RNA–Protein interactions for RNA: ENST00000560089.5

SEMA4B-215, Transcript of semaphorin 4B, humanhuman

TSL 1 (best)

Gene SEMA4B, Length 2,804 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-215ENST00000560089 NKAPLQ5M9Q1 402 aa17.72■□□□□ 0.43
SEMA4B-215ENST00000560089 C1orf53Q5VUE5 145 aa17.72■□□□□ 0.43
SEMA4B-215ENST00000560089 NLRC5Q86WI3 1866 aa17.72■□□□□ 0.43
SEMA4B-215ENST00000560089 MUC20Q8N307 709 aaPredicted RBP17.72■□□□□ 0.43
SEMA4B-215ENST00000560089 GPBAR1Q8TDU6 330 aa17.72■□□□□ 0.43
SEMA4B-215ENST00000560089 UBTD2Q8WUN7 234 aa17.72■□□□□ 0.43
SEMA4B-215ENST00000560089 ZNF649Q9BS31 505 aa17.72■□□□□ 0.43
SEMA4B-215ENST00000560089 ADGRE3Q9BY15 652 aa17.72■□□□□ 0.43
SEMA4B-215ENST00000560089 TMEM38AQ9H6F2 299 aa17.72■□□□□ 0.43
SEMA4B-215ENST00000560089 CWH43Q9H720 699 aa17.72■□□□□ 0.43
SEMA4B-215ENST00000560089 MVB12BQ9H7P6 319 aa17.72■□□□□ 0.43
SEMA4B-215ENST00000560089 ABRACLQ9P1F3 81 aa17.72■□□□□ 0.43
SEMA4B-215ENST00000560089 MARCH11A6NNE9 402 aa17.72■□□□□ 0.43
SEMA4B-215ENST00000560089 EPORP19235 508 aa17.72■□□□□ 0.43
SEMA4B-215ENST00000560089 AHRP35869 848 aa17.72■□□□□ 0.43
SEMA4B-215ENST00000560089 OLFML2AQ68BL7 652 aa17.72■□□□□ 0.43
SEMA4B-215ENST00000560089 TCTN3Q6NUS6 607 aa17.72■□□□□ 0.43
SEMA4B-215ENST00000560089 TEX26Q8N6G2 289 aa17.72■□□□□ 0.43
SEMA4B-215ENST00000560089 TRMT61BQ9BVS5 477 aaKnown RBP17.72■□□□□ 0.43
SEMA4B-215ENST00000560089 SMG9Q9H0W8 520 aaKnown RBP17.72■□□□□ 0.43
SEMA4B-215ENST00000560089 BPIFA1Q9NP55 256 aa17.72■□□□□ 0.43
SEMA4B-215ENST00000560089 MRPS30Q9NP92 439 aaKnown RBP17.72■□□□□ 0.43
SEMA4B-215ENST00000560089 MOKQ9UQ07 419 aa17.72■□□□□ 0.43
SEMA4B-215ENST00000560089 KDM4EB2RXH2 506 aaPredicted RBP17.71■□□□□ 0.43
SEMA4B-215ENST00000560089 GPR39O43194 453 aa17.71■□□□□ 0.43
SEMA4B-215ENST00000560089 HOXA2O43364 376 aa17.71■□□□□ 0.43
SEMA4B-215ENST00000560089 TRIM40Q6P9F5 258 aa17.71■□□□□ 0.43
SEMA4B-215ENST00000560089 PARGQ86W56 976 aa17.71■□□□□ 0.43
SEMA4B-215ENST00000560089 ZNF671Q8TAW3 534 aa17.71■□□□□ 0.43
SEMA4B-215ENST00000560089 SMIM14Q96QK8 99 aa17.71■□□□□ 0.43
SEMA4B-215ENST00000560089 PLA2G12AQ9BZM1 189 aa17.71■□□□□ 0.43
SEMA4B-215ENST00000560089 NPFFR2Q9Y5X5 522 aa17.71■□□□□ 0.43
SEMA4B-215ENST00000560089 hCG_1809904A0A1W2PP81 198 aa17.71■□□□□ 0.43
SEMA4B-215ENST00000560089 A0A1W2PR64 198 aa17.71■□□□□ 0.43
SEMA4B-215ENST00000560089 A0A1W2PRV1 198 aa17.71■□□□□ 0.43
SEMA4B-215ENST00000560089 NUDT19A8MXV4 375 aa17.71■□□□□ 0.43
SEMA4B-215ENST00000560089 GABARAPH6UMI1 98 aa17.71■□□□□ 0.43
SEMA4B-215ENST00000560089 ADRB3P13945 408 aa17.71■□□□□ 0.43
SEMA4B-215ENST00000560089 RAB5AP20339 215 aa17.71■□□□□ 0.43
SEMA4B-215ENST00000560089 MMP11P24347 488 aa17.71■□□□□ 0.43
SEMA4B-215ENST00000560089 PTGER3P43115 390 aa17.71■□□□□ 0.43
SEMA4B-215ENST00000560089 PCBP3P57721 371 aaKnown RBP17.71■□□□□ 0.43
SEMA4B-215ENST00000560089 DHCR24Q15392 516 aa17.71■□□□□ 0.43
SEMA4B-215ENST00000560089 CSRP2Q16527 193 aa17.71■□□□□ 0.43
SEMA4B-215ENST00000560089 PTRHD1Q6GMV3 140 aaKnown RBP17.71■□□□□ 0.43
SEMA4B-215ENST00000560089 SLC36A1Q7Z2H8 476 aa17.71■□□□□ 0.43
SEMA4B-215ENST00000560089 BRIX1Q8TDN6 353 aaKnown RBP17.71■□□□□ 0.43
SEMA4B-215ENST00000560089 FCAMRQ8WWV6 532 aa17.71■□□□□ 0.43
SEMA4B-215ENST00000560089 FCRL4Q96PJ5 515 aa17.71■□□□□ 0.43
SEMA4B-215ENST00000560089 MESP1Q9BRJ9 268 aa17.71■□□□□ 0.43
SEMA4B-215ENST00000560089 EGLN3Q9H6Z9 239 aa17.71■□□□□ 0.43
SEMA4B-215ENST00000560089 RPS10P5Q9NQ39 176 aa17.71■□□□□ 0.43
SEMA4B-215ENST00000560089 CKAP5Q14008 2032 aa17.71■□□□□ 0.43
SEMA4B-215ENST00000560089 TMEM272A0A1B0GTI8 110 aa17.71■□□□□ 0.42
SEMA4B-215ENST00000560089 IRAK2O43187 625 aa17.71■□□□□ 0.42
SEMA4B-215ENST00000560089 FGF16O43320 207 aa17.71■□□□□ 0.42
SEMA4B-215ENST00000560089 OR2F2O95006 317 aa17.71■□□□□ 0.42
SEMA4B-215ENST00000560089 ADH6P28332 368 aa17.71■□□□□ 0.42
SEMA4B-215ENST00000560089 DCTDP32321 178 aa17.71■□□□□ 0.42
SEMA4B-215ENST00000560089 PMELP40967 661 aa17.71■□□□□ 0.42
SEMA4B-215ENST00000560089 RPP30P78346 268 aaKnown RBP17.71■□□□□ 0.42
SEMA4B-215ENST00000560089 OR2F1Q13607 317 aa17.71■□□□□ 0.42
SEMA4B-215ENST00000560089 COTL1Q14019 142 aa17.71■□□□□ 0.42
SEMA4B-215ENST00000560089 SURF2Q15527 256 aaPredicted RBP17.71■□□□□ 0.42
SEMA4B-215ENST00000560089 TEAD2Q15562 447 aa17.71■□□□□ 0.42
SEMA4B-215ENST00000560089 OR8G1Q15617 311 aa17.71■□□□□ 0.42
SEMA4B-215ENST00000560089 MAPK14Q16539 360 aa17.71■□□□□ 0.42
SEMA4B-215ENST00000560089 ARTNQ5T4W7 220 aa17.71■□□□□ 0.42
SEMA4B-215ENST00000560089 ADAM5Q6NVV9 412 aa17.71■□□□□ 0.42
SEMA4B-215ENST00000560089 FIGNL1Q6PIW4 674 aa17.71■□□□□ 0.42
SEMA4B-215ENST00000560089 LINGO4Q6UY18 593 aa17.71■□□□□ 0.42
SEMA4B-215ENST00000560089 OR2G2Q8NGZ5 317 aa17.71■□□□□ 0.42
SEMA4B-215ENST00000560089 RFKQ969G6 155 aa17.71■□□□□ 0.42
SEMA4B-215ENST00000560089 TMEM121BQ9BXQ6 578 aaPredicted RBP17.71■□□□□ 0.42
SEMA4B-215ENST00000560089 CIPCQ9C0C6 399 aa17.71■□□□□ 0.42
SEMA4B-215ENST00000560089 CHST5Q9GZS9 411 aa17.71■□□□□ 0.42
SEMA4B-215ENST00000560089 TAS2R10Q9NYW0 307 aa17.71■□□□□ 0.42
SEMA4B-215ENST00000560089 F5H0A9 414 aaPredicted RBP17.7■□□□□ 0.42
SEMA4B-215ENST00000560089 H7C0S8 307 aa17.7■□□□□ 0.42
SEMA4B-215ENST00000560089 EMC8O43402 210 aa17.7■□□□□ 0.42
SEMA4B-215ENST00000560089 VNN2O95498 520 aa17.7■□□□□ 0.42
SEMA4B-215ENST00000560089 MAT2AP31153 395 aaKnown RBP17.7■□□□□ 0.42
SEMA4B-215ENST00000560089 NRG3P56975 720 aa17.7■□□□□ 0.42
SEMA4B-215ENST00000560089 FZD5Q13467 585 aa17.7■□□□□ 0.42
SEMA4B-215ENST00000560089 GAMTQ14353 236 aa17.7■□□□□ 0.42
SEMA4B-215ENST00000560089 OR10K2Q6IF99 312 aa17.7■□□□□ 0.42
SEMA4B-215ENST00000560089 RBM45Q8IUH3 476 aaKnown RBP17.7■□□□□ 0.42
SEMA4B-215ENST00000560089 CMTM4Q8IZR5 234 aa17.7■□□□□ 0.42
SEMA4B-215ENST00000560089 OR6X1Q8NH79 312 aa17.7■□□□□ 0.42
SEMA4B-215ENST00000560089 RBM18Q96H35 190 aaKnown RBP17.7■□□□□ 0.42
SEMA4B-215ENST00000560089 RHBGQ9H310 441 aa17.7■□□□□ 0.42
SEMA4B-215ENST00000560089 SEC61A2Q9H9S3 476 aa17.7■□□□□ 0.42
SEMA4B-215ENST00000560089 MMP26Q9NRE1 261 aa17.7■□□□□ 0.42
SEMA4B-215ENST00000560089 GAR1Q9NY12 217 aaKnown RBP17.7■□□□□ 0.42
SEMA4B-215ENST00000560089 GULP1Q9UBP9 304 aa17.7■□□□□ 0.42
SEMA4B-215ENST00000560089 CEP290O15078 2479 aa17.7■□□□□ 0.42
SEMA4B-215ENST00000560089 KCNE1BA0A087WTH5 132 aa17.7■□□□□ 0.42
SEMA4B-215ENST00000560089 OR2AT4A6NND4 320 aa17.7■□□□□ 0.42
SEMA4B-215ENST00000560089 NARSO43776 548 aaKnown RBP17.7■□□□□ 0.42
SEMA4B-215ENST00000560089 TYRP1P17643 537 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms