000561817 DLX5P56178 289 aa5.96□□□□□ -1.46
CAPN3-210ENST00000561817 CLDN6P56747 220 aa5.96□□□□□ -1.46
CAPN3-210ENST00000561817 SLC26A5P58743 744 aa5.96□□□□□ -1.46
CAPN3-210ENST00000561817 CDC42P60953 191 aa5.96□□□□□ -1.46
CAPN3-210ENST00000561817 PSPHP78330 225 aa5.96□□□□□ -1.46
CAPN3-210ENST00000561817 TUBA3CQ13748 450 aa5.96□□□□□ -1.46
CAPN3-210ENST00000561817 PCOLCEQ15113 449 aa5.96□□□□□ -1.46
CAPN3-210ENST00000561817 NEDD8Q15843 81 aa5.96□□□□□ -1.46
CAPN3-210ENST00000561817 SYT14P1Q58G82 188 aa5.96□□□□□ -1.46
CAPN3-210ENST00000561817 SYT6Q5T7P8 510 aaPredicted RBP5.96□□□□□ -1.46
CAPN3-210ENST00000561817 FAM69BQ5VUD6 431 aa5.96□□□□□ -1.46
CAPN3-210ENST00000561817 UBE2UQ5VVX9 321 aa5.96□□□□□ -1.46
CAPN3-210ENST00000561817 FAM199XQ6PEV8 388 aaPredicted RBP5.96□□□□□ -1.46
CAPN3-210ENST00000561817 PAPD4Q6PIY7 484 aaKnown RBP5.96□□□□□ -1.46
CAPN3-210ENST00000561817 CBLN3Q6UW01 205 aa5.96□□□□□ -1.46
CAPN3-210ENST00000561817 C16orf47Q6ZP98 133 aaPredicted RBP5.96□□□□□ -1.46
CAPN3-210ENST00000561817 SLC16A12Q6ZSM3 486 aa5.96□□□□□ -1.46
CAPN3-210ENST00000561817 PTCHD4Q6ZW05 846 aa5.96□□□□□ -1.46
CAPN3-210ENST00000561817 SLC29A4Q7RTT9 530 aa5.96□□□□□ -1.46
CAPN3-210ENST00000561817 SLC46A3Q7Z3Q1 461 aa5.96□□□□□ -1.46
CAPN3-210ENST00000561817 BCDIN3DQ7Z5W3 292 aaKnown RBP5.96□□□□□ -1.46
CAPN3-210ENST00000561817 GPR141Q7Z602 305 aa5.96□□□□□ -1.46
CAPN3-210ENST00000561817 PIP4P1Q86T03 277 aa5.96□□□□□ -1.46
CAPN3-210ENST00000561817 ATG4DQ86TL0 474 aaPredicted RBP5.96□□□□□ -1.46
CAPN3-210ENST00000561817 ZNF614Q8N883 585 aa5.96□□□□□ -1.46
CAPN3-210ENST00000561817 TCEANCQ8N8B7 351 aa5.96□□□□□ -1.46
CAPN3-210ENST00000561817 ZNF540Q8NDQ6 660 aa5.96□□□□□ -1.46
CAPN3-210ENST00000561817 OR8J1Q8NGP2 316 aa5.96□□□□□ -1.46
CAPN3-210ENST00000561817 ELP5Q8TE02 316 aa5.96□□□□□ -1.46
CAPN3-210ENST00000561817 WFDC12Q8WWY7 111 aa5.96□□□□□ -1.46
CAPN3-210ENST00000561817 HGDQ93099 445 aa5.96□□□□□ -1.46
CAPN3-210ENST00000561817 YIPF6Q96EC8 236 aa5.96□□□□□ -1.46
CAPN3-210ENST00000561817 LIN37Q96GY3 246 aaPredicted RBP5.96□□□□□ -1.46
CAPN3-210ENST00000561817 IMMP1LQ96LU5 166 aa5.96□□□□□ -1.46
CAPN3-210ENST00000561817 HS6ST2Q96MM7 605 aa5.96□□□□□ -1.46
CAPN3-210ENST00000561817 GAL3ST4Q96RP7 486 aa5.96□□□□□ -1.46
CAPN3-210ENST00000561817 ADOQ96SZ5 270 aa5.96□□□□□ -1.46
CAPN3-210ENST00000561817 SLC7A5P2Q9GIP4 190 aa5.96□□□□□ -1.46
CAPN3-210ENST00000561817 NAA50Q9GZZ1 169 aaKnown RBP5.96□□□□□ -1.46
CAPN3-210ENST00000561817 ADAM19Q9H013 955 aa5.96□□□□□ -1.46
CAPN3-210ENST00000561817 AMBNQ9NP70 447 aa5.96□□□□□ -1.46
CAPN3-210ENST00000561817 CCNB1IP1Q9NPC3 277 aa5.96□□□□□ -1.46
CAPN3-210ENST00000561817 ACOT13Q9NPJ3 140 aa5.96□□□□□ -1.46
CAPN3-210ENST00000561817 MRPS18AQ9NVS2 196 aaKnown RBP5.96□□□□□ -1.46
CAPN3-210ENST00000561817 IMPAD1Q9NX62 359 aa5.96□□□□□ -1.46
CAPN3-210ENST00000561817 SLC39A1Q9NY26 324 aa5.96□□□□□ -1.46
CAPN3-210ENST00000561817 SCN3BQ9NY72 215 aa5.96□□□□□ -1.46
CAPN3-210ENST00000561817 GPR83Q9NYM4 423 aa5.96□□□□□ -1.46
CAPN3-210ENST00000561817 CNOT2Q9NZN8 540 aaKnown RBP5.96□□□□□ -1.46
CAPN3-210ENST00000561817 SELENONQ9NZV5 590 aa5.96□□□□□ -1.46
CAPN3-210ENST00000561817 COPS7AQ9UBW8 275 aa5.96□□□□□ -1.46
CAPN3-210ENST00000561817 NXT1Q9UKK6 140 aaKnown RBP5.96□□□□□ -1.46
CAPN3-210ENST00000561817 SIGLEC7Q9Y286 467 aa5.96□□□□□ -1.46
CAPN3-210ENST00000561817 B3GALT1Q9Y5Z6 326 aa5.96□□□□□ -1.46
CAPN3-210ENST00000561817 PCNX2A6NKB5 2137 aa5.96□□□□□ -1.46
CAPN3-210ENST00000561817 ZNF292O60281 2723 aa5.96□□□□□ -1.46
CAPN3-210ENST00000561817 TRAV20A0A0B4J274 112 aa5.95□□□□□ -1.46
CAPN3-210ENST00000561817 TEX51A0A1B0GUA7 166 aa5.95□□□□□ -1.46
CAPN3-210ENST00000561817 EFCAB10A6NFE3 127 aa5.95□□□□□ -1.46
CAPN3-210ENST00000561817 ZNF99A8MXY4 864 aaPredicted RBP5.95□□□□□ -1.46
CAPN3-210ENST00000561817 H3BN98 237 aa5.95□□□□□ -1.46
CAPN3-210ENST00000561817 BHLHE40O14503 412 aa5.95□□□□□ -1.46
CAPN3-210ENST00000561817 SURF4O15260 269 aa5.95□□□□□ -1.46
CAPN3-210ENST00000561817 ZNF264O43296 627 aa5.95□□□□□ -1.46
CAPN3-210ENST00000561817 EIF4E2O60573 245 aaKnown RBP5.95□□□□□ -1.46
CAPN3-210ENST00000561817 REM1O75628 298 aa5.95□□□□□ -1.46
CAPN3-210ENST00000561817 PPM1BO75688 479 aa5.95□□□□□ -1.46
CAPN3-210ENST00000561817 STSP08842 583 aa5.95□□□□□ -1.46
CAPN3-210ENST00000561817 TSPAN19P0C672 248 aa5.95□□□□□ -1.46
CAPN3-210ENST00000561817 FTH1P19P0C7X4 201 aa5.95□□□□□ -1.46
CAPN3-210ENST00000561817 UBL4AP11441 157 aa5.95□□□□□ -1.46
CAPN3-210ENST00000561817 COX6A1P12074 109 aa5.95□□□□□ -1.46
CAPN3-210ENST00000561817 IFI30P13284 250 aa5.95□□□□□ -1.46
CAPN3-210ENST00000561817 NAGAP17050 411 aa5.95□□□□□ -1.46
CAPN3-210ENST00000561817 PTNP21246 168 aa5.95□□□□□ -1.46
CAPN3-210ENST00000561817 SDHBP21912 280 aa5.95□□□□□ -1.46
CAPN3-210ENST00000561817 PCSK6P29122 969 aa5.95□□□□□ -1.46
CAPN3-210ENST00000561817 C21orf33P30042 268 aaPredicted RBP5.95□□□□□ -1.46
CAPN3-210ENST00000561817 TGFBR2P37173 567 aa5.95□□□□□ -1.46
CAPN3-210ENST00000561817 SMSP52788 366 aa5.95□□□□□ -1.46
CAPN3-210ENST00000561817 E2F1Q01094 437 aa5.95□□□□□ -1.46
CAPN3-210ENST00000561817 ZNF117Q03924 483 aa5.95□□□□□ -1.46
CAPN3-210ENST00000561817 EGR4Q05215 589 aa5.95□□□□□ -1.46
CAPN3-210ENST00000561817 PLCXD2Q0VAA5 305 aa5.95□□□□□ -1.46
CAPN3-210ENST00000561817 NCF4Q15080 339 aa5.95□□□□□ -1.46
CAPN3-210ENST00000561817 TRIP6Q15654 476 aaKnown RBP5.95□□□□□ -1.46
CAPN3-210ENST00000561817 TBCEQ15813 527 aaPredicted RBP5.95□□□□□ -1.46
CAPN3-210ENST00000561817 ISXQ2M1V0 245 aa5.95□□□□□ -1.46
CAPN3-210ENST00000561817 PGGHGQ32M88 737 aa5.95□□□□□ -1.46
CAPN3-210ENST00000561817 ALG10BQ5I7T1 473 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms