RNA–Protein interactions for RNA: ENST00000560463.5

TRAF3-209, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-209ENST00000560463 CHRNA9Q9UGM1 479 aa7.81□□□□□ -1.16
TRAF3-209ENST00000560463 ZNF229Q9UJW7 825 aa7.81□□□□□ -1.16
TRAF3-209ENST00000560463 BOKQ9UMX3 212 aaPredicted RBP7.81□□□□□ -1.16
TRAF3-209ENST00000560463 BAIAP2Q9UQB8 552 aa7.81□□□□□ -1.16
TRAF3-209ENST00000560463 VDAC3Q9Y277 283 aa7.81□□□□□ -1.16
TRAF3-209ENST00000560463 SIGLEC7Q9Y286 467 aa7.81□□□□□ -1.16
TRAF3-209ENST00000560463 MYRFQ9Y2G1 1151 aa7.81□□□□□ -1.16
TRAF3-209ENST00000560463 ZNF337Q9Y3M9 751 aa7.81□□□□□ -1.16
TRAF3-209ENST00000560463 CDH10Q9Y6N8 788 aa7.81□□□□□ -1.16
TRAF3-209ENST00000560463 PHF3Q92576 2039 aaKnown RBP7.81□□□□□ -1.16
TRAF3-209ENST00000560463 ANKRD11Q6UB99 2663 aaPredicted RBP7.81□□□□□ -1.16
TRAF3-209ENST00000560463 MED12LQ86YW9 2145 aa7.81□□□□□ -1.16
TRAF3-209ENST00000560463 IGKV1D-42A0A075B6H8 117 aa7.8□□□□□ -1.16
TRAF3-209ENST00000560463 TRAV36DV7A0A075B6V5 113 aa7.8□□□□□ -1.16
TRAF3-209ENST00000560463 C17orf51A8MQB3 221 aa7.8□□□□□ -1.16
TRAF3-209ENST00000560463 B4DXG7 233 aa7.8□□□□□ -1.16
TRAF3-209ENST00000560463 KLRC4-KLRK1H3BQV0 150 aa7.8□□□□□ -1.16
TRAF3-209ENST00000560463 GNB5O14775 395 aa7.8□□□□□ -1.16
TRAF3-209ENST00000560463 EFSO43281 561 aa7.8□□□□□ -1.16
TRAF3-209ENST00000560463 TLX3O43711 291 aaPredicted RBP7.8□□□□□ -1.16
TRAF3-209ENST00000560463 GMFGO60234 142 aa7.8□□□□□ -1.16
TRAF3-209ENST00000560463 SUSD5O60279 629 aa7.8□□□□□ -1.16
TRAF3-209ENST00000560463 PTP4A3O75365 173 aa7.8□□□□□ -1.16
TRAF3-209ENST00000560463 CEACAM4O75871 244 aa7.8□□□□□ -1.16
TRAF3-209ENST00000560463 NEURL1O76050 574 aa7.8□□□□□ -1.16
TRAF3-209ENST00000560463 OR7A10O76100 309 aa7.8□□□□□ -1.16
TRAF3-209ENST00000560463 SOX14O95416 240 aa7.8□□□□□ -1.16
TRAF3-209ENST00000560463 LYNP07948 512 aa7.8□□□□□ -1.16
TRAF3-209ENST00000560463 CCDC159P0C7I6 412 aa7.8□□□□□ -1.16
TRAF3-209ENST00000560463 ZNF17P17021 662 aa7.8□□□□□ -1.16
TRAF3-209ENST00000560463 FUT1P19526 365 aa7.8□□□□□ -1.16
TRAF3-209ENST00000560463 WT1P19544 449 aaPredicted RBP7.8□□□□□ -1.16
TRAF3-209ENST00000560463 DPP4P27487 766 aa7.8□□□□□ -1.16
TRAF3-209ENST00000560463 ELK4P28324 431 aa7.8□□□□□ -1.16
TRAF3-209ENST00000560463 MYBPC1Q00872 1141 aa7.8□□□□□ -1.16
TRAF3-209ENST00000560463 IL5RAQ01344 420 aa7.8□□□□□ -1.16
TRAF3-209ENST00000560463 CD47Q08722 323 aa7.8□□□□□ -1.16
TRAF3-209ENST00000560463 SELENBP1Q13228 472 aa7.8□□□□□ -1.16
TRAF3-209ENST00000560463 SRSF6Q13247 344 aaKnown RBP7.8□□□□□ -1.16
TRAF3-209ENST00000560463 GINS1Q14691 196 aa7.8□□□□□ -1.16
TRAF3-209ENST00000560463 MFSD13AQ14CX5 517 aa7.8□□□□□ -1.16
TRAF3-209ENST00000560463 MAD2L1BPQ15013 274 aaPredicted RBP7.8□□□□□ -1.16
TRAF3-209ENST00000560463 OR1C1Q15619 314 aa7.8□□□□□ -1.16
TRAF3-209ENST00000560463 C6orf141Q5SZD1 244 aa7.8□□□□□ -1.16
TRAF3-209ENST00000560463 FAM69AQ5T7M9 428 aa7.8□□□□□ -1.16
TRAF3-209ENST00000560463 C12orf73Q69YU5 71 aa7.8□□□□□ -1.16
TRAF3-209ENST00000560463 C3orf33Q6P1S2 294 aa7.8□□□□□ -1.16
TRAF3-209ENST00000560463 SMARCD3Q6STE5 483 aa7.8□□□□□ -1.16
TRAF3-209ENST00000560463 IGFL2Q6UWQ7 119 aa7.8□□□□□ -1.16
TRAF3-209ENST00000560463 ARSKQ6UWY0 536 aa7.8□□□□□ -1.16
TRAF3-209ENST00000560463 LINC00696Q6ZRV3 163 aa7.8□□□□□ -1.16
TRAF3-209ENST00000560463 KIF18BQ86Y91 864 aa7.8□□□□□ -1.16
TRAF3-209ENST00000560463 ENTHD1Q8IYW4 607 aa7.8□□□□□ -1.16
TRAF3-209ENST00000560463 GTPBP8Q8N3Z3 284 aaPredicted RBP7.8□□□□□ -1.16
TRAF3-209ENST00000560463 OR2T33Q8NG76 320 aa7.8□□□□□ -1.16
TRAF3-209ENST00000560463 OR8J1Q8NGP2 316 aa7.8□□□□□ -1.16
TRAF3-209ENST00000560463 RHOXF1Q8NHV9 184 aa7.8□□□□□ -1.16
TRAF3-209ENST00000560463 FAM81AQ8TBF8 368 aa7.8□□□□□ -1.16
TRAF3-209ENST00000560463 ZNF566Q969W8 418 aa7.8□□□□□ -1.16
TRAF3-209ENST00000560463 ZNF524Q96C55 264 aa7.8□□□□□ -1.16
TRAF3-209ENST00000560463 Q96MT0 163 aa7.8□□□□□ -1.16
TRAF3-209ENST00000560463 SIGLEC12Q96PQ1 595 aa7.8□□□□□ -1.16
TRAF3-209ENST00000560463 SLC38A2Q96QD8 506 aa7.8□□□□□ -1.16
TRAF3-209ENST00000560463 KLHDC3Q9BQ90 382 aa7.8□□□□□ -1.16
TRAF3-209ENST00000560463 POLDIP3Q9BY77 421 aaKnown RBP7.8□□□□□ -1.16
TRAF3-209ENST00000560463 POTEKPQ9BYX7 375 aa7.8□□□□□ -1.16
TRAF3-209ENST00000560463 OR52D1Q9H346 318 aa7.8□□□□□ -1.16
TRAF3-209ENST00000560463 EGLN3Q9H6Z9 239 aa7.8□□□□□ -1.16
TRAF3-209ENST00000560463 FKRPQ9H9S5 495 aa7.8□□□□□ -1.16
TRAF3-209ENST00000560463 ZFP64Q9NPA5 681 aa7.8□□□□□ -1.16
TRAF3-209ENST00000560463 NANSQ9NR45 359 aa7.8□□□□□ -1.16
TRAF3-209ENST00000560463 ANKRD10Q9NXR5 420 aa7.8□□□□□ -1.16
TRAF3-209ENST00000560463 FBXL2Q9UKC9 423 aa7.8□□□□□ -1.16
TRAF3-209ENST00000560463 BLOC1S6Q9UL45 172 aa7.8□□□□□ -1.16
TRAF3-209ENST00000560463 KLF13Q9Y2Y9 288 aaPredicted RBP7.8□□□□□ -1.16
TRAF3-209ENST00000560463 KCNMB2Q9Y691 235 aa7.8□□□□□ -1.16
TRAF3-209ENST00000560463 CELSR3Q9NYQ7 3312 aa7.8□□□□□ -1.16
TRAF3-209ENST00000560463 PTPRQQ9UMZ3 2332 aa7.8□□□□□ -1.16
TRAF3-209ENST00000560463 TMEM72A0PK05 275 aa7.79□□□□□ -1.16
TRAF3-209ENST00000560463 SH3D21A4FU49 640 aa7.79□□□□□ -1.16
TRAF3-209ENST00000560463 A6NL46 340 aa7.79□□□□□ -1.16
TRAF3-209ENST00000560463 LINC01387J3KSC0 135 aa7.79□□□□□ -1.16
TRAF3-209ENST00000560463 NDUFB2O95178 105 aa7.79□□□□□ -1.16
TRAF3-209ENST00000560463 CH25HO95992 272 aa7.79□□□□□ -1.16
TRAF3-209ENST00000560463 BGLAPP02818 100 aa7.79□□□□□ -1.16
TRAF3-209ENST00000560463 HIST1H2ABP04908 130 aa7.79□□□□□ -1.16
TRAF3-209ENST00000560463 HMGN1P05114 100 aa7.79□□□□□ -1.16
TRAF3-209ENST00000560463 SP1P08047 785 aa7.79□□□□□ -1.16
TRAF3-209ENST00000560463 TSPAN19P0C672 248 aa7.79□□□□□ -1.16
TRAF3-209ENST00000560463 ASAH2BP0C7U1 165 aa7.79□□□□□ -1.16
TRAF3-209ENST00000560463 CD46P15529 392 aa7.79□□□□□ -1.16
TRAF3-209ENST00000560463 HK1P19367 917 aa7.79□□□□□ -1.16
TRAF3-209ENST00000560463 SPINK2P20155 84 aa7.79□□□□□ -1.16
TRAF3-209ENST00000560463 SRD5A2P31213 254 aa7.79□□□□□ -1.16
TRAF3-209ENST00000560463 SLC6A6P31641 620 aa7.79□□□□□ -1.16
TRAF3-209ENST00000560463 ID4P47928 161 aa7.79□□□□□ -1.16
TRAF3-209ENST00000560463 DNASE1L1P49184 302 aa7.79□□□□□ -1.16
TRAF3-209ENST00000560463 ST13P50502 369 aaKnown RBP7.79□□□□□ -1.16
TRAF3-209ENST00000560463 CCL11P51671 97 aa7.79□□□□□ -1.16
TRAF3-209ENST00000560463 SNRPGP62308 76 aaKnown RBP7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms