RNA–Protein interactions for RNA: ENST00000561354.1

CARMIL3-204, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 4

Gene CARMIL3, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-204ENST00000561354 USF1P22415 310 aaPredicted RBP10.39□□□□□ -0.75
CARMIL3-204ENST00000561354 NTF4P34130 210 aa10.39□□□□□ -0.75
CARMIL3-204ENST00000561354 CLK1P49759 484 aaKnown RBP10.39□□□□□ -0.75
CARMIL3-204ENST00000561354 EFNA4P52798 201 aa10.39□□□□□ -0.75
CARMIL3-204ENST00000561354 CHRNEQ04844 493 aa10.39□□□□□ -0.75
CARMIL3-204ENST00000561354 CHRNB3Q05901 458 aa10.39□□□□□ -0.75
CARMIL3-204ENST00000561354 GABRA6Q16445 453 aa10.39□□□□□ -0.75
CARMIL3-204ENST00000561354 ARHGAP11BQ3KRB8 267 aa10.39□□□□□ -0.75
CARMIL3-204ENST00000561354 KRTAP24-1Q3LI83 254 aa10.39□□□□□ -0.75
CARMIL3-204ENST00000561354 C6orf136Q5SQH8 315 aa10.39□□□□□ -0.75
CARMIL3-204ENST00000561354 IL23RQ5VWK5 629 aa10.39□□□□□ -0.75
CARMIL3-204ENST00000561354 AP1ARQ63HQ0 302 aa10.39□□□□□ -0.75
CARMIL3-204ENST00000561354 EIF3MQ7L2H7 374 aaKnown RBP10.39□□□□□ -0.75
CARMIL3-204ENST00000561354 PIGWQ7Z7B1 504 aa10.39□□□□□ -0.75
CARMIL3-204ENST00000561354 C4orf33Q8N1A6 199 aa10.39□□□□□ -0.75
CARMIL3-204ENST00000561354 KRTCAP2Q8N6L1 136 aa10.39□□□□□ -0.75
CARMIL3-204ENST00000561354 FAM71CQ8NEG0 241 aa10.39□□□□□ -0.75
CARMIL3-204ENST00000561354 OR5AK3PQ8NH89 298 aa10.39□□□□□ -0.75
CARMIL3-204ENST00000561354 PIGXQ8TBF5 258 aa10.39□□□□□ -0.75
CARMIL3-204ENST00000561354 LRRC8CQ8TDW0 803 aa10.39□□□□□ -0.75
CARMIL3-204ENST00000561354 DUSP26Q9BV47 211 aa10.39□□□□□ -0.75
CARMIL3-204ENST00000561354 CCDC106Q9BWC9 280 aa10.39□□□□□ -0.75
CARMIL3-204ENST00000561354 AMBRA1Q9C0C7 1298 aa10.39□□□□□ -0.75
CARMIL3-204ENST00000561354 ZNF350Q9GZX5 532 aa10.39□□□□□ -0.75
CARMIL3-204ENST00000561354 SHARPINQ9H0F6 387 aa10.39□□□□□ -0.75
CARMIL3-204ENST00000561354 SERHL2Q9H4I8 314 aa10.39□□□□□ -0.75
CARMIL3-204ENST00000561354 MANSC1Q9H8J5 431 aa10.39□□□□□ -0.75
CARMIL3-204ENST00000561354 GIMAP2Q9UG22 337 aa10.39□□□□□ -0.75
CARMIL3-204ENST00000561354 CHRNA9Q9UGM1 479 aa10.39□□□□□ -0.75
CARMIL3-204ENST00000561354 HDGFL3Q9Y3E1 203 aa10.39□□□□□ -0.75
CARMIL3-204ENST00000561354 CENPVL1A0A0U1RR11 272 aa10.38□□□□□ -0.75
CARMIL3-204ENST00000561354 A0A1W2PR80 420 aa10.38□□□□□ -0.75
CARMIL3-204ENST00000561354 M0R1B8 84 aa10.38□□□□□ -0.75
CARMIL3-204ENST00000561354 LMX1BO60663 402 aa10.38□□□□□ -0.75
CARMIL3-204ENST00000561354 ITGA5P08648 1049 aa10.38□□□□□ -0.75
CARMIL3-204ENST00000561354 IGHV4-31P0DP07 118 aa10.38□□□□□ -0.75
CARMIL3-204ENST00000561354 TFPIP10646 304 aa10.38□□□□□ -0.75
CARMIL3-204ENST00000561354 ALDH3A1P30838 453 aa10.38□□□□□ -0.75
CARMIL3-204ENST00000561354 APOBEC3AP31941 199 aaPredicted RBP10.38□□□□□ -0.75
CARMIL3-204ENST00000561354 PGM1P36871 562 aa10.38□□□□□ -0.75
CARMIL3-204ENST00000561354 WDR4P57081 412 aaKnown RBP10.38□□□□□ -0.75
CARMIL3-204ENST00000561354 RPS26P62854 115 aaKnown RBP10.38□□□□□ -0.75
CARMIL3-204ENST00000561354 LSM11P83369 360 aaKnown RBP eCLIP10.38□□□□□ -0.75
CARMIL3-204ENST00000561354 H3F3AP84243 136 aa10.38□□□□□ -0.75
CARMIL3-204ENST00000561354 MPP2Q14168 576 aa10.38□□□□□ -0.75
CARMIL3-204ENST00000561354 GRINAQ7Z429 371 aa10.38□□□□□ -0.75
CARMIL3-204ENST00000561354 C6orf120Q7Z4R8 191 aa10.38□□□□□ -0.75
CARMIL3-204ENST00000561354 LRRC34Q8IZ02 419 aa10.38□□□□□ -0.75
CARMIL3-204ENST00000561354 C17orf78Q8N4C9 275 aa10.38□□□□□ -0.75
CARMIL3-204ENST00000561354 WDR31Q8NA23 367 aa10.38□□□□□ -0.75
CARMIL3-204ENST00000561354 C1orf162Q8NEQ5 155 aaPredicted RBP10.38□□□□□ -0.75
CARMIL3-204ENST00000561354 HTRA1Q92743 480 aa10.38□□□□□ -0.75
CARMIL3-204ENST00000561354 ARL5BQ96KC2 179 aa10.38□□□□□ -0.75
CARMIL3-204ENST00000561354 C3orf30Q96M34 536 aa10.38□□□□□ -0.75
CARMIL3-204ENST00000561354 C1orf50Q9BV19 199 aa10.38□□□□□ -0.75
CARMIL3-204ENST00000561354 FKRPQ9H9S5 495 aa10.38□□□□□ -0.75
CARMIL3-204ENST00000561354 CTPS2Q9NRF8 586 aa10.38□□□□□ -0.75
CARMIL3-204ENST00000561354 EXD2Q9NVH0 621 aa10.38□□□□□ -0.75
CARMIL3-204ENST00000561354 MKLN1Q9UL63 735 aa10.38□□□□□ -0.75
CARMIL3-204ENST00000561354 TRAPPC4Q9Y296 219 aa10.38□□□□□ -0.75
CARMIL3-204ENST00000561354 SLC35A3Q9Y2D2 325 aa10.38□□□□□ -0.75
CARMIL3-204ENST00000561354 PMF1-BGLAPU3KQ54 211 aa10.38□□□□□ -0.75
CARMIL3-204ENST00000561354 CUBNO60494 3623 aa10.38□□□□□ -0.75
CARMIL3-204ENST00000561354 SNX3O60493 162 aa10.37□□□□□ -0.75
CARMIL3-204ENST00000561354 SPAG7O75391 227 aa10.37□□□□□ -0.75
CARMIL3-204ENST00000561354 AGR2O95994 175 aa10.37□□□□□ -0.75
CARMIL3-204ENST00000561354 ZNF16P17020 682 aaPredicted RBP10.37□□□□□ -0.75
CARMIL3-204ENST00000561354 SOAT1P35610 550 aa10.37□□□□□ -0.75
CARMIL3-204ENST00000561354 MAGEA8P43361 318 aa10.37□□□□□ -0.75
CARMIL3-204ENST00000561354 GZMKP49863 264 aa10.37□□□□□ -0.75
CARMIL3-204ENST00000561354 FOXG1P55316 489 aaPredicted RBP10.37□□□□□ -0.75
CARMIL3-204ENST00000561354 CLDN8P56748 225 aa10.37□□□□□ -0.75
CARMIL3-204ENST00000561354 MAPK14Q16539 360 aa10.37□□□□□ -0.75
CARMIL3-204ENST00000561354 C6orf89Q6UWU4 347 aa10.37□□□□□ -0.75
CARMIL3-204ENST00000561354 CCDC121Q6ZUS5 278 aa10.37□□□□□ -0.75
CARMIL3-204ENST00000561354 C16orf62Q7Z3J2 963 aa10.37□□□□□ -0.75
CARMIL3-204ENST00000561354 SPATA21Q7Z572 469 aa10.37□□□□□ -0.75
CARMIL3-204ENST00000561354 ADGRG3Q86Y34 549 aa10.37□□□□□ -0.75
CARMIL3-204ENST00000561354 FNDC5Q8NAU1 212 aa10.37□□□□□ -0.75
CARMIL3-204ENST00000561354 ZNF563Q8TA94 476 aa10.37□□□□□ -0.75
CARMIL3-204ENST00000561354 MIPOL1Q8TD10 442 aa10.37□□□□□ -0.75
CARMIL3-204ENST00000561354 SAP130Q9H0E3 1048 aa10.37□□□□□ -0.75
CARMIL3-204ENST00000561354 RABEP2Q9H5N1 569 aa10.37□□□□□ -0.75
CARMIL3-204ENST00000561354 EXOSC3Q9NQT5 275 aaKnown RBP10.37□□□□□ -0.75
CARMIL3-204ENST00000561354 POLE3Q9NRF9 147 aa10.37□□□□□ -0.75
CARMIL3-204ENST00000561354 PARPBPQ9NWS1 579 aa10.37□□□□□ -0.75
CARMIL3-204ENST00000561354 DCTN4Q9UJW0 460 aa10.37□□□□□ -0.75
CARMIL3-204ENST00000561354 AMDHD2Q9Y303 409 aa10.37□□□□□ -0.75
CARMIL3-204ENST00000561354 RRP15Q9Y3B9 282 aaKnown RBP10.37□□□□□ -0.75
CARMIL3-204ENST00000561354 ATP23Q9Y6H3 246 aa10.37□□□□□ -0.75
CARMIL3-204ENST00000561354 RNF103-CHMP3A0A140T963 221 aa10.36□□□□□ -0.75
CARMIL3-204ENST00000561354 VWC2LB2RUY7 222 aa10.36□□□□□ -0.75
CARMIL3-204ENST00000561354 NDUFS8O00217 210 aa10.36□□□□□ -0.75
CARMIL3-204ENST00000561354 RNASET2O00584 256 aaKnown RBP10.36□□□□□ -0.75
CARMIL3-204ENST00000561354 KLF11O14901 512 aa10.36□□□□□ -0.75
CARMIL3-204ENST00000561354 KIAA0513O60268 411 aa10.36□□□□□ -0.75
CARMIL3-204ENST00000561354 C8BP07358 591 aa10.36□□□□□ -0.75
CARMIL3-204ENST00000561354 G6PDP11413 515 aa10.36□□□□□ -0.75
CARMIL3-204ENST00000561354 SERPINB5P36952 375 aa10.36□□□□□ -0.75
CARMIL3-204ENST00000561354 PHC1P78364 1004 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms