RNA–Protein interactions for RNA: ENST00000560098.5

CRTC3-208, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 1 (best) BASIC

Gene CRTC3, Length 1,421 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-208ENST00000560098 HPCAP84074 193 aa15.29■□□□□ 0.04
CRTC3-208ENST00000560098 H3F3AP84243 136 aa15.29■□□□□ 0.04
CRTC3-208ENST00000560098 HMGN2P46Q86SG4 172 aa15.29■□□□□ 0.04
CRTC3-208ENST00000560098 TMEM181Q9P2C4 612 aa15.29■□□□□ 0.04
CRTC3-208ENST00000560098 MARCOQ9UEW3 520 aaPredicted RBP15.29■□□□□ 0.04
CRTC3-208ENST00000560098 RTTNQ86VV8 2226 aa15.29■□□□□ 0.04
CRTC3-208ENST00000560098 STAB1Q9NY15 2570 aa15.29■□□□□ 0.04
CRTC3-208ENST00000560098 PRAMEF27A3QJZ7 478 aa15.28■□□□□ 0.04
CRTC3-208ENST00000560098 WDR91A4D1P6 747 aa15.28■□□□□ 0.04
CRTC3-208ENST00000560098 RNF212BA8MTL3 300 aa15.28■□□□□ 0.04
CRTC3-208ENST00000560098 ITGA5P08648 1049 aa15.28■□□□□ 0.04
CRTC3-208ENST00000560098 CHI3L1P36222 383 aaPredicted RBP15.28■□□□□ 0.04
CRTC3-208ENST00000560098 FABP6P51161 128 aa15.28■□□□□ 0.04
CRTC3-208ENST00000560098 FOXG1P55316 489 aaPredicted RBP15.28■□□□□ 0.04
CRTC3-208ENST00000560098 ABCE1P61221 599 aaKnown RBP15.28■□□□□ 0.04
CRTC3-208ENST00000560098 VSNL1P62760 191 aa15.28■□□□□ 0.04
CRTC3-208ENST00000560098 CASP8Q14790 479 aa15.28■□□□□ 0.04
CRTC3-208ENST00000560098 RAB35Q15286 201 aa15.28■□□□□ 0.04
CRTC3-208ENST00000560098 CHI3L2Q15782 390 aa15.28■□□□□ 0.04
CRTC3-208ENST00000560098 CHRFAM7AQ494W8 412 aa15.28■□□□□ 0.04
CRTC3-208ENST00000560098 SPANXN4Q5MJ08 99 aa15.28■□□□□ 0.04
CRTC3-208ENST00000560098 CASP12Q6UXS9 341 aa15.28■□□□□ 0.04
CRTC3-208ENST00000560098 B3GLCTQ6Y288 498 aa15.28■□□□□ 0.04
CRTC3-208ENST00000560098 OR52E4Q8NGH9 312 aa15.28■□□□□ 0.04
CRTC3-208ENST00000560098 CNOT9Q92600 299 aaKnown RBP15.28■□□□□ 0.04
CRTC3-208ENST00000560098 SLC35A5Q9BS91 424 aa15.28■□□□□ 0.04
CRTC3-208ENST00000560098 INPP5KQ9BT40 448 aa15.28■□□□□ 0.04
CRTC3-208ENST00000560098 RAP2CQ9Y3L5 183 aa15.28■□□□□ 0.04
CRTC3-208ENST00000560098 TMED7-TICAM2A0A0A6YYA0 188 aa15.27■□□□□ 0.04
CRTC3-208ENST00000560098 PDLIM1O00151 329 aa15.27■□□□□ 0.04
CRTC3-208ENST00000560098 HMGN4O00479 90 aa15.27■□□□□ 0.04
CRTC3-208ENST00000560098 AP3D1O14617 1153 aa15.27■□□□□ 0.04
CRTC3-208ENST00000560098 EIF1BO60739 113 aaKnown RBP15.27■□□□□ 0.04
CRTC3-208ENST00000560098 DPY19L1Q2PZI1 675 aa15.27■□□□□ 0.04
CRTC3-208ENST00000560098 TMEM249Q2WGJ8 235 aa15.27■□□□□ 0.04
CRTC3-208ENST00000560098 C6orf52Q5T4I8 152 aa15.27■□□□□ 0.04
CRTC3-208ENST00000560098 ZNF544Q6NX49 715 aa15.27■□□□□ 0.04
CRTC3-208ENST00000560098 CMIPQ8IY22 773 aa15.27■□□□□ 0.04
CRTC3-208ENST00000560098 HTRA1Q92743 480 aa15.27■□□□□ 0.04
CRTC3-208ENST00000560098 DDIT4LQ96D03 193 aa15.27■□□□□ 0.04
CRTC3-208ENST00000560098 TNFRSF13CQ96RJ3 184 aa15.27■□□□□ 0.04
CRTC3-208ENST00000560098 C1QTNF6Q9BXI9 259 aa15.27■□□□□ 0.04
CRTC3-208ENST00000560098 PARPBPQ9NWS1 579 aa15.27■□□□□ 0.04
CRTC3-208ENST00000560098 UPB1Q9UBR1 384 aa15.27■□□□□ 0.04
CRTC3-208ENST00000560098 SLC9A8Q9Y2E8 581 aa15.27■□□□□ 0.04
CRTC3-208ENST00000560098 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.27■□□□□ 0.04
CRTC3-208ENST00000560098 TMED7Q9Y3B3 224 aa15.27■□□□□ 0.04
CRTC3-208ENST00000560098 ELOA3DA6NLF2 546 aaPredicted RBP15.26■□□□□ 0.03
CRTC3-208ENST00000560098 H7C417 338 aa15.26■□□□□ 0.03
CRTC3-208ENST00000560098 ZNF208O43345 1280 aa15.26■□□□□ 0.03
CRTC3-208ENST00000560098 IMPDH2P12268 514 aa15.26■□□□□ 0.03
CRTC3-208ENST00000560098 RPL14P50914 215 aaKnown RBP15.26■□□□□ 0.03
CRTC3-208ENST00000560098 POLR2HP52434 150 aaKnown RBP15.26■□□□□ 0.03
CRTC3-208ENST00000560098 CLNS1AP54105 237 aaKnown RBP15.26■□□□□ 0.03
CRTC3-208ENST00000560098 SLC35A1P78382 337 aa15.26■□□□□ 0.03
CRTC3-208ENST00000560098 LOXL1Q08397 574 aaPredicted RBP15.26■□□□□ 0.03
CRTC3-208ENST00000560098 ELOA3BQ3SY89 546 aa15.26■□□□□ 0.03
CRTC3-208ENST00000560098 FAM174BQ3ZCQ3 159 aa15.26■□□□□ 0.03
CRTC3-208ENST00000560098 C9orf135Q5VTT2 229 aa15.26■□□□□ 0.03
CRTC3-208ENST00000560098 LRRC34Q8IZ02 419 aa15.26■□□□□ 0.03
CRTC3-208ENST00000560098 C17orf78Q8N4C9 275 aa15.26■□□□□ 0.03
CRTC3-208ENST00000560098 ZNF525Q8N782 197 aa15.26■□□□□ 0.03
CRTC3-208ENST00000560098 WDR31Q8NA23 367 aa15.26■□□□□ 0.03
CRTC3-208ENST00000560098 C1orf162Q8NEQ5 155 aaPredicted RBP15.26■□□□□ 0.03
CRTC3-208ENST00000560098 ELOA3Q8NG57 546 aa15.26■□□□□ 0.03
CRTC3-208ENST00000560098 PMM1Q92871 262 aa15.26■□□□□ 0.03
CRTC3-208ENST00000560098 TRNT1Q96Q11 434 aaKnown RBP15.26■□□□□ 0.03
CRTC3-208ENST00000560098 NAA11Q9BSU3 229 aaPredicted RBP15.26■□□□□ 0.03
CRTC3-208ENST00000560098 AMBRA1Q9C0C7 1298 aa15.26■□□□□ 0.03
CRTC3-208ENST00000560098 C20orf27Q9GZN8 174 aa15.26■□□□□ 0.03
CRTC3-208ENST00000560098 SLC7A10Q9NS82 523 aa15.26■□□□□ 0.03
CRTC3-208ENST00000560098 DCTN4Q9UJW0 460 aa15.26■□□□□ 0.03
CRTC3-208ENST00000560098 OSGIN1Q9UJX0 560 aa15.26■□□□□ 0.03
CRTC3-208ENST00000560098 FLVCR1Q9Y5Y0 555 aa15.26■□□□□ 0.03
CRTC3-208ENST00000560098 TMEM72A0PK05 275 aa15.26■□□□□ 0.03
CRTC3-208ENST00000560098 AGAP5A6NIR3 686 aa15.26■□□□□ 0.03
CRTC3-208ENST00000560098 E9PBE3 544 aa15.26■□□□□ 0.03
CRTC3-208ENST00000560098 BIRC5O15392 142 aa15.26■□□□□ 0.03
CRTC3-208ENST00000560098 SNUPNO95149 360 aaKnown RBP15.26■□□□□ 0.03
CRTC3-208ENST00000560098 C1QCP02747 245 aa15.26■□□□□ 0.03
CRTC3-208ENST00000560098 BMP4P12644 408 aa15.26■□□□□ 0.03
CRTC3-208ENST00000560098 SLC25A16P16260 332 aa15.26■□□□□ 0.03
CRTC3-208ENST00000560098 LBPP18428 481 aa15.26■□□□□ 0.03
CRTC3-208ENST00000560098 TACR3P29371 465 aa15.26■□□□□ 0.03
CRTC3-208ENST00000560098 S100A3P33764 101 aa15.26■□□□□ 0.03
CRTC3-208ENST00000560098 MAP2K6P52564 334 aa15.26■□□□□ 0.03
CRTC3-208ENST00000560098 VLDLRP98155 873 aa15.26■□□□□ 0.03
CRTC3-208ENST00000560098 TGFBR3Q03167 851 aa15.26■□□□□ 0.03
CRTC3-208ENST00000560098 SLC17A1Q14916 467 aa15.26■□□□□ 0.03
CRTC3-208ENST00000560098 SYPL1Q16563 259 aa15.26■□□□□ 0.03
CRTC3-208ENST00000560098 RNF130Q86XS8 419 aa15.26■□□□□ 0.03
CRTC3-208ENST00000560098 ANKFN1Q8N957 763 aa15.26■□□□□ 0.03
CRTC3-208ENST00000560098 AENQ8WTP8 325 aaKnown RBP15.26■□□□□ 0.03
CRTC3-208ENST00000560098 CCDC115Q96NT0 180 aa15.26■□□□□ 0.03
CRTC3-208ENST00000560098 TMEM109Q9BVC6 243 aa15.26■□□□□ 0.03
CRTC3-208ENST00000560098 SLC38A1Q9H2H9 487 aa15.26■□□□□ 0.03
CRTC3-208ENST00000560098 FKRPQ9H9S5 495 aa15.26■□□□□ 0.03
CRTC3-208ENST00000560098 SLC17A5Q9NRA2 495 aa15.26■□□□□ 0.03
CRTC3-208ENST00000560098 BTNL2Q9UIR0 455 aa15.26■□□□□ 0.03
CRTC3-208ENST00000560098 AMDHD2Q9Y303 409 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms